RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 HEXIM1O94992 359 aaKnown RBP19.34■□□□□ 0.69
LRCH3-201ENST00000334859 SETQ01105 290 aaPredicted RBP19.34■□□□□ 0.69
LRCH3-201ENST00000334859 RPS6KA1Q15418 735 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 IFI16Q16666 785 aaKnown RBP19.34■□□□□ 0.69
LRCH3-201ENST00000334859 STXBP4Q6ZWJ1 553 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 LDHDQ86WU2 507 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 BANK1Q8NDB2 785 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 KRT12Q99456 494 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 TEKT3Q9BXF9 490 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 FBXL5Q9UKA1 691 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 ESYT3A0FGR9 886 aa19.33■□□□□ 0.68
LRCH3-201ENST00000334859 GTPBP10A4D1E9 387 aaKnown RBP19.33■□□□□ 0.68
LRCH3-201ENST00000334859 IPO5O00410 1097 aaKnown RBP19.33■□□□□ 0.68
LRCH3-201ENST00000334859 IFT20Q8IY31 132 aa19.33■□□□□ 0.68
LRCH3-201ENST00000334859 LARGE2Q8N3Y3 721 aa19.33■□□□□ 0.68
LRCH3-201ENST00000334859 BORCS6Q96GS4 357 aa19.33■□□□□ 0.68
LRCH3-201ENST00000334859 GLIS2Q9BZE0 524 aaPredicted RBP19.33■□□□□ 0.68
LRCH3-201ENST00000334859 SEL1LQ9UBV2 794 aa19.33■□□□□ 0.68
LRCH3-201ENST00000334859 ARHGEF35A5YM69 484 aa19.32■□□□□ 0.68
LRCH3-201ENST00000334859 ZSCAN5CA6NGD5 496 aaPredicted RBP19.32■□□□□ 0.68
LRCH3-201ENST00000334859 GLI1P08151 1106 aa19.32■□□□□ 0.68
LRCH3-201ENST00000334859 GUCY2DQ02846 1103 aa19.32■□□□□ 0.68
LRCH3-201ENST00000334859 SPDYE2Q495Y8 402 aa19.32■□□□□ 0.68
LRCH3-201ENST00000334859 FAM160B2Q86V87 743 aa19.32■□□□□ 0.68
LRCH3-201ENST00000334859 CWC15Q9P013 229 aaKnown RBP19.32■□□□□ 0.68
LRCH3-201ENST00000334859 FRMD4BQ9Y2L6 1034 aa19.32■□□□□ 0.68
LRCH3-201ENST00000334859 PSME4Q14997 1843 aa19.32■□□□□ 0.68
LRCH3-201ENST00000334859 TNFRSF8P28908 595 aa19.32■□□□□ 0.68
LRCH3-201ENST00000334859 ZNF720Q7Z2F6 126 aa19.32■□□□□ 0.68
LRCH3-201ENST00000334859 IFT81Q8WYA0 676 aa19.32■□□□□ 0.68
LRCH3-201ENST00000334859 ZNF277Q9NRM2 450 aaPredicted RBP19.32■□□□□ 0.68
LRCH3-201ENST00000334859 AGPAT3Q9NRZ7 376 aa19.32■□□□□ 0.68
LRCH3-201ENST00000334859 ODF2LQ9ULJ1 636 aa19.32■□□□□ 0.68
LRCH3-201ENST00000334859 UBE4BO95155 1302 aa19.32■□□□□ 0.68
LRCH3-201ENST00000334859 GOLGA6CA6NDK9 693 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 GOLGA6DP0CG33 693 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 TRIM49P0CI25 452 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 TRIM49CP0CI26 452 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 FERP16591 822 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 ANXA13P27216 316 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 STAT1P42224 750 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 FMO5P49326 533 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 ZNF131P52739 623 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 PLS1Q14651 629 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.31■□□□□ 0.68
LRCH3-201ENST00000334859 SYCP3Q8IZU3 236 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 U2AF1L4Q8WU68 220 aaKnown RBP19.31■□□□□ 0.68
LRCH3-201ENST00000334859 FIZ1Q96SL8 496 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 RUFY1Q96T51 708 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 MKNK1Q9BUB5 465 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 EPB41L5Q9HCM4 733 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 GOLGA6AQ9NYA3 693 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 MYH11P35749 1972 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 KIF4AO95239 1232 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 H2AFZP0C0S5 128 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 TNNC1P63316 161 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 H2AFVQ71UI9 128 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 USP38Q8NB14 1042 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 FAM76AQ8TAV0 307 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 KCND2Q9NZV8 630 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 FEM1BQ9UK73 627 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 CCPG1Q9ULG6 757 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 NFU1Q9UMS0 254 aa19.31■□□□□ 0.68
LRCH3-201ENST00000334859 EVI5O60447 810 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 HIP1RO75146 1068 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 MUTP22033 750 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 CARSP49589 748 aaKnown RBP19.3■□□□□ 0.68
LRCH3-201ENST00000334859 PAK2Q13177 524 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 NFIL3Q16649 462 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 KLHL7Q8IXQ5 586 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 LRRC57Q8N9N7 239 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 TSEN2Q8NCE0 465 aaKnown RBP19.3■□□□□ 0.68
LRCH3-201ENST00000334859 CAVIN3Q969G5 261 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 AGBL1Q96MI9 1066 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 TMCO5BA8MYB1 307 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 F8VZ95 297 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 DDX3XO00571 662 aaKnown RBP eCLIP19.3■□□□□ 0.682e-7■■■■■ 33.6
LRCH3-201ENST00000334859 HSF2BPO75031 334 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 CBWD6Q4V339 395 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 CBWD3Q5JTY5 395 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 CBWD5Q5RIA9 395 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 MAEAQ7L5Y9 396 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 TPCN2Q8NHX9 752 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 GMLQ99445 158 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 GDF3Q9NR23 364 aa19.3■□□□□ 0.68
LRCH3-201ENST00000334859 CEP104O60308 925 aa19.29■□□□□ 0.68
LRCH3-201ENST00000334859 EXOC3O60645 756 aa19.29■□□□□ 0.68
LRCH3-201ENST00000334859 SOX5P35711 763 aa19.29■□□□□ 0.68
LRCH3-201ENST00000334859 CAP2P40123 477 aa19.29■□□□□ 0.68
LRCH3-201ENST00000334859 MYL7Q01449 175 aa19.29■□□□□ 0.68
LRCH3-201ENST00000334859 TRERF1Q96PN7 1200 aa19.29■□□□□ 0.68
LRCH3-201ENST00000334859 K7ENM7 598 aa19.28■□□□□ 0.68
LRCH3-201ENST00000334859 IVLP07476 585 aa19.28■□□□□ 0.68
LRCH3-201ENST00000334859 GUCY2CP25092 1073 aa19.28■□□□□ 0.68
LRCH3-201ENST00000334859 GRIPAP1Q4V328 841 aa19.28■□□□□ 0.68
LRCH3-201ENST00000334859 MIER3Q7Z3K6 550 aa19.28■□□□□ 0.68
LRCH3-201ENST00000334859 PEX26Q7Z412 305 aa19.28■□□□□ 0.68
LRCH3-201ENST00000334859 RDH13Q8NBN7 331 aa19.28■□□□□ 0.68
LRCH3-201ENST00000334859 MXRA8Q9BRK3 442 aa19.28■□□□□ 0.68
LRCH3-201ENST00000334859 INTS2Q9H0H0 1204 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms