RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 PSMC2P35998 433 aaKnown RBP16.26■□□□□ 0.19
CLCNKA-201ENST00000331433 ITGB3BPQ13352 177 aaPredicted RBP16.26■□□□□ 0.19
CLCNKA-201ENST00000331433 MUM1L1Q5H9M0 696 aa16.26■□□□□ 0.19
CLCNKA-201ENST00000331433 MIER3Q7Z3K6 550 aa16.26■□□□□ 0.19
CLCNKA-201ENST00000331433 DAW1Q8N136 415 aa16.26■□□□□ 0.19
CLCNKA-201ENST00000331433 GDAP1L1Q96MZ0 367 aa16.26■□□□□ 0.19
CLCNKA-201ENST00000331433 PIM2Q9P1W9 311 aa16.26■□□□□ 0.19
CLCNKA-201ENST00000331433 WDR46O15213 610 aaKnown RBP16.26■□□□□ 0.19
CLCNKA-201ENST00000331433 MAPK7Q13164 816 aa16.26■□□□□ 0.19
CLCNKA-201ENST00000331433 CCDC181Q5TID7 509 aa16.26■□□□□ 0.19
CLCNKA-201ENST00000331433 HDAC7Q8WUI4 952 aa16.26■□□□□ 0.19
CLCNKA-201ENST00000331433 JDP2Q8WYK2 163 aa16.26■□□□□ 0.19
CLCNKA-201ENST00000331433 AGPAT3Q9NRZ7 376 aa16.26■□□□□ 0.19
CLCNKA-201ENST00000331433 SEL1LQ9UBV2 794 aa16.26■□□□□ 0.19
CLCNKA-201ENST00000331433 ODF2LQ9ULJ1 636 aa16.26■□□□□ 0.19
CLCNKA-201ENST00000331433 DHX15O43143 795 aaKnown RBP16.25■□□□□ 0.19
CLCNKA-201ENST00000331433 MRPS9P82933 396 aaKnown RBP16.25■□□□□ 0.19
CLCNKA-201ENST00000331433 HS2ST1Q7LGA3 356 aa16.25■□□□□ 0.19
CLCNKA-201ENST00000331433 MS4A14Q96JA4 679 aa16.25■□□□□ 0.19
CLCNKA-201ENST00000331433 SH2D3AQ9BRG2 576 aa16.25■□□□□ 0.19
CLCNKA-201ENST00000331433 TAOK3Q9H2K8 898 aa16.25■□□□□ 0.19
CLCNKA-201ENST00000331433 KCND2Q9NZV8 630 aa16.25■□□□□ 0.19
CLCNKA-201ENST00000331433 PACSIN2Q9UNF0 486 aaPredicted RBP16.25■□□□□ 0.19
CLCNKA-201ENST00000331433 SAMM50Q9Y512 469 aa16.25■□□□□ 0.19
CLCNKA-201ENST00000331433 FLOT1O75955 427 aa16.25■□□□□ 0.19
CLCNKA-201ENST00000331433 EIF2AK2P19525 551 aaKnown RBP16.25■□□□□ 0.19
CLCNKA-201ENST00000331433 GUCY2CP25092 1073 aa16.25■□□□□ 0.19
CLCNKA-201ENST00000331433 TKFCQ3LXA3 575 aa16.25■□□□□ 0.19
CLCNKA-201ENST00000331433 PADI6Q6TGC4 694 aa16.25■□□□□ 0.19
CLCNKA-201ENST00000331433 TRMT1LQ7Z2T5 733 aaKnown RBP16.25■□□□□ 0.19
CLCNKA-201ENST00000331433 ZNF572Q7Z3I7 529 aaPredicted RBP16.25■□□□□ 0.19
CLCNKA-201ENST00000331433 LRRC1Q9BTT6 524 aa16.25■□□□□ 0.19
CLCNKA-201ENST00000331433 PPP1R12BO60237 982 aaPredicted RBP16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 TRIM49P0CI25 452 aa16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 TRIM49CP0CI26 452 aa16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 BCRP11274 1271 aa16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 TNNT3P45378 269 aaPredicted RBP16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 JAM2P57087 298 aa16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 MTMR2Q13614 643 aa16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 MMGT1Q8N4V1 131 aa16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 SYTL5Q8TDW5 730 aaPredicted RBP16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 LPAR1Q92633 364 aa16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 KIAA1683Q9H0B3 1180 aa16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 SLC38A10Q9HBR0 1119 aa16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 DMGDHQ9UI17 866 aaKnown RBP16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 ZHX2Q9Y6X8 837 aa16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 EIF3JO75822 258 aaKnown RBP16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 MCM3P25205 808 aa16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 NFIL3Q16649 462 aa16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 SAMD7Q7Z3H4 446 aa16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 MCF2L2Q86YR7 1114 aa16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 TAAR1Q96RJ0 339 aa16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 AGO4Q9HCK5 861 aaKnown RBP16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 NAGPAQ9UK23 515 aa16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 PCDHGC5Q9Y5F6 944 aa16.24■□□□□ 0.19
CLCNKA-201ENST00000331433 GTPBP10A4D1E9 387 aaKnown RBP16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 TMEM150BA6NC51 233 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 K7ENM7 598 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 ZBTB7AO95365 584 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 P4HBP07237 508 aaKnown RBP16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 VCAM1P19320 739 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 BAG6P46379 1132 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 FMO5P49326 533 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 RPS6P62753 249 aaKnown RBP16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 SLC7A5Q01650 507 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 SPP2Q13103 211 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 GPS2Q13227 327 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 MTMR1Q13613 665 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 CBWD6Q4V339 395 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 CBWD3Q5JTY5 395 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 CBWD5Q5RIA9 395 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 STXBP4Q6ZWJ1 553 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 SYCP3Q8IZU3 236 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 RDH13Q8NBN7 331 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 DMAC2Q9NW81 257 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 FBXL5Q9UKA1 691 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 FRMD4BQ9Y2L6 1034 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 UBIAD1Q9Y5Z9 338 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 BZW2Q9Y6E2 419 aaKnown RBP16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 UBE4BO95155 1302 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 GRID2IPA4D2P6 1211 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 ERICH4A6NGS2 130 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 TISP43B9A030 160 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 GFPT2O94808 682 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 PRKCIP41743 596 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 PAFAH1B1P43034 410 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 ITIH3Q06033 890 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 SF3B2Q13435 895 aaKnown RBP16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 MAP9Q49MG5 647 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 DALRD3Q5D0E6 543 aaKnown RBP16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 PCNX4Q63HM2 1172 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 ALKBH5Q6P6C2 394 aaKnown RBP16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 CCNI2Q6ZMN8 369 aaPredicted RBP16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 CCDC102AQ96A19 550 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 MKNK1Q9BUB5 465 aa16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 RBM12Q9NTZ6 932 aaKnown RBP16.23■□□□□ 0.19
CLCNKA-201ENST00000331433 NFKBIEO00221 500 aa16.22■□□□□ 0.19
CLCNKA-201ENST00000331433 PPP1R37O75864 691 aa16.22■□□□□ 0.19
CLCNKA-201ENST00000331433 MYCLP12524 364 aaPredicted RBP16.22■□□□□ 0.19
CLCNKA-201ENST00000331433 TNFAIP1Q13829 316 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms