RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 SCLT1Q96NL6 688 aa12.67□□□□□ -0.38
SLC28A1-202ENST00000338602 PBX4Q9BYU1 374 aa12.67□□□□□ -0.38
SLC28A1-202ENST00000338602 SLC28A3Q9HAS3 691 aa12.67□□□□□ -0.38
SLC28A1-202ENST00000338602 CYP26B1Q9NR63 512 aa12.67□□□□□ -0.38
SLC28A1-202ENST00000338602 GPR182O15218 404 aa12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 TLL1O43897 1013 aa12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 GAS2O43903 313 aaKnown RBP12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 RPS6KA5O75582 802 aa12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 LYPLA2O95372 231 aa12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 XRCC6P12956 609 aaKnown RBP eCLIP12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 PDIA4P13667 645 aaKnown RBP12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 PLA2G5P39877 138 aa12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 CLCN3P51790 818 aa12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 POLGP54098 1239 aaPredicted RBP12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 PTGDRQ13258 359 aa12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 PDIA5Q14554 519 aa12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 XKR9Q5GH70 373 aa12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 DTHD1Q6ZMT9 781 aa12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 ANO5Q75V66 913 aa12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 LRRC71Q8N4P6 559 aa12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 HSD17B14Q9BPX1 270 aa12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 TUFT1Q9NNX1 390 aa12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 ANKEF1Q9NU02 776 aa12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 RNF216Q9NWF9 866 aaPredicted RBP12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 PCDHB6Q9Y5E3 794 aa12.66□□□□□ -0.38
SLC28A1-202ENST00000338602 TET1Q8NFU7 2136 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 POTEMA6NI47 508 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 MAFO75444 373 aaPredicted RBP12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 STBD1O95210 358 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 BMP15O95972 392 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 VTNP04004 478 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 MUTP22033 750 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 CD52P31358 61 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 PRPHP41219 470 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 TOB1P50616 345 aaPredicted RBP12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 FXR2P51116 673 aaKnown RBP eCLIP12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 NLRP11P59045 1033 aaKnown RBP12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 NFX1Q12986 1120 aaKnown RBP12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 NBR1Q14596 966 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 KIZQ2M2Z5 673 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 PLA2G4FQ68DD2 849 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 MYOCDQ8IZQ8 938 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 TCP11Q8WWU5 503 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 NLRP7Q8WX94 980 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 FAM122AQ96E09 287 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 NACC1Q96RE7 527 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 POLR3CQ9BUI4 534 aaPredicted RBP12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 SEMA6BQ9H3T3 888 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 LRWD1Q9UFC0 647 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 PADI3Q9ULW8 664 aa12.65□□□□□ -0.38
SLC28A1-202ENST00000338602 IGKV6-21A0A0C4DH24 114 aa12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 GJB5O95377 273 aa12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 SYT1P21579 422 aa12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 PBX2P40425 430 aa12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 RABGGTBP53611 331 aa12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 DEFB103AP81534 67 aa12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 PPP2R2DQ66LE6 453 aa12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 LINC01465Q8N7H1 131 aa12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 C4orf32Q8N8J7 132 aa12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 SYMPKQ92797 1274 aaKnown RBP12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 RAD9AQ99638 391 aa12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 OSMRQ99650 979 aa12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 SH2D3AQ9BRG2 576 aa12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 GCOM2Q9BZD3 368 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 INO80BQ9C086 356 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 NKX2-4Q9H2Z4 354 aa12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 ZNF576Q9H609 170 aa12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 AGO3Q9H9G7 860 aaKnown RBP12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 SUCLA2Q9P2R7 463 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 WRAP73Q9P2S5 460 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 INSL6Q9Y581 213 aa12.64□□□□□ -0.39
SLC28A1-202ENST00000338602 TMEM150BA6NC51 233 aa12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 ENPP3O14638 875 aa12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 ASAP2O43150 1006 aa12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 GPR32O75388 356 aa12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 DGAT1O75907 488 aa12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 EIF4BP23588 611 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 RPA1P27694 616 aa12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 CCT6AP40227 531 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 GPC3P51654 580 aa12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 NPEPPSP55786 919 aa12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 TCTN1Q2MV58 587 aa12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 KRT79Q5XKE5 535 aa12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 ARL6IP4Q66PJ3 421 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 ZNF410Q86VK4 478 aa12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 CATSPER3Q86XQ3 398 aa12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 RHPN2Q8IUC4 686 aa12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 PSPC1Q8WXF1 523 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 FAM161BQ96MY7 647 aa12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 PPP1R16BQ96T49 567 aa12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 MTRQ99707 1265 aa12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 DHX33Q9H6R0 707 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 RAPGEFL1Q9UHV5 662 aa12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 NOC2LQ9Y3T9 749 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 WDR81Q562E7 1941 aa12.63□□□□□ -0.39
SLC28A1-202ENST00000338602 EVPLQ92817 2033 aa12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 DENND3A2RUS2 1198 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms