RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 STK17AQ9UEE5 414 aa15.68■□□□□ 0.1
APOBEC3B-202ENST00000335760 HPSEQ9Y251 543 aa15.68■□□□□ 0.1
APOBEC3B-202ENST00000335760 ALPK3Q96L96 1907 aa15.67■□□□□ 0.1
APOBEC3B-202ENST00000335760 FAM237AA0A1B0GTK4 181 aa15.67■□□□□ 0.1
APOBEC3B-202ENST00000335760 USO1O60763 962 aaKnown RBP15.67■□□□□ 0.1
APOBEC3B-202ENST00000335760 DGAT1O75907 488 aa15.67■□□□□ 0.1
APOBEC3B-202ENST00000335760 SYKP43405 635 aa15.67■□□□□ 0.1
APOBEC3B-202ENST00000335760 SLC12A3P55017 1021 aa15.67■□□□□ 0.1
APOBEC3B-202ENST00000335760 EMC2Q15006 297 aa15.67■□□□□ 0.1
APOBEC3B-202ENST00000335760 EFCAB12Q6NXP0 572 aa15.67■□□□□ 0.1
APOBEC3B-202ENST00000335760 EXOC8Q8IYI6 725 aa15.67■□□□□ 0.1
APOBEC3B-202ENST00000335760 LRRC71Q8N4P6 559 aa15.67■□□□□ 0.1
APOBEC3B-202ENST00000335760 SYT2Q8N9I0 419 aaPredicted RBP15.67■□□□□ 0.1
APOBEC3B-202ENST00000335760 IQUBQ8NA54 791 aa15.67■□□□□ 0.1
APOBEC3B-202ENST00000335760 LARP4BQ92615 738 aaKnown RBP15.67■□□□□ 0.1
APOBEC3B-202ENST00000335760 JPH2Q9BR39 696 aaPredicted RBP15.67■□□□□ 0.1
APOBEC3B-202ENST00000335760 PYM1Q9BRP8 204 aaKnown RBP15.67■□□□□ 0.1
APOBEC3B-202ENST00000335760 FAM49AQ9H0Q0 323 aaPredicted RBP15.67■□□□□ 0.1
APOBEC3B-202ENST00000335760 SUGCTQ9HAC7 445 aa15.67■□□□□ 0.1
APOBEC3B-202ENST00000335760 IGKV6-21A0A0C4DH24 114 aa15.66■□□□□ 0.1
APOBEC3B-202ENST00000335760 SMIM35A0A1B0GVV1 85 aa15.66■□□□□ 0.1
APOBEC3B-202ENST00000335760 CLTBP09497 229 aa15.66■□□□□ 0.1
APOBEC3B-202ENST00000335760 CLCN3P51790 818 aa15.66■□□□□ 0.1
APOBEC3B-202ENST00000335760 UBE2HP62256 183 aa15.66■□□□□ 0.1
APOBEC3B-202ENST00000335760 E2F4Q16254 413 aa15.66■□□□□ 0.1
APOBEC3B-202ENST00000335760 RINT1Q6NUQ1 792 aa15.66■□□□□ 0.1
APOBEC3B-202ENST00000335760 TAF2Q6P1X5 1199 aa15.66■□□□□ 0.1
APOBEC3B-202ENST00000335760 MAEAQ7L5Y9 396 aa15.66■□□□□ 0.1
APOBEC3B-202ENST00000335760 C7orf61Q8IZ16 206 aa15.66■□□□□ 0.1
APOBEC3B-202ENST00000335760 DNAJB3Q8WWF6 145 aa15.66■□□□□ 0.1
APOBEC3B-202ENST00000335760 DHX38Q92620 1227 aaKnown RBP15.66■□□□□ 0.1
APOBEC3B-202ENST00000335760 DPF3Q92784 378 aa15.66■□□□□ 0.1
APOBEC3B-202ENST00000335760 WNT8BQ93098 351 aa15.66■□□□□ 0.1
APOBEC3B-202ENST00000335760 MTRQ99707 1265 aa15.66■□□□□ 0.1
APOBEC3B-202ENST00000335760 ATP6V0A4Q9HBG4 840 aa15.66■□□□□ 0.1
APOBEC3B-202ENST00000335760 TMEM39AQ9NV64 488 aa15.66■□□□□ 0.1
APOBEC3B-202ENST00000335760 EVPLQ92817 2033 aa15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 EVI5O60447 810 aa15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 CYP11B2P19099 503 aa15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 TMOD1P28289 359 aa15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 DNM2P50570 870 aa15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 MKRN4PQ13434 485 aaPredicted RBP15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 DRP2Q13474 957 aa15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 C1orf186Q6ZWK4 172 aa15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 SV2BQ7L1I2 683 aa15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 GPBP1Q86WP2 473 aa15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 CEP57L1Q8IYX8 460 aa15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 LINC01465Q8N7H1 131 aa15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 TMEM143Q96AN5 459 aa15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 RUSC1Q9BVN2 902 aa15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 CUEDC2Q9H467 287 aa15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 XPNPEP1Q9NQW7 623 aa15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 PRDM5Q9NQX1 630 aaPredicted RBP15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 PDLIM7Q9NR12 457 aa15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 SERTAD1Q9UHV2 236 aa15.65■□□□□ 0.1
APOBEC3B-202ENST00000335760 GOLGA6L22H0YM25 854 aa15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 GAS2O43903 313 aaKnown RBP15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 THPOP40225 353 aa15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 TRIM71Q2Q1W2 868 aaKnown RBP15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 LONRF3Q496Y0 759 aa15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 FAM102BQ5T8I3 360 aa15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 SH3RF1Q7Z6J0 888 aa15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 RSPH3Q86UC2 560 aa15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 KIAA0319LQ8IZA0 1049 aa15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 CCDC155Q8N6L0 562 aa15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 MCPH1Q8NEM0 835 aa15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 TCP11Q8WWU5 503 aa15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 MAP7D2Q96T17 732 aa15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 LMBRD1Q9NUN5 540 aa15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 SUCLA2Q9P2R7 463 aaPredicted RBP15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 USP25Q9UHP3 1055 aa15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 TBX21Q9UL17 535 aa15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 AKT3Q9Y243 479 aa15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 MKI67P46013 3256 aaKnown RBP15.64■□□□□ 0.09
APOBEC3B-202ENST00000335760 NPHP3-ACAD11A0A0J9YXS1 232 aa15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 ACTN4O43707 911 aaKnown RBP15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 ZNF202O95125 648 aa15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 KRT18P05783 430 aaKnown RBP15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 SLFN14P0C7P3 912 aa15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 LIG1P18858 919 aa15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 FAM160A1Q05DH4 1040 aa15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 RAD51AP2Q09MP3 1159 aa15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 TMEM62Q0P6H9 643 aa15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 BFSP2Q13515 415 aa15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 ARSHQ5FYA8 562 aa15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 IER5Q5VY09 327 aa15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 FMR1NBQ8N0W7 255 aaPredicted RBP15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 NME8Q8N427 588 aa15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 CAGE1Q8TC20 777 aa15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 STAMQ92783 540 aa15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 NOC4LQ9BVI4 516 aaKnown RBP15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 HIPK3Q9H422 1215 aa15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 MAGEF1Q9HAY2 307 aa15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 POLD4Q9HCU8 107 aa15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 GPRC5CQ9NQ84 441 aa15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 KCND2Q9NZV8 630 aa15.63■□□□□ 0.09
APOBEC3B-202ENST00000335760 TRIM43BA6NCK2 446 aa15.62■□□□□ 0.09
APOBEC3B-202ENST00000335760 MYMKA6NI61 221 aa15.62■□□□□ 0.09
APOBEC3B-202ENST00000335760 VTNP04004 478 aa15.62■□□□□ 0.09
APOBEC3B-202ENST00000335760 RPLP2P05387 115 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms