RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 SNX16P57768 344 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 TFAMQ00059 246 aaKnown RBP6.81□□□□□ -1.32
PRKDC-202ENST00000338368 EXOC8Q8IYI6 725 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 MICALL1Q8N3F8 863 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 GRK7Q8WTQ7 553 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 PNMA5Q96PV4 448 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 ACAD9Q9H845 621 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 MYOZ2Q9NPC6 264 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 KCNH7Q9NS40 1196 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 RNF40O75150 1001 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 MAPK4P31152 587 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 PLAGL2Q9UPG8 496 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 GOLGA8KD6RF30 607 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 ACTN1P12814 892 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 VAMP7P51809 220 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 XKR3Q5GH77 459 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 ZNF280CQ8ND82 737 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 SLC10A4Q96EP9 437 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 TRIM11Q96F44 468 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 PCDHB4Q9Y5E5 795 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 MYH11P35749 1972 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 CCDC188H7C350 402 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 CLDN3O15551 220 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 RPS12P25398 132 aaKnown RBP6.81□□□□□ -1.32
PRKDC-202ENST00000338368 VPS41P49754 854 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 NPEPPSP55786 919 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 UHMK1Q8TAS1 419 aaKnown RBP6.81□□□□□ -1.32
PRKDC-202ENST00000338368 ZNF384Q8TF68 577 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 MMS19Q96T76 1030 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 MRIQ9BWK5 157 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 MED4Q9NPJ6 270 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 HESX1Q9UBX0 185 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 NOD1Q9Y239 953 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 NCK2O43639 380 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 IFNB1P01574 187 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 EZRP15311 586 aaKnown RBP6.81□□□□□ -1.32
PRKDC-202ENST00000338368 KCTD16Q68DU8 428 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 CC2D1AQ6P1N0 951 aaPredicted RBP6.81□□□□□ -1.32
PRKDC-202ENST00000338368 IPO4Q8TEX9 1081 aaKnown RBP6.81□□□□□ -1.32
PRKDC-202ENST00000338368 FAM213AQ9BRX8 229 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 MSH4O15457 936 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 SLC26A4O43511 780 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 SRGAP2CP0DJJ0 459 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 BMP6P22004 513 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 PRAMEF18Q5VWM3 479 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 SLFN12LQ6IEE8 588 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 BLOC1S4Q9NUP1 217 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 NXF1Q9UBU9 619 aaKnown RBP6.81□□□□□ -1.32
PRKDC-202ENST00000338368 C19orf81C9J6K1 198 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 MAFGO15525 162 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 RNF8O76064 485 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 ADCY8P40145 1251 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 KRT39Q6A163 491 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 PHLDB2Q86SQ0 1253 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 RNF181Q9P0P0 153 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 TACC3Q9Y6A5 838 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 EMSYQ7Z589 1322 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 GOLGA4Q13439 2230 aaKnown RBP6.81□□□□□ -1.32
PRKDC-202ENST00000338368 KLK7P49862 253 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 YARSP54577 528 aaKnown RBP6.81□□□□□ -1.32
PRKDC-202ENST00000338368 FIGNQ5HY92 759 aa6.81□□□□□ -1.32
PRKDC-202ENST00000338368 FER1L4A9Z1Z3 1794 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 LLGL1Q15334 1064 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 SAAL1Q96ER3 474 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 NLRP4Q96MN2 994 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 POLR3CQ9BUI4 534 aaPredicted RBP6.8□□□□□ -1.32
PRKDC-202ENST00000338368 TEX13BQ9BXU2 312 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 PLTPP55058 493 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 AP1M1Q9BXS5 423 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 RAB20Q9NX57 234 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 CTNND1O60716 968 aaKnown RBP6.8□□□□□ -1.32
PRKDC-202ENST00000338368 DRAP1Q14919 205 aaPredicted RBP6.8□□□□□ -1.32
PRKDC-202ENST00000338368 ANGEL2Q5VTE6 544 aaKnown RBP6.8□□□□□ -1.32
PRKDC-202ENST00000338368 SCYL2Q6P3W7 929 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 NFRKBQ6P4R8 1299 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 MKL1Q969V6 931 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 NKIRAS1Q9NYS0 192 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 SREBF1P36956 1147 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 GMPSP49915 693 aaPredicted RBP6.8□□□□□ -1.32
PRKDC-202ENST00000338368 ZSCAN26Q16670 478 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 BCAS4Q8TDM0 211 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 FAM198AQ9UFP1 575 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 ZNF148Q9UQR1 794 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 MRPS25P82663 173 aaKnown RBP6.8□□□□□ -1.32
PRKDC-202ENST00000338368 GLE1Q53GS7 698 aaKnown RBP6.8□□□□□ -1.32
PRKDC-202ENST00000338368 OSBPL9Q96SU4 736 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 ATRNO75882 1429 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 PSMC6P62333 389 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 NBPF9Q3BBW0 867 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 SCYL3Q8IZE3 742 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 GMCL1P1Q8NEA9 526 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 ANKRD36BP1Q96IX9 119 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 CAPS2Q9BXY5 557 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 SEMA6BQ9H3T3 888 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 ZNF302Q9NR11 478 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 AKT3Q9Y243 479 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 ARP10275 920 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 ATP1A2P50993 1020 aa6.8□□□□□ -1.32
PRKDC-202ENST00000338368 PMS1P54277 932 aaKnown RBP6.8□□□□□ -1.32
PRKDC-202ENST00000338368 E2F4Q16254 413 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms