RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 PTPROQ16827 1216 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 TTC31Q49AM3 519 aaPredicted RBP16.76■□□□□ 0.27
BRCC3-201ENST00000330045 H2AFVQ71UI9 128 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 METTL13Q8N6R0 699 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 C1orf131Q8NDD1 294 aaKnown RBP16.76■□□□□ 0.27
BRCC3-201ENST00000330045 ZDHHC15Q96MV8 337 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 BCAS3Q9H6U6 928 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 VAV3Q9UKW4 847 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 PCDHB13Q9Y5F0 798 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 ATP8B3O60423 1300 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 PGRMC1O00264 195 aaKnown RBP16.75■□□□□ 0.27
BRCC3-201ENST00000330045 EYA4O95677 639 aa16.75■□□□□ 0.27
BRCC3-201ENST00000330045 EMC10Q5UCC4 262 aa16.75■□□□□ 0.27
BRCC3-201ENST00000330045 SH3BP5LQ7L8J4 393 aa16.75■□□□□ 0.27
BRCC3-201ENST00000330045 PEX26Q7Z412 305 aa16.75■□□□□ 0.27
BRCC3-201ENST00000330045 RNPC3Q96LT9 517 aaKnown RBP16.75■□□□□ 0.27
BRCC3-201ENST00000330045 EIF2AK1Q9BQI3 630 aaKnown RBP16.75■□□□□ 0.27
BRCC3-201ENST00000330045 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.75■□□□□ 0.272e-6■■■■□ 23.3
BRCC3-201ENST00000330045 POLR3CQ9BUI4 534 aaPredicted RBP16.75■□□□□ 0.27
BRCC3-201ENST00000330045 AP1M1Q9BXS5 423 aa16.75■□□□□ 0.27
BRCC3-201ENST00000330045 TDRD3Q9H7E2 651 aaKnown RBP16.75■□□□□ 0.27
BRCC3-201ENST00000330045 FAM198AQ9UFP1 575 aa16.75■□□□□ 0.27
BRCC3-201ENST00000330045 PLAAQ9Y263 795 aa16.75■□□□□ 0.27
BRCC3-201ENST00000330045 A0A0A6YYK5 440 aaPredicted RBP16.75■□□□□ 0.27
BRCC3-201ENST00000330045 GTPBP10A4D1E9 387 aaKnown RBP16.75■□□□□ 0.27
BRCC3-201ENST00000330045 ZBTB48P10074 688 aaPredicted RBP16.75■□□□□ 0.27
BRCC3-201ENST00000330045 NR1D1P20393 614 aa16.75■□□□□ 0.27
BRCC3-201ENST00000330045 MMP14P50281 582 aa16.75■□□□□ 0.27
BRCC3-201ENST00000330045 CUL1Q13616 776 aa16.75■□□□□ 0.27
BRCC3-201ENST00000330045 GJB7Q6PEY0 223 aa16.75■□□□□ 0.27
BRCC3-201ENST00000330045 SLFN11Q7Z7L1 901 aa16.75■□□□□ 0.27
BRCC3-201ENST00000330045 TADA2BQ86TJ2 420 aa16.75■□□□□ 0.27
BRCC3-201ENST00000330045 PACS2Q86VP3 889 aa16.75■□□□□ 0.27
BRCC3-201ENST00000330045 CYP2W1Q8TAV3 490 aa16.75■□□□□ 0.27
BRCC3-201ENST00000330045 ATP6V1G3Q96LB4 118 aa16.75■□□□□ 0.27
BRCC3-201ENST00000330045 OLFML3Q9NRN5 406 aa16.75■□□□□ 0.27
BRCC3-201ENST00000330045 INTUQ9ULD6 942 aa16.75■□□□□ 0.27
BRCC3-201ENST00000330045 SFI1A8K8P3 1242 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 DDX3XO00571 662 aaKnown RBP eCLIP16.74■□□□□ 0.273e-7■■■■□ 19.9
BRCC3-201ENST00000330045 NDUFAB1O14561 156 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 SART1O43290 800 aaKnown RBP16.74■□□□□ 0.27
BRCC3-201ENST00000330045 ZNF76P36508 570 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 SYDE2Q5VT97 1194 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 TMEM179Q6ZVK1 233 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 MAATS1Q7Z4T9 603 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 RGL1Q9NZL6 768 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 NOC2LQ9Y3T9 749 aaKnown RBP16.74■□□□□ 0.27
BRCC3-201ENST00000330045 HMGB1P1B2RPK0 211 aaPredicted RBP16.74■□□□□ 0.27
BRCC3-201ENST00000330045 EML1O00423 815 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 TGFB1I1O43294 461 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 ZEB2O60315 1214 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 FERP16591 822 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 GAP43P17677 238 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 ECHS1P30084 290 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 HOXA13P31271 388 aaPredicted RBP16.74■□□□□ 0.27
BRCC3-201ENST00000330045 R3HDM1Q15032 1099 aaKnown RBP16.74■□□□□ 0.27
BRCC3-201ENST00000330045 CEP85LQ5SZL2 805 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 RINT1Q6NUQ1 792 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 TATDN1Q6P1N9 297 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 SYCE1Q8N0S2 351 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 GMCL1P1Q8NEA9 526 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 GMCL1Q96IK5 515 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 PRMT6Q96LA8 375 aaPredicted RBP16.74■□□□□ 0.27
BRCC3-201ENST00000330045 SUCLA2Q9P2R7 463 aaPredicted RBP16.74■□□□□ 0.27
BRCC3-201ENST00000330045 SAMM50Q9Y512 469 aa16.74■□□□□ 0.27
BRCC3-201ENST00000330045 CCDC188H7C350 402 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 KRIT1O00522 736 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 GFPT2O94808 682 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 NDUFB10O96000 172 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 STAT1P42224 750 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 DAAM2Q86T65 1068 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 U2AF1L4Q8WU68 220 aaKnown RBP16.73■□□□□ 0.27
BRCC3-201ENST00000330045 BORCS6Q96GS4 357 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 STXBP5LQ9Y2K9 1186 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 VGLL3A8MV65 326 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 GDF11O95390 407 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 CPP00450 1065 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 TAL1P17542 331 aaPredicted RBP16.73■□□□□ 0.27
BRCC3-201ENST00000330045 LSP1P33241 339 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 PSMC2P35998 433 aaKnown RBP16.73■□□□□ 0.27
BRCC3-201ENST00000330045 NPEPPSP55786 919 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 GUCY1A3Q02108 690 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 LRIG3Q6UXM1 1119 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 RASGEF1CQ8N431 466 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 KCTD17Q8N5Z5 321 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 PIGOQ8TEQ8 1089 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 LRRC45Q96CN5 670 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 IDI2Q9BXS1 227 aa16.73■□□□□ 0.27
BRCC3-201ENST00000330045 DDX47Q9H0S4 455 aaKnown RBP16.73■□□□□ 0.27
BRCC3-201ENST00000330045 GOLGA6L10A6NI86 522 aa16.72■□□□□ 0.27
BRCC3-201ENST00000330045 BHMG1C9JSJ3 638 aaPredicted RBP16.72■□□□□ 0.27
BRCC3-201ENST00000330045 OPLAHO14841 1288 aa16.72■□□□□ 0.27
BRCC3-201ENST00000330045 EIF3DO15371 548 aaKnown RBP eCLIP16.72■□□□□ 0.27
BRCC3-201ENST00000330045 PPP1R12BO60237 982 aaPredicted RBP16.72■□□□□ 0.27
BRCC3-201ENST00000330045 FAM13AO94988 1023 aa16.72■□□□□ 0.27
BRCC3-201ENST00000330045 CYP3A4P08684 503 aa16.72■□□□□ 0.27
BRCC3-201ENST00000330045 HSD17B3P37058 310 aa16.72■□□□□ 0.27
BRCC3-201ENST00000330045 ABCB5Q2M3G0 1257 aa16.72■□□□□ 0.27
BRCC3-201ENST00000330045 B4GALNT4Q76KP1 1039 aa16.72■□□□□ 0.27
BRCC3-201ENST00000330045 NT5DC3Q86UY8 548 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms