RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 ZSCAN5CA6NGD5 496 aaPredicted RBP15.15■□□□□ 0.02
SF1-202ENST00000334944 SLC9A1P19634 815 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 MCM3P25205 808 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 CASP4P49662 377 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 C11orf91Q3C1V1 193 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 FIGNQ5HY92 759 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 MAEAQ7L5Y9 396 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 SLFN12Q8IYM2 578 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 MYCBPAPQ8TBZ2 947 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 CRYGNQ8WXF5 182 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 SH2D3AQ9BRG2 576 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 BAIAP2L1Q9UHR4 511 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 PACSIN2Q9UNF0 486 aaPredicted RBP15.15■□□□□ 0.02
SF1-202ENST00000334944 HSF2BPO75031 334 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 GUCY2FP51841 1108 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 PLS1Q14651 629 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 PAPD7Q5XG87 772 aaKnown RBP15.15■□□□□ 0.02
SF1-202ENST00000334944 NLRP14Q86W24 1093 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 PACSIN1Q9BY11 444 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 SH2D4AQ9H788 454 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 ADAMTS1Q9UHI8 967 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 GCNT3O95395 438 aa15.14■□□□□ 0.01
SF1-202ENST00000334944 STAT2P52630 851 aa15.14■□□□□ 0.01
SF1-202ENST00000334944 KCNH2Q12809 1159 aa15.14■□□□□ 0.01
SF1-202ENST00000334944 ZC2HC1CQ53FD0 456 aaPredicted RBP15.14■□□□□ 0.01
SF1-202ENST00000334944 HYIQ5T013 277 aa15.14■□□□□ 0.01
SF1-202ENST00000334944 HGSNATQ68CP4 663 aa15.14■□□□□ 0.01
SF1-202ENST00000334944 HAUS3Q68CZ6 603 aa15.14■□□□□ 0.01
SF1-202ENST00000334944 CCDC121Q6ZUS5 278 aa15.14■□□□□ 0.01
SF1-202ENST00000334944 MS4A14Q96JA4 679 aa15.14■□□□□ 0.01
SF1-202ENST00000334944 WDR18Q9BV38 432 aa15.14■□□□□ 0.01
SF1-202ENST00000334944 GOLPH3Q9H4A6 298 aa15.14■□□□□ 0.01
SF1-202ENST00000334944 OPA1O60313 960 aa15.14■□□□□ 0.01
SF1-202ENST00000334944 USO1O60763 962 aaKnown RBP15.14■□□□□ 0.01
SF1-202ENST00000334944 SREBF1P36956 1147 aa15.14■□□□□ 0.01
SF1-202ENST00000334944 TBC1D10BQ4KMP7 808 aaPredicted RBP15.14■□□□□ 0.01
SF1-202ENST00000334944 CCDC43Q96MW1 224 aaKnown RBP15.14■□□□□ 0.01
SF1-202ENST00000334944 EIF2AK1Q9BQI3 630 aaKnown RBP15.14■□□□□ 0.01
SF1-202ENST00000334944 EPN3Q9H201 632 aa15.14■□□□□ 0.01
SF1-202ENST00000334944 PCDHB13Q9Y5F0 798 aa15.14■□□□□ 0.01
SF1-202ENST00000334944 CYP3A7-CYP3A51PA0A087WV96 503 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 FAM153BP0C7A2 387 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 CYP3A7P24462 503 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 NMT1P30419 496 aaKnown RBP15.13■□□□□ 0.01
SF1-202ENST00000334944 MYO1EQ12965 1108 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 AP3B2Q13367 1082 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 PTGISQ16647 500 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 FAM153CQ494X1 144 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 GJB7Q6PEY0 223 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 MICALCLQ6ZW33 695 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 TRIM59Q8IWR1 403 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 GMCL1P1Q8NEA9 526 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 C7orf43Q8WVR3 580 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 STAMBPL1Q96FJ0 436 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 GMCL1Q96IK5 515 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 FAM153AQ9UHL3 310 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 QSER1Q2KHR3 1735 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 FTCDO95954 541 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 RPA1P27694 616 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 IRX1P78414 480 aaPredicted RBP15.13■□□□□ 0.01
SF1-202ENST00000334944 SFMBT2Q5VUG0 894 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 STYK1Q6J9G0 422 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 EHBP1Q8NDI1 1231 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 IFT81Q8WYA0 676 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 OSBPL7Q9BZF2 842 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 VAV3Q9UKW4 847 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 GREB1LQ9C091 1923 aaPredicted RBP15.13■□□□□ 0.01
SF1-202ENST00000334944 TACC1O75410 805 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 AKAP3O75969 853 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 CALRP27797 417 aaKnown RBP15.13■□□□□ 0.01
SF1-202ENST00000334944 HNRNPH3P31942 346 aaKnown RBP15.13■□□□□ 0.01
SF1-202ENST00000334944 COG2Q14746 738 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 LARGE2Q8N3Y3 721 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 ERMNQ8TAM6 284 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 CNKSR1Q969H4 720 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 DYDC2Q96IM9 177 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 HDAC9Q9UKV0 1011 aa15.13■□□□□ 0.01
SF1-202ENST00000334944 PCNTO95613 3336 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 A0A087X0T9 212 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 TARSL2A2RTX5 802 aaKnown RBP15.12■□□□□ 0.01
SF1-202ENST00000334944 CETN3O15182 167 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 PPP1R37O75864 691 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 FAM228BP0C875 321 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 QPCTQ16769 361 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 PURBQ96QR8 312 aaKnown RBP15.12■□□□□ 0.01
SF1-202ENST00000334944 TMOD2Q9NZR1 351 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 RABGAP1Q9Y3P9 1069 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 L3MBTL1Q9Y468 752 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 SPDYE2BA6NHP3 402 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 SPDYE6P0CI01 402 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 SKOR1P84550 965 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 GRIK3Q13003 919 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 DLGAP5Q15398 846 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 AP1ARQ63HQ0 302 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 TLDC1Q6P9B6 456 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 ARMC2Q8NEN0 867 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 FLAD1Q8NFF5 587 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 MBOAT7Q96N66 472 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 GLT8D2Q9H1C3 349 aa15.12■□□□□ 0.01
SF1-202ENST00000334944 HOMER2Q9NSB8 354 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms