RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 BAG6P46379 1132 aa16.69■□□□□ 0.26
LIMK2-203ENST00000340552 ATP2C1P98194 919 aaPredicted RBP16.69■□□□□ 0.26
LIMK2-203ENST00000340552 NUGGCQ68CJ6 796 aa16.69■□□□□ 0.26
LIMK2-203ENST00000340552 RNF10Q8N5U6 811 aaKnown RBP16.69■□□□□ 0.26
LIMK2-203ENST00000340552 PAIP2Q9BPZ3 127 aaKnown RBP16.69■□□□□ 0.26
LIMK2-203ENST00000340552 NOC4LQ9BVI4 516 aaKnown RBP16.69■□□□□ 0.26
LIMK2-203ENST00000340552 SAMD15Q9P1V8 674 aa16.69■□□□□ 0.26
LIMK2-203ENST00000340552 STX8Q9UNK0 236 aa16.69■□□□□ 0.26
LIMK2-203ENST00000340552 ASB3Q9Y575 518 aa16.69■□□□□ 0.26
LIMK2-203ENST00000340552 COQ9O75208 318 aa16.69■□□□□ 0.26
LIMK2-203ENST00000340552 CACNA2D4Q7Z3S7 1137 aa16.69■□□□□ 0.26
LIMK2-203ENST00000340552 ARHGAP22Q7Z5H3 698 aa16.69■□□□□ 0.26
LIMK2-203ENST00000340552 GORASP1Q9BQQ3 440 aa16.69■□□□□ 0.26
LIMK2-203ENST00000340552 SYT15Q9BQS2 421 aa16.69■□□□□ 0.26
LIMK2-203ENST00000340552 FAM207AQ9NSI2 230 aaPredicted RBP16.69■□□□□ 0.26
LIMK2-203ENST00000340552 PSMA7O14818 248 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 SHBGP04278 402 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 MSH2P43246 934 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 USP4Q13107 963 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 MTMR3Q13615 1198 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 TTC38Q5R3I4 469 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 HHIPL2Q6UWX4 724 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 TEKT1Q969V4 418 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 USP40Q9NVE5 1235 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 SNED1Q8TER0 1413 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 SCN9AQ15858 1988 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 LRRC53A6NM62 1247 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 F8VZ95 297 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 ECE2O60344 883 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 NPTXRO95502 500 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 KRT2P35908 639 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 EHHADHQ08426 723 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 ADAM9Q13443 819 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 SEPT2Q15019 361 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 ASTE1Q2TB18 679 aaPredicted RBP16.68■□□□□ 0.26
LIMK2-203ENST00000340552 TMC3Q7Z5M5 1100 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 C7orf43Q8WVR3 580 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 KLHL29Q96CT2 875 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 PHF20Q9BVI0 1012 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 DDX4Q9NQI0 724 aaKnown RBP16.68■□□□□ 0.26
LIMK2-203ENST00000340552 WDR35Q9P2L0 1181 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 ADAMTSL1Q8N6G6 1762 aa16.68■□□□□ 0.26
LIMK2-203ENST00000340552 BHMG1C9JSJ3 638 aaPredicted RBP16.67■□□□□ 0.26
LIMK2-203ENST00000340552 BMP15O95972 392 aa16.67■□□□□ 0.26
LIMK2-203ENST00000340552 PDIA5Q14554 519 aa16.67■□□□□ 0.26
LIMK2-203ENST00000340552 GALNTL6Q49A17 601 aa16.67■□□□□ 0.26
LIMK2-203ENST00000340552 MEI1Q5TIA1 1274 aa16.67■□□□□ 0.26
LIMK2-203ENST00000340552 ZSCAN29Q8IWY8 852 aaPredicted RBP16.67■□□□□ 0.26
LIMK2-203ENST00000340552 SELENOSQ9BQE4 189 aa16.67■□□□□ 0.26
LIMK2-203ENST00000340552 TMEM47Q9BQJ4 181 aa16.67■□□□□ 0.26
LIMK2-203ENST00000340552 MOV10L1Q9BXT6 1211 aaKnown RBP16.67■□□□□ 0.26
LIMK2-203ENST00000340552 ADAM7Q9H2U9 754 aa16.67■□□□□ 0.26
LIMK2-203ENST00000340552 CHCHD3Q9NX63 227 aaKnown RBP16.67■□□□□ 0.26
LIMK2-203ENST00000340552 STRIP1Q5VSL9 837 aa16.67■□□□□ 0.26
LIMK2-203ENST00000340552 NEDD1Q8NHV4 660 aa16.67■□□□□ 0.26
LIMK2-203ENST00000340552 TRIM33Q9UPN9 1127 aa16.67■□□□□ 0.26
LIMK2-203ENST00000340552 KLRC4O43908 158 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 PDHA1P08559 390 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 RRAGAQ7L523 313 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 KIAA0825Q8IV33 1275 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 STAG2Q8N3U4 1231 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 ZNF513Q8N8E2 541 aaPredicted RBP16.66■□□□□ 0.26
LIMK2-203ENST00000340552 ARHGEF3Q9NR81 526 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 NKX1-2Q9UD57 310 aaPredicted RBP16.66■□□□□ 0.26
LIMK2-203ENST00000340552 CD2APQ9Y5K6 639 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 DAPK3O43293 454 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 VIMP08670 466 aaKnown RBP16.66■□□□□ 0.26
LIMK2-203ENST00000340552 ALDH3A1P30838 453 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 CRKP46108 304 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 GRM4Q14833 912 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 AOC3Q16853 763 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 APOBEC3HQ6NTF7 200 aaKnown RBP16.66■□□□□ 0.26
LIMK2-203ENST00000340552 CDC42EP5Q6NZY7 148 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 FAM81AQ8TBF8 368 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 RBM41Q96IZ5 413 aaKnown RBP16.66■□□□□ 0.26
LIMK2-203ENST00000340552 ZMYND8Q9ULU4 1186 aaPredicted RBP16.66■□□□□ 0.26
LIMK2-203ENST00000340552 MTMR7Q9Y216 660 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 SIK3Q9Y2K2 1263 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 SCG2P13521 617 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 DHX9Q08211 1270 aaKnown RBP16.66■□□□□ 0.26
LIMK2-203ENST00000340552 ANKRD40Q6AI12 368 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 PRMT1Q99873 361 aaKnown RBP16.66■□□□□ 0.26
LIMK2-203ENST00000340552 LRRC42Q9Y546 428 aa16.66■□□□□ 0.26
LIMK2-203ENST00000340552 FAM163BP0C2L3 166 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 CNGA1P29973 690 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 STAT6P42226 847 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 ZNF131P52739 623 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 COPS2P61201 443 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 MRPS35P82673 323 aaKnown RBP16.65■□□□□ 0.26
LIMK2-203ENST00000340552 LACTBP83111 547 aaPredicted RBP16.65■□□□□ 0.26
LIMK2-203ENST00000340552 DACT2Q5SW24 774 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 GIMAP8Q8ND71 665 aaPredicted RBP16.65■□□□□ 0.26
LIMK2-203ENST00000340552 PBKQ96KB5 322 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 MAD2L2Q9UI95 211 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 GOLGA6L10A0A0M3HER8 536 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 GNAZP19086 355 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 KLRC1P26715 233 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 MMP13P45452 471 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 ATP11AP98196 1134 aa16.65■□□□□ 0.26
LIMK2-203ENST00000340552 BNIP1Q12981 228 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms