RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 HIP1RO75146 1068 aa20.69■□□□□ 0.9
RFTN1-201ENST00000334133 PRLRP16471 622 aa20.69■□□□□ 0.9
RFTN1-201ENST00000334133 SKIDA1Q1XH10 827 aa20.69■□□□□ 0.9
RFTN1-201ENST00000334133 ZNF720Q7Z2F6 126 aa20.69■□□□□ 0.9
RFTN1-201ENST00000334133 IFT81Q8WYA0 676 aa20.69■□□□□ 0.9
RFTN1-201ENST00000334133 CFAP221Q4G0U5 840 aa20.68■□□□□ 0.9
RFTN1-201ENST00000334133 U2AF1L4Q8WU68 220 aaKnown RBP20.68■□□□□ 0.9
RFTN1-201ENST00000334133 NACC1Q96RE7 527 aa20.68■□□□□ 0.9
RFTN1-201ENST00000334133 TEKT3Q9BXF9 490 aa20.68■□□□□ 0.9
RFTN1-201ENST00000334133 KCNH7Q9NS40 1196 aa20.68■□□□□ 0.9
RFTN1-201ENST00000334133 KCNK3O14649 394 aa20.68■□□□□ 0.9
RFTN1-201ENST00000334133 GLI1P08151 1106 aa20.68■□□□□ 0.9
RFTN1-201ENST00000334133 GAP43P17677 238 aa20.68■□□□□ 0.9
RFTN1-201ENST00000334133 MCM3P25205 808 aa20.68■□□□□ 0.9
RFTN1-201ENST00000334133 PSMC2P35998 433 aaKnown RBP20.68■□□□□ 0.9
RFTN1-201ENST00000334133 ARHGAP44Q17R89 818 aa20.68■□□□□ 0.9
RFTN1-201ENST00000334133 KLHL7Q8IXQ5 586 aa20.68■□□□□ 0.9
RFTN1-201ENST00000334133 KRT12Q99456 494 aa20.68■□□□□ 0.9
RFTN1-201ENST00000334133 PLCB1Q9NQ66 1216 aa20.68■□□□□ 0.9
RFTN1-201ENST00000334133 CAPN2P17655 700 aa20.67■□□□□ 0.9
RFTN1-201ENST00000334133 EIF2AK2P19525 551 aaKnown RBP20.67■□□□□ 0.9
RFTN1-201ENST00000334133 CXCL9Q07325 125 aa20.67■□□□□ 0.9
RFTN1-201ENST00000334133 ZSWIM2Q8NEG5 633 aa20.67■□□□□ 0.9
RFTN1-201ENST00000334133 METTL14Q9HCE5 456 aaKnown RBP20.67■□□□□ 0.9
RFTN1-201ENST00000334133 FZD1Q9UP38 647 aa20.67■□□□□ 0.9
RFTN1-201ENST00000334133 ZC3H4Q9UPT8 1303 aaKnown RBP20.67■□□□□ 0.9
RFTN1-201ENST00000334133 DAW1Q8N136 415 aa20.67■□□□□ 0.9
RFTN1-201ENST00000334133 BORCS6Q96GS4 357 aa20.67■□□□□ 0.9
RFTN1-201ENST00000334133 AGPAT3Q9NRZ7 376 aa20.67■□□□□ 0.9
RFTN1-201ENST00000334133 ZNF536O15090 1300 aa20.67■□□□□ 0.9
RFTN1-201ENST00000334133 RASA3Q14644 834 aa20.67■□□□□ 0.9
RFTN1-201ENST00000334133 MUM1L1Q5H9M0 696 aa20.67■□□□□ 0.9
RFTN1-201ENST00000334133 MEI1Q5TIA1 1274 aa20.67■□□□□ 0.9
RFTN1-201ENST00000334133 FAM71BQ8TC56 605 aa20.67■□□□□ 0.9
RFTN1-201ENST00000334133 EXOC4Q96A65 974 aa20.67■□□□□ 0.9
RFTN1-201ENST00000334133 MXRA8Q9BRK3 442 aa20.67■□□□□ 0.9
RFTN1-201ENST00000334133 SEPT11Q9NVA2 429 aaKnown RBP20.67■□□□□ 0.9
RFTN1-201ENST00000334133 STIM2Q9P246 746 aa20.67■□□□□ 0.9
RFTN1-201ENST00000334133 ASTN2O75129 1339 aaPredicted RBP20.67■□□□□ 0.9
RFTN1-201ENST00000334133 AGPSO00116 658 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 EXOC3O60645 756 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 KCNA3P22001 575 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 HS2ST1Q7LGA3 356 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 MIER3Q7Z3K6 550 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 GLYCTKQ8IVS8 523 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 TXLNBQ8N3L3 684 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 AENQ8WTP8 325 aaKnown RBP20.66■□□□□ 0.9
RFTN1-201ENST00000334133 ACBD3Q9H3P7 528 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 PCDHGC5Q9Y5F6 944 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 DDX3XO00571 662 aaKnown RBP eCLIP20.66■□□□□ 0.9
RFTN1-201ENST00000334133 MYCLP12524 364 aaPredicted RBP20.66■□□□□ 0.9
RFTN1-201ENST00000334133 ABCB4P21439 1286 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 CARSP49589 748 aaKnown RBP20.66■□□□□ 0.9
RFTN1-201ENST00000334133 DLG4P78352 724 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 GUCY2DQ02846 1103 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 PADI6Q6TGC4 694 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 ARHGAP27Q6ZUM4 889 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 DEFB132Q7Z7B7 95 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 NIM1KQ8IY84 436 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 RTKN2Q8IZC4 609 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 FEM1BQ9UK73 627 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 STK24Q9Y6E0 443 aa20.66■□□□□ 0.9
RFTN1-201ENST00000334133 FRMPD4Q14CM0 1322 aa20.65■□□□□ 0.9
RFTN1-201ENST00000334133 K7ENM7 598 aa20.65■□□□□ 0.9
RFTN1-201ENST00000334133 EVI5O60447 810 aa20.65■□□□□ 0.9
RFTN1-201ENST00000334133 FMO5P49326 533 aa20.65■□□□□ 0.9
RFTN1-201ENST00000334133 TSEN2Q8NCE0 465 aaKnown RBP20.65■□□□□ 0.9
RFTN1-201ENST00000334133 EPB41L5Q9HCM4 733 aa20.65■□□□□ 0.9
RFTN1-201ENST00000334133 GPRC5CQ9NQ84 441 aa20.65■□□□□ 0.9
RFTN1-201ENST00000334133 CCDC66A2RUB6 948 aa20.65■□□□□ 0.9
RFTN1-201ENST00000334133 SLC16A3O15427 465 aaKnown RBP20.65■□□□□ 0.9
RFTN1-201ENST00000334133 ITGB3BPQ13352 177 aaPredicted RBP20.65■□□□□ 0.9
RFTN1-201ENST00000334133 AP1M1Q9BXS5 423 aa20.65■□□□□ 0.9
RFTN1-201ENST00000334133 PPP1R1BQ9UD71 204 aaPredicted RBP20.65■□□□□ 0.9
RFTN1-201ENST00000334133 DNAJC12Q9UKB3 198 aa20.65■□□□□ 0.9
RFTN1-201ENST00000334133 NFU1Q9UMS0 254 aa20.65■□□□□ 0.9
RFTN1-201ENST00000334133 MAPK7Q13164 816 aa20.64■□□□□ 0.9
RFTN1-201ENST00000334133 DRAP1Q14919 205 aaPredicted RBP20.64■□□□□ 0.9
RFTN1-201ENST00000334133 FAM160B2Q86V87 743 aa20.64■□□□□ 0.9
RFTN1-201ENST00000334133 CAMKK2Q96RR4 588 aa20.64■□□□□ 0.9
RFTN1-201ENST00000334133 ZNRF3Q9ULT6 936 aa20.64■□□□□ 0.9
RFTN1-201ENST00000334133 FRMD4BQ9Y2L6 1034 aa20.64■□□□□ 0.9
RFTN1-201ENST00000334133 CEP104O60308 925 aa20.64■□□□□ 0.89
RFTN1-201ENST00000334133 SORBS3O60504 671 aa20.64■□□□□ 0.89
RFTN1-201ENST00000334133 HEXIM1O94992 359 aaKnown RBP20.64■□□□□ 0.89
RFTN1-201ENST00000334133 ASNSP08243 561 aa20.64■□□□□ 0.89
RFTN1-201ENST00000334133 FAM153BP0C7A2 387 aa20.64■□□□□ 0.89
RFTN1-201ENST00000334133 GUCY2FP51841 1108 aa20.64■□□□□ 0.89
RFTN1-201ENST00000334133 JAM2P57087 298 aa20.64■□□□□ 0.89
RFTN1-201ENST00000334133 FAM153CQ494X1 144 aa20.64■□□□□ 0.89
RFTN1-201ENST00000334133 ELMO3Q96BJ8 720 aa20.64■□□□□ 0.89
RFTN1-201ENST00000334133 EHMT1Q9H9B1 1298 aa20.64■□□□□ 0.89
RFTN1-201ENST00000334133 FAM153AQ9UHL3 310 aa20.64■□□□□ 0.89
RFTN1-201ENST00000334133 GOLGA6BA6NDN3 693 aa20.64■□□□□ 0.89
RFTN1-201ENST00000334133 PPP1R12BO60237 982 aaPredicted RBP20.64■□□□□ 0.89
RFTN1-201ENST00000334133 SPP2Q13103 211 aa20.64■□□□□ 0.89
RFTN1-201ENST00000334133 RPS6KA1Q15418 735 aa20.64■□□□□ 0.89
RFTN1-201ENST00000334133 ZNF572Q7Z3I7 529 aaPredicted RBP20.64■□□□□ 0.89
RFTN1-201ENST00000334133 TAAR1Q96RJ0 339 aa20.64■□□□□ 0.89
RFTN1-201ENST00000334133 OSGEPQ9NPF4 335 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms