RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 CLCN6P51797 869 aa13.99□□□□□ -0.17
HLCS-201ENST00000336648 ZNF667Q5HYK9 610 aa13.99□□□□□ -0.17
HLCS-201ENST00000336648 FAF2Q96CS3 445 aa13.99□□□□□ -0.17
HLCS-201ENST00000336648 BPIFA3Q9BQP9 254 aa13.99□□□□□ -0.17
HLCS-201ENST00000336648 PCIF1Q9H4Z3 704 aa13.99□□□□□ -0.17
HLCS-201ENST00000336648 FOXP2O15409 715 aa13.99□□□□□ -0.17
HLCS-201ENST00000336648 SERPINB2P05120 415 aa13.99□□□□□ -0.17
HLCS-201ENST00000336648 SLC12A1Q13621 1099 aa13.99□□□□□ -0.17
HLCS-201ENST00000336648 SLFNL1Q499Z3 407 aa13.99□□□□□ -0.17
HLCS-201ENST00000336648 C7orf31Q8N865 590 aa13.99□□□□□ -0.17
HLCS-201ENST00000336648 INTUQ9ULD6 942 aa13.99□□□□□ -0.17
HLCS-201ENST00000336648 PAIP2BQ9ULR5 123 aaKnown RBP13.99□□□□□ -0.17
HLCS-201ENST00000336648 MTRQ99707 1265 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 IRAK4Q9NWZ3 460 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 ADORA1P30542 326 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 MAGEA9P43362 315 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 NUGGCQ68CJ6 796 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 BRIP1Q9BX63 1249 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 L3MBTL1Q9Y468 752 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 PVALEFA0A1B0GWK0 134 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 K7ERI5 159 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 USPL1Q5W0Q7 1092 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 TOGARAM2Q6ZUX3 1019 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 ENAHQ8N8S7 591 aaPredicted RBP13.98□□□□□ -0.17
HLCS-201ENST00000336648 OR9Q1Q8NGQ5 310 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 CFLARO15519 480 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 MYBL1P10243 752 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 CRKLP46109 303 aaKnown RBP13.98□□□□□ -0.17
HLCS-201ENST00000336648 TMPRSS15P98073 1019 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 KCTD1Q719H9 257 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 THEM5Q8N1Q8 247 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 SAMSN1Q9NSI8 373 aaKnown RBP13.98□□□□□ -0.17
HLCS-201ENST00000336648 SORBS3O60504 671 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 ELF1P32519 619 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 SLCO1A2P46721 670 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 PKP1Q13835 747 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 KRT31Q15323 416 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 KIRREL3Q8IZU9 778 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 TBK1Q9UHD2 729 aa13.98□□□□□ -0.17
HLCS-201ENST00000336648 MAFGO15525 162 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 SMARCA1P28370 1054 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 RESP18Q5W5W9 173 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 PDXDC2PQ6P474 469 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 HOMEZQ8IX15 550 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 PIK3R5Q8WYR1 880 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 FBXO40Q9UH90 709 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 EIF3DO15371 548 aaKnown RBP eCLIP13.97□□□□□ -0.17
HLCS-201ENST00000336648 GYG2O15488 501 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 KRT75O95678 551 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 GGPS1O95749 300 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 FGGP02679 453 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 MTERF2Q49AM1 385 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 TBC1D9BQ66K14 1250 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 GDAP1Q8TB36 358 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 ABCB6Q9NP58 842 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 TOPORSQ9NS56 1045 aaPredicted RBP13.97□□□□□ -0.17
HLCS-201ENST00000336648 ABCA5Q8WWZ7 1642 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 CHUKO15111 745 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 KCNQ3O43525 872 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 HSPA2P54652 639 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 GPC5P78333 572 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 DRP2Q13474 957 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 KIF19Q2TAC6 998 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 SMYD4Q8IYR2 804 aaPredicted RBP13.97□□□□□ -0.17
HLCS-201ENST00000336648 CYTH2Q99418 400 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 ING2Q9H160 280 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 PNMA3Q9UL41 463 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 SNX2O60749 519 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 TBXAS1P24557 533 aaPredicted RBP13.97□□□□□ -0.17
HLCS-201ENST00000336648 DSTYKQ6XUX3 929 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 TEX9Q8N6V9 391 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 RASGRP4Q8TDF6 673 aa13.97□□□□□ -0.17
HLCS-201ENST00000336648 GNAT1P11488 350 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 CEP55Q53EZ4 464 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 GRAMD1AQ96CP6 724 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 TRIM62Q9BVG3 475 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 SAYSD1Q9NPB0 183 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 STMN3Q9NZ72 180 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 ZNF229Q9UJW7 825 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 PLAAQ9Y263 795 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 KAT6BQ8WYB5 2073 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 ATP7BP35670 1465 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 FAM187AA6NFU0 413 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 LGALS16A8MUM7 142 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 MMEP08473 750 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 FRA10AC1Q70Z53 315 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 ADAM22Q9P0K1 906 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 ASAP2O43150 1006 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 ZMYND10O75800 440 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 BLVRAP53004 296 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 MKRN3Q13064 507 aaKnown RBP13.96□□□□□ -0.17
HLCS-201ENST00000336648 TMEM179Q6ZVK1 233 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 ARMC2Q8NEN0 867 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 MAPRE2Q15555 327 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 NBPF20Q3BBV1 942 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 ENOSF1Q7L5Y1 443 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 GAS2L3Q86XJ1 694 aa13.96□□□□□ -0.17
HLCS-201ENST00000336648 NR1H4Q96RI1 486 aaPredicted RBP13.96□□□□□ -0.17
HLCS-201ENST00000336648 CHCHD3Q9NX63 227 aaKnown RBP13.96□□□□□ -0.17
HLCS-201ENST00000336648 SEL1LQ9UBV2 794 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms