RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 INTS5Q6P9B9 1019 aaKnown RBP13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 STMN2Q93045 179 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 REEP2Q9BRK0 252 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 MTMR4Q9NYA4 1195 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 GINS2Q9Y248 185 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 ADAMTS3O15072 1205 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 CASP4P49662 377 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 PMS2P54278 862 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 KCNK18Q7Z418 384 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 METTL13Q8N6R0 699 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 USP38Q8NB14 1042 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 EVI5O60447 810 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 KRT19P08727 400 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 ITGA4P13612 1032 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 HSD17B3P37058 310 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 PASD1Q8IV76 773 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 SLC35G2Q8TBE7 412 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 FLT1P17948 1338 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 PEX3P56589 373 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 PPP2R5EQ16537 467 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 SBK1Q52WX2 424 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 TEKT3Q9BXF9 490 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 NARFQ9UHQ1 456 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 ANAPC5Q9UJX4 755 aa13.42□□□□□ -0.26
SNRNP48-201ENST00000342415 FOSP01100 380 aaPredicted RBP13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 SLC8A1P32418 973 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 NSFP46459 744 aaKnown RBP13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 NAB2Q15742 525 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 KLHDC7AQ5VTJ3 777 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 BSPRYQ5W0U4 402 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 CENPPQ6IPU0 288 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 LARGE2Q8N3Y3 721 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 SMC6Q96SB8 1091 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 ANKFY1Q9P2R3 1169 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 GJA3Q9Y6H8 435 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 F5H6K3 240 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 APBA3O96018 575 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 KLRC3Q07444 240 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 SF3B3Q15393 1217 aaKnown RBP13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 ZNF394Q53GI3 561 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 ANKRD20A3Q5VUR7 823 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 RPUSD2Q8IZ73 545 aaKnown RBP13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 C10orf76Q5T2E6 689 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 CCDC137Q6PK04 289 aaKnown RBP13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 SLC30A5Q8TAD4 765 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 CYFIP2Q96F07 1278 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 CCDC17Q96LX7 622 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 FAM167BQ9BTA0 163 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 TDRD3Q9H7E2 651 aaKnown RBP13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 OSGEPQ9NPF4 335 aa13.41□□□□□ -0.26
SNRNP48-201ENST00000342415 DESP17661 470 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 NBPF9Q3BBW0 867 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 FYB2Q5VWT5 728 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 RPAINQ86UA6 219 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 MYCBPAPQ8TBZ2 947 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 CHMP6Q96FZ7 201 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 PRMT1Q99873 361 aaKnown RBP13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 C1orf112Q9NSG2 853 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 ANAPC7Q9UJX3 599 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 CCPG1Q9ULG6 757 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 JCADQ9P266 1359 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 EIF2AK2P19525 551 aaKnown RBP13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 PPP2R5DQ14738 602 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 PTGISQ16647 500 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 SYDE2Q5VT97 1194 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 RCSD1Q6JBY9 416 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 SUPT20HQ8NEM7 779 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 CNKSR2Q8WXI2 1034 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 SAAL1Q96ER3 474 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 NT5C1BQ96P26 610 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 NACC1Q96RE7 527 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 INTUQ9ULD6 942 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 GOLGA8SH3BPF8 625 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 GOLGA8MH3BSY2 632 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 PPIP5K2O43314 1243 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 PDIA5Q14554 519 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 CROCCP2Q86T23 111 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 CCDC89Q8N998 374 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 JMJD4Q9H9V9 463 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 NAGPAQ9UK23 515 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 EXOC7Q9UPT5 735 aa13.4□□□□□ -0.26
SNRNP48-201ENST00000342415 PALM3A6NDB9 673 aaPredicted RBP13.39□□□□□ -0.27
SNRNP48-201ENST00000342415 RPS6KA4O75676 772 aa13.39□□□□□ -0.27
SNRNP48-201ENST00000342415 CHN1P15882 459 aa13.39□□□□□ -0.27
SNRNP48-201ENST00000342415 STRN3Q13033 797 aa13.39□□□□□ -0.27
SNRNP48-201ENST00000342415 PPP2R5AQ15172 486 aa13.39□□□□□ -0.27
SNRNP48-201ENST00000342415 CHURC1Q8WUH1 139 aa13.39□□□□□ -0.27
SNRNP48-201ENST00000342415 RUNDC3BQ96NL0 473 aa13.39□□□□□ -0.27
SNRNP48-201ENST00000342415 ACTR5Q9H9F9 607 aaPredicted RBP13.39□□□□□ -0.27
SNRNP48-201ENST00000342415 TYW1Q9NV66 732 aaKnown RBP13.39□□□□□ -0.27
SNRNP48-201ENST00000342415 SCAF8Q9UPN6 1271 aaKnown RBP13.39□□□□□ -0.27
SNRNP48-201ENST00000342415 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.39□□□□□ -0.27
SNRNP48-201ENST00000342415 PPEF1O14829 653 aaPredicted RBP13.39□□□□□ -0.27
SNRNP48-201ENST00000342415 LONRF1Q17RB8 773 aa13.39□□□□□ -0.27
SNRNP48-201ENST00000342415 EPC2Q52LR7 807 aa13.39□□□□□ -0.27
SNRNP48-201ENST00000342415 PPP4R3CPQ6ZMV5 832 aa13.39□□□□□ -0.27
SNRNP48-201ENST00000342415 KIF2BQ8N4N8 673 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms