RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 EMC2Q15006 297 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 ZFPM1Q8IX07 1006 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 SYCE1Q8N0S2 351 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 IFT122Q9HBG6 1241 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 CYP27A1Q02318 531 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 UBE2TQ9NPD8 197 aaPredicted RBP13.9□□□□□ -0.18
LIN54-201ENST00000340417 PAXBP1Q9Y5B6 917 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 HOXA2O43364 376 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 CA12O43570 354 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 SMARCA1P28370 1054 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 ADGRA1Q86SQ6 560 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 TLK2Q86UE8 772 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 CCDC25Q86WR0 208 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 GLYCTKQ8IVS8 523 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 SH2D3AQ9BRG2 576 aa13.9□□□□□ -0.18
LIN54-201ENST00000340417 IGFBP4P22692 258 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 STOX1Q6ZVD7 989 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 XXYLT1Q8NBI6 393 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 DNERQ8NFT8 737 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 CHD2O14647 1828 aaKnown RBP13.89□□□□□ -0.19
LIN54-201ENST00000340417 CTAGE15A4D2H0 777 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 CTAGE8P0CG41 777 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 ACVR2BQ13705 512 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 CTAGE6Q86UF2 777 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 CTAGE4Q8IX94 777 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 FAM198AQ9UFP1 575 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 TUBE1Q9UJT0 475 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 LRRN2O75325 713 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 HOXA7P31268 230 aaPredicted RBP13.89□□□□□ -0.19
LIN54-201ENST00000340417 NLRP11P59045 1033 aaKnown RBP13.89□□□□□ -0.19
LIN54-201ENST00000340417 TEX2Q8IWB9 1127 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 CERS5Q8N5B7 392 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 SAMD3Q8N6K7 520 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 CD99L2Q8TCZ2 262 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 DNAI1Q9UI46 699 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 MSRAQ9UJ68 235 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 ACTR2P61160 394 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 BSPRYQ5W0U4 402 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 INTS8Q75QN2 995 aaKnown RBP13.89□□□□□ -0.19
LIN54-201ENST00000340417 SMYD4Q8IYR2 804 aaPredicted RBP13.89□□□□□ -0.19
LIN54-201ENST00000340417 MAP3K14Q99558 947 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 ZNF142P52746 1687 aaPredicted RBP13.89□□□□□ -0.19
LIN54-201ENST00000340417 SPATA1Q5VX52 437 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 CASC4Q6P4E1 433 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 CCDC89Q8N998 374 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 FAM163AQ96GL9 167 aaPredicted RBP13.89□□□□□ -0.19
LIN54-201ENST00000340417 CBX8Q9HC52 389 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 VTA1Q9NP79 307 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 SEL1LQ9UBV2 794 aa13.89□□□□□ -0.19
LIN54-201ENST00000340417 PPP4R3CPQ6ZMV5 832 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 CGNQ9P2M7 1197 aaKnown RBP13.88□□□□□ -0.19
LIN54-201ENST00000340417 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.88□□□□□ -0.19
LIN54-201ENST00000340417 ZSCAN30Q86W11 494 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 PROM2Q8N271 834 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 TSPYL1Q9H0U9 437 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 PPANQ9NQ55 473 aaKnown RBP13.88□□□□□ -0.19
LIN54-201ENST00000340417 FAM217BQ9NTX9 383 aaPredicted RBP13.88□□□□□ -0.19
LIN54-201ENST00000340417 GCNT4Q9P109 453 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 PCDHA5Q9Y5H7 936 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 OAZ1P54368 228 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 MAP7D3Q8IWC1 876 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 HAUS1Q96CS2 278 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 RIT2Q99578 217 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 TIPINQ9BVW5 301 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 SLC38A7Q9NVC3 462 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 MAD2L2Q9UI95 211 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 AGO2Q9UKV8 859 aaKnown RBP13.88□□□□□ -0.19
LIN54-201ENST00000340417 PCDHAC2Q9Y5I4 1007 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 SYNGAP1Q96PV0 1343 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 SLC15A5A6NIM6 579 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 UNC13DQ70J99 1090 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 DEFB118Q96PH6 123 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 TRPC7Q9HCX4 862 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 MTRF1LQ9UGC7 380 aaKnown RBP13.88□□□□□ -0.19
LIN54-201ENST00000340417 EYA4O95677 639 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 ZNF18P17022 549 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 CUL4BQ13620 913 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 ZNF484Q5JVG2 852 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 ODF2LQ9ULJ1 636 aa13.88□□□□□ -0.19
LIN54-201ENST00000340417 TBX3O15119 743 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 RECQLP46063 649 aaPredicted RBP13.87□□□□□ -0.19
LIN54-201ENST00000340417 CTCFP49711 727 aaPredicted RBP13.87□□□□□ -0.19
LIN54-201ENST00000340417 FSCN1Q16658 493 aaKnown RBP13.87□□□□□ -0.19
LIN54-201ENST00000340417 SPATA2LQ8IUW3 424 aaPredicted RBP13.87□□□□□ -0.19
LIN54-201ENST00000340417 PAGE5Q96GU1 130 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 TUBGCP2Q9BSJ2 902 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 PXMP2Q9NR77 195 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 NFIBO00712 420 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 ZBTB48P10074 688 aaPredicted RBP13.87□□□□□ -0.19
LIN54-201ENST00000340417 GBP1P32455 592 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 GUCY1A2P33402 732 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 PLA2G4FQ68DD2 849 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 NOTUMQ6P988 496 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 ZNF771Q7L3S4 317 aaPredicted RBP13.87□□□□□ -0.19
LIN54-201ENST00000340417 PEX26Q7Z412 305 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 STAMBPO95630 424 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 ARL13BQ3SXY8 428 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 ZNF394Q53GI3 561 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 TMCO3Q6UWJ1 677 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 NECAB2Q7Z6G3 386 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms