RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 PPP2R2AP63151 447 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 SPARCL1Q14515 664 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 NR1I3Q14994 352 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 PADI6Q6TGC4 694 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 DCLK2Q8N568 766 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.76□□□□□ -0.05
RTN4-202ENST00000337526 TC2NQ8N9U0 490 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 THOC1Q96FV9 657 aaKnown RBP14.76□□□□□ -0.05
RTN4-202ENST00000337526 SAYSD1Q9NPB0 183 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 GINM1Q9NU53 330 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 SNX12Q9UMY4 172 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 RNF17Q9BXT8 1623 aaKnown RBP14.76□□□□□ -0.05
RTN4-202ENST00000337526 GRID2IPA4D2P6 1211 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 ICE2Q659A1 982 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 RASGRP2Q7LDG7 609 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 SRRM1Q8IYB3 904 aaKnown RBP14.76□□□□□ -0.05
RTN4-202ENST00000337526 MCUQ8NE86 351 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 TOM1L1O75674 476 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 TJP3O95049 919 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 CCND2P30279 289 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 BEND6Q5SZJ8 279 aaPredicted RBP14.76□□□□□ -0.05
RTN4-202ENST00000337526 ZNF772Q68DY9 489 aaPredicted RBP14.76□□□□□ -0.05
RTN4-202ENST00000337526 ADSSL1Q8N142 457 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 NEDD1Q8NHV4 660 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 ANKRD7Q92527 254 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 LRRC1Q9BTT6 524 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 MSTO1Q9BUK6 570 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 NRKQ7Z2Y5 1582 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 PLS3P13797 630 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 HDLBPQ00341 1268 aaKnown RBP14.76□□□□□ -0.05
RTN4-202ENST00000337526 ZNF394Q53GI3 561 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 BRINP3Q76B58 766 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 GLYCTKQ8IVS8 523 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 N4BP2L2Q92802 583 aaPredicted RBP14.76□□□□□ -0.05
RTN4-202ENST00000337526 HDAC11Q96DB2 347 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 SPC25Q9HBM1 224 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 NARFQ9UHQ1 456 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 PTPRMP28827 1452 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 FAM196BA6NMK8 535 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 CLGNO14967 610 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 FTLP02792 175 aaPredicted RBP14.75□□□□□ -0.05
RTN4-202ENST00000337526 PMS2P54278 862 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 JADE1Q6IE81 842 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 SLFN12LQ6IEE8 588 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 SULF1Q8IWU6 871 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 ATP6V1G3Q96LB4 118 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 SLC38A10Q9HBR0 1119 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 PRPSAP1Q14558 356 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 HSP90AA5PQ58FG0 334 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 PPP1R18Q6NYC8 613 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 RAD9BQ6WBX8 426 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 SCARA5Q6ZMJ2 495 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 EEPD1Q7L9B9 569 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 ALKQ9UM73 1620 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 IQANK1A0A1B0GTG1 560 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 ZBED1O96006 694 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 ASNSP08243 561 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 PRELPP51888 382 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 QRICH1Q2TAL8 776 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 NBPF9Q3BBW0 867 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 PDXDC1Q6P996 788 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 BANK1Q8NDB2 785 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 HPS3Q969F9 1004 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 SPATS2LQ9NUQ6 558 aaKnown RBP14.75□□□□□ -0.05
RTN4-202ENST00000337526 TLK1Q9UKI8 766 aa14.75□□□□□ -0.05
RTN4-202ENST00000337526 TRPC5Q9UL62 973 aaPredicted RBP14.75□□□□□ -0.05
RTN4-202ENST00000337526 SRGAP2CP0DJJ0 459 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 ANTXR2P58335 489 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 ZNF746Q6NUN9 644 aaPredicted RBP14.74□□□□□ -0.05
RTN4-202ENST00000337526 RNF207Q6ZRF8 634 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 PPWD1Q96BP3 646 aaKnown RBP14.74□□□□□ -0.05
RTN4-202ENST00000337526 PHF20Q9BVI0 1012 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 TRIM4Q9C037 500 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 NOP53Q9NZM5 478 aaKnown RBP14.74□□□□□ -0.05
RTN4-202ENST00000337526 CTDNEP1O95476 244 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 DPYDQ12882 1025 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 PDE1CQ14123 709 aaPredicted RBP14.74□□□□□ -0.05
RTN4-202ENST00000337526 ENGASEQ8NFI3 743 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 MLXIPLQ9NP71 852 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 NGRNQ9NPE2 291 aaKnown RBP14.74□□□□□ -0.05
RTN4-202ENST00000337526 MADDQ8WXG6 1647 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 TMEM35BQ8NCS4 154 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 DYDC2Q96IM9 177 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 SLITRK6Q9H5Y7 841 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 AGPAT5Q9NUQ2 364 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 AMACRQ9UHK6 382 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 SCOCQ9UIL1 159 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 MROH7-TTC4A0A0A0MT08 1334 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 A0A0G2JND7 137 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 ZNF185O15231 689 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 KRT37O76014 449 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 CHRNA3P32297 505 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 SURF1Q15526 300 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 AP1ARQ63HQ0 302 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 RCSD1Q6JBY9 416 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 RSRC2Q7L4I2 434 aaKnown RBP14.74□□□□□ -0.05
RTN4-202ENST00000337526 NLRP14Q86W24 1093 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 EXOC8Q8IYI6 725 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 MAML1Q92585 1016 aa14.74□□□□□ -0.05
RTN4-202ENST00000337526 ZWILCHQ9H900 591 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms