RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 CDR2Q01850 454 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 ITIH3Q06033 890 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 KLC1Q07866 573 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 TTBK2Q6IQ55 1244 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 FGD4Q96M96 766 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 GOLGA8SH3BPF8 625 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 GOLGA8MH3BSY2 632 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 ATP6V1G2O95670 118 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 MAP7D1Q3KQU3 841 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 GRAMD1BQ3KR37 738 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 EAPPQ56P03 285 aaPredicted RBP13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 SUSD4Q5VX71 490 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 SYT2Q8N9I0 419 aaPredicted RBP13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 STXBP3O00186 592 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 PLS3P13797 630 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 SLC8A3P57103 927 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 TRADDQ15628 312 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 PROM2Q8N271 834 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 PCDHA6Q9UN73 950 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 REXO2Q9Y3B8 237 aaKnown RBP13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 PCDHA8Q9Y5H6 950 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 OVOS2A0A0J9YW53 1432 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 POTEFA5A3E0 1075 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 KIF3CO14782 793 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 FTLP02792 175 aaPredicted RBP13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 POTEIP0CG38 1075 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 RWDD2BP57060 319 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 LRRC36Q1X8D7 754 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 BBS9Q3SYG4 887 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 NT5DC1Q5TFE4 455 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 KLHDC7AQ5VTJ3 777 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 OVOS2Q6IE36 1432 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 POTEGQ6S5H5 508 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 POTEEQ6S8J3 1075 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 DGKHQ86XP1 1220 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 RAB20Q9NX57 234 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 DCTN3O75935 186 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 HSPA9P38646 679 aaKnown RBP13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 MTM1Q13496 603 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 PLCB4Q15147 1175 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 EPS8L3Q8TE67 593 aaKnown RBP13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 SREK1Q8WXA9 508 aaKnown RBP13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 CAVIN3Q969G5 261 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 SETSIPP0DME0 302 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 RFC1P35251 1148 aaPredicted RBP13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 ERVK-9P63128 1117 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 KYNUQ16719 465 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 CEP70Q8NHQ1 597 aa13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 PPARGC1AQ9UBK2 798 aaKnown RBP13.47□□□□□ -0.25
SSX2IP-201ENST00000342203 USP17L15C9J2P7 530 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 USP17L13C9JLJ4 530 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 USP17L11C9JVI0 530 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 USP17L18D6R9N7 530 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 USP17L22D6RA61 530 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 USP17L17D6RBQ6 530 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 USP17L19D6RCP7 530 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 USP17L20D6RJB6 530 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 NR3C1P04150 777 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 STAT3P40763 770 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 NSFP46459 744 aaKnown RBP13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 KCNQ4P56696 695 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 USP17L24Q0WX57 530 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 PDXDC2PQ6P474 469 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 USP17L6PQ6QN14 398 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 TRIM59Q8IWR1 403 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 FAM161BQ96MY7 647 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 ISCA1Q9BUE6 129 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 TRPC6Q9Y210 931 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 DEPDC5O75140 1603 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 GOLGA8IPA6NC78 632 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 GOLGA8JA6NMD2 632 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 UCHL3P15374 230 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 PHBP35232 272 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 USP11P51784 963 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 SKOR1P84550 965 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 PPP2R5CQ13362 524 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 TMED8Q6PL24 325 aaPredicted RBP13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 BARGINQ6ZT62 677 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 JAMLQ86YT9 394 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 CPXCR1Q8N123 301 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 SYNGAP1Q96PV0 1343 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 A2ML1A8K2U0 1454 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 CEP170BQ9Y4F5 1589 aaPredicted RBP13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 FANCGO15287 622 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 AGTP01019 485 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 INHBAP08476 426 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 NQO1P15559 274 aaKnown RBP13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 SH2D4BQ5SQS7 431 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 WDR59Q6PJI9 974 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 FBXO25Q8TCJ0 367 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 TEKT4Q8WW24 435 aa13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 PRCCQ92733 491 aaPredicted RBP13.46□□□□□ -0.25
SSX2IP-201ENST00000342203 NRXN1Q9ULB1 1477 aa13.46□□□□□ -0.26
SSX2IP-201ENST00000342203 RCAN1P53805 252 aa13.46□□□□□ -0.26
SSX2IP-201ENST00000342203 RNF207Q6ZRF8 634 aa13.46□□□□□ -0.26
SSX2IP-201ENST00000342203 BRIP1Q9BX63 1249 aa13.46□□□□□ -0.26
SSX2IP-201ENST00000342203 SMYD3Q9H7B4 428 aa13.46□□□□□ -0.26
SSX2IP-201ENST00000342203 FAM53CQ9NYF3 392 aa13.46□□□□□ -0.26
SSX2IP-201ENST00000342203 RTCBQ9Y3I0 505 aaKnown RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms