RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 MAPTP10636 758 aaKnown RBP18.64■□□□□ 0.57
DDX41-201ENST00000330503 PLS3P13797 630 aa18.64■□□□□ 0.57
DDX41-201ENST00000330503 ACTR2P61160 394 aa18.64■□□□□ 0.57
DDX41-201ENST00000330503 SWSAP1Q6NVH7 229 aa18.64■□□□□ 0.57
DDX41-201ENST00000330503 WDR24Q96S15 920 aa18.64■□□□□ 0.57
DDX41-201ENST00000330503 EDEM3Q9BZQ6 932 aa18.64■□□□□ 0.57
DDX41-201ENST00000330503 POTEB2H3BUK9 544 aa18.64■□□□□ 0.57
DDX41-201ENST00000330503 SORBS3O60504 671 aa18.64■□□□□ 0.57
DDX41-201ENST00000330503 ABL1P00519 1130 aa18.64■□□□□ 0.57
DDX41-201ENST00000330503 EDNRBP24530 442 aa18.64■□□□□ 0.57
DDX41-201ENST00000330503 CDK17Q00537 523 aa18.64■□□□□ 0.57
DDX41-201ENST00000330503 STXBP4Q6ZWJ1 553 aa18.64■□□□□ 0.57
DDX41-201ENST00000330503 FASTKD5Q7L8L6 764 aaKnown RBP18.64■□□□□ 0.57
DDX41-201ENST00000330503 PNMA8AQ86V59 439 aaPredicted RBP18.64■□□□□ 0.57
DDX41-201ENST00000330503 FAM133AQ8N9E0 248 aa18.64■□□□□ 0.57
DDX41-201ENST00000330503 CRACR2AQ9BSW2 395 aa18.64■□□□□ 0.57
DDX41-201ENST00000330503 IRX2Q9BZI1 471 aaPredicted RBP18.64■□□□□ 0.57
DDX41-201ENST00000330503 LZTFL1Q9NQ48 299 aa18.64■□□□□ 0.57
DDX41-201ENST00000330503 GPRC5CQ9NQ84 441 aa18.64■□□□□ 0.57
DDX41-201ENST00000330503 PLAGL2Q9UPG8 496 aa18.64■□□□□ 0.57
DDX41-201ENST00000330503 CTIFO43310 598 aaKnown RBP18.63■□□□□ 0.57
DDX41-201ENST00000330503 PSAPP07602 524 aa18.63■□□□□ 0.57
DDX41-201ENST00000330503 ARHGAP25P42331 645 aa18.63■□□□□ 0.57
DDX41-201ENST00000330503 DPY19L2P1Q6NXN4 242 aa18.63■□□□□ 0.57
DDX41-201ENST00000330503 NEK11Q8NG66 645 aa18.63■□□□□ 0.57
DDX41-201ENST00000330503 TIPINQ9BVW5 301 aa18.63■□□□□ 0.57
DDX41-201ENST00000330503 AGPAT3Q9NRZ7 376 aa18.63■□□□□ 0.57
DDX41-201ENST00000330503 ZNHIT6Q9NWK9 470 aaKnown RBP18.63■□□□□ 0.57
DDX41-201ENST00000330503 LARSQ9P2J5 1176 aaKnown RBP18.63■□□□□ 0.57
DDX41-201ENST00000330503 GRIN3BO60391 1043 aa18.62■□□□□ 0.57
DDX41-201ENST00000330503 GNG11P61952 73 aa18.62■□□□□ 0.57
DDX41-201ENST00000330503 APBA1Q02410 837 aa18.62■□□□□ 0.57
DDX41-201ENST00000330503 SP4Q02446 784 aa18.62■□□□□ 0.57
DDX41-201ENST00000330503 CCDC60Q8IWA6 550 aaPredicted RBP18.62■□□□□ 0.57
DDX41-201ENST00000330503 LSM14BQ9BX40 385 aaKnown RBP18.62■□□□□ 0.57
DDX41-201ENST00000330503 GBP3Q9H0R5 595 aa18.62■□□□□ 0.57
DDX41-201ENST00000330503 L2HGDHQ9H9P8 463 aa18.62■□□□□ 0.57
DDX41-201ENST00000330503 NHEJ1Q9H9Q4 299 aaPredicted RBP18.62■□□□□ 0.57
DDX41-201ENST00000330503 METTL14Q9HCE5 456 aaKnown RBP18.62■□□□□ 0.57
DDX41-201ENST00000330503 SLC25A27O95847 323 aa18.62■□□□□ 0.57
DDX41-201ENST00000330503 SEPT14Q6ZU15 432 aa18.62■□□□□ 0.57
DDX41-201ENST00000330503 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.62■□□□□ 0.57
DDX41-201ENST00000330503 RRAGAQ7L523 313 aa18.62■□□□□ 0.57
DDX41-201ENST00000330503 CYFIP1Q7L576 1253 aa18.62■□□□□ 0.57
DDX41-201ENST00000330503 SLC10A4Q96EP9 437 aa18.62■□□□□ 0.57
DDX41-201ENST00000330503 CLEC11AQ9Y240 323 aa18.62■□□□□ 0.57
DDX41-201ENST00000330503 K7ENM7 598 aa18.61■□□□□ 0.57
DDX41-201ENST00000330503 ATG7O95352 703 aa18.61■□□□□ 0.57
DDX41-201ENST00000330503 AFPP02771 609 aaKnown RBP18.61■□□□□ 0.57
DDX41-201ENST00000330503 EPB41P11171 864 aaKnown RBP18.61■□□□□ 0.57
DDX41-201ENST00000330503 OSBPP22059 807 aa18.61■□□□□ 0.57
DDX41-201ENST00000330503 PPP2R3AQ06190 1150 aa18.61■□□□□ 0.57
DDX41-201ENST00000330503 MAP1SQ66K74 1059 aaPredicted RBP18.61■□□□□ 0.57
DDX41-201ENST00000330503 PDXDC1Q6P996 788 aa18.61■□□□□ 0.57
DDX41-201ENST00000330503 OTUD6AQ7L8S5 288 aa18.61■□□□□ 0.57
DDX41-201ENST00000330503 ATP6V0A1Q93050 837 aa18.61■□□□□ 0.57
DDX41-201ENST00000330503 SLC35C1Q96A29 364 aa18.61■□□□□ 0.57
DDX41-201ENST00000330503 DRC1Q96MC2 740 aa18.61■□□□□ 0.57
DDX41-201ENST00000330503 CCDC43Q96MW1 224 aaKnown RBP18.61■□□□□ 0.57
DDX41-201ENST00000330503 PDLIM7Q9NR12 457 aa18.61■□□□□ 0.57
DDX41-201ENST00000330503 LRRC53A6NM62 1247 aa18.61■□□□□ 0.57
DDX41-201ENST00000330503 SUPT20HL2P0C7V6 817 aa18.61■□□□□ 0.57
DDX41-201ENST00000330503 PSMC2P35998 433 aaKnown RBP18.61■□□□□ 0.57
DDX41-201ENST00000330503 HS2ST1Q7LGA3 356 aa18.61■□□□□ 0.57
DDX41-201ENST00000330503 ST6GALNAC4Q9H4F1 302 aa18.61■□□□□ 0.57
DDX41-201ENST00000330503 CEP72Q9P209 647 aa18.61■□□□□ 0.57
DDX41-201ENST00000330503 SOCS7O14512 581 aa18.6■□□□□ 0.57
DDX41-201ENST00000330503 PLEKP08567 350 aaPredicted RBP18.6■□□□□ 0.57
DDX41-201ENST00000330503 XRCC5P13010 732 aaKnown RBP18.6■□□□□ 0.57
DDX41-201ENST00000330503 PEX3P56589 373 aa18.6■□□□□ 0.57
DDX41-201ENST00000330503 GTF2BQ00403 316 aa18.6■□□□□ 0.57
DDX41-201ENST00000330503 ALCAMQ13740 583 aa18.6■□□□□ 0.57
DDX41-201ENST00000330503 FAM102BQ5T8I3 360 aa18.6■□□□□ 0.57
DDX41-201ENST00000330503 MIS18BP1Q6P0N0 1132 aa18.6■□□□□ 0.57
DDX41-201ENST00000330503 HAUS6Q7Z4H7 955 aa18.6■□□□□ 0.57
DDX41-201ENST00000330503 SLC9A9Q8IVB4 645 aa18.6■□□□□ 0.57
DDX41-201ENST00000330503 FAM186BQ8IYM0 893 aa18.6■□□□□ 0.57
DDX41-201ENST00000330503 CCDC170Q8IYT3 715 aa18.6■□□□□ 0.57
DDX41-201ENST00000330503 ZNF526Q8TF50 670 aaPredicted RBP18.6■□□□□ 0.57
DDX41-201ENST00000330503 CEP170P1Q96L14 293 aa18.6■□□□□ 0.57
DDX41-201ENST00000330503 FGD4Q96M96 766 aa18.6■□□□□ 0.57
DDX41-201ENST00000330503 ARHGAP20Q9P2F6 1191 aa18.6■□□□□ 0.57
DDX41-201ENST00000330503 SYNGAP1Q96PV0 1343 aa18.6■□□□□ 0.57
DDX41-201ENST00000330503 DKC1O60832 514 aaKnown RBP eCLIP18.59■□□□□ 0.57
DDX41-201ENST00000330503 ATP4AP20648 1035 aa18.59■□□□□ 0.57
DDX41-201ENST00000330503 CYP2J2P51589 502 aa18.59■□□□□ 0.57
DDX41-201ENST00000330503 NCKAP1LP55160 1127 aa18.59■□□□□ 0.57
DDX41-201ENST00000330503 SNAPC2Q13487 334 aa18.59■□□□□ 0.57
DDX41-201ENST00000330503 ILDR2Q71H61 639 aa18.59■□□□□ 0.57
DDX41-201ENST00000330503 SYCP3Q8IZU3 236 aa18.59■□□□□ 0.57
DDX41-201ENST00000330503 GOLGA5Q8TBA6 731 aa18.59■□□□□ 0.57
DDX41-201ENST00000330503 ACCSQ96QU6 501 aa18.59■□□□□ 0.57
DDX41-201ENST00000330503 MKNK1Q9BUB5 465 aa18.59■□□□□ 0.57
DDX41-201ENST00000330503 GANQ9H2C0 597 aa18.59■□□□□ 0.57
DDX41-201ENST00000330503 NLRC4Q9NPP4 1024 aa18.59■□□□□ 0.57
DDX41-201ENST00000330503 EIF3CLB5ME19 914 aaKnown RBP18.59■□□□□ 0.57
DDX41-201ENST00000330503 SLC16A4O15374 487 aa18.59■□□□□ 0.57
DDX41-201ENST00000330503 PGK2P07205 417 aa18.59■□□□□ 0.57
DDX41-201ENST00000330503 SLC9A1P19634 815 aa18.59■□□□□ 0.57
DDX41-201ENST00000330503 CASQ1P31415 396 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms