RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 HS2ST1Q7LGA3 356 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 DRC1Q96MC2 740 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 SH2D3AQ9BRG2 576 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 IKZF4Q9H2S9 585 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 RBPJLQ9UBG7 517 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 CLEC11AQ9Y240 323 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 TELO2Q9Y4R8 837 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 MYH9P35579 1960 aaKnown RBP16.41■□□□□ 0.22
TPM3-205ENST00000328159 STBD1O95210 358 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 EDNRBP24530 442 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 HNRNPH3P31942 346 aaKnown RBP16.41■□□□□ 0.22
TPM3-205ENST00000328159 COPB2P35606 906 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 GJA5P36382 358 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 SP4Q02446 784 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 SWSAP1Q6NVH7 229 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 MIS18BP1Q6P0N0 1132 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 ABHD15Q6UXT9 468 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 ANO5Q75V66 913 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 OTUD6AQ7L8S5 288 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 TRMT1LQ7Z2T5 733 aaKnown RBP16.41■□□□□ 0.22
TPM3-205ENST00000328159 FAM133AQ8N9E0 248 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 GOLGA5Q8TBA6 731 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 LSM14BQ9BX40 385 aaKnown RBP16.41■□□□□ 0.22
TPM3-205ENST00000328159 GBP3Q9H0R5 595 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 TXNRD2Q9NNW7 524 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 LRRC37A2A6NM11 1700 aa16.4■□□□□ 0.22
TPM3-205ENST00000328159 ZNF862O60290 1169 aa16.4■□□□□ 0.22
TPM3-205ENST00000328159 AFPP02771 609 aaKnown RBP16.4■□□□□ 0.22
TPM3-205ENST00000328159 PSMC2P35998 433 aaKnown RBP16.4■□□□□ 0.22
TPM3-205ENST00000328159 GNG11P61952 73 aa16.4■□□□□ 0.22
TPM3-205ENST00000328159 SP2Q02086 613 aa16.4■□□□□ 0.22
TPM3-205ENST00000328159 SNAPC2Q13487 334 aa16.4■□□□□ 0.22
TPM3-205ENST00000328159 SEPT14Q6ZU15 432 aa16.4■□□□□ 0.22
TPM3-205ENST00000328159 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.4■□□□□ 0.22
TPM3-205ENST00000328159 BAP1Q92560 729 aa16.4■□□□□ 0.22
TPM3-205ENST00000328159 SLC10A4Q96EP9 437 aa16.4■□□□□ 0.22
TPM3-205ENST00000328159 LZTFL1Q9NQ48 299 aa16.4■□□□□ 0.22
TPM3-205ENST00000328159 AGPAT3Q9NRZ7 376 aa16.4■□□□□ 0.22
TPM3-205ENST00000328159 A0A0U1RQJ8 604 aa16.39■□□□□ 0.21
TPM3-205ENST00000328159 SORBS3O60504 671 aa16.39■□□□□ 0.21
TPM3-205ENST00000328159 SUPT20HL2P0C7V6 817 aa16.39■□□□□ 0.21
TPM3-205ENST00000328159 XRCC5P13010 732 aaKnown RBP16.39■□□□□ 0.21
TPM3-205ENST00000328159 FAM102BQ5T8I3 360 aa16.39■□□□□ 0.21
TPM3-205ENST00000328159 CCDC60Q8IWA6 550 aaPredicted RBP16.39■□□□□ 0.21
TPM3-205ENST00000328159 CCDC170Q8IYT3 715 aa16.39■□□□□ 0.21
TPM3-205ENST00000328159 SYCP3Q8IZU3 236 aa16.39■□□□□ 0.21
TPM3-205ENST00000328159 ATRIPQ8WXE1 791 aa16.39■□□□□ 0.21
TPM3-205ENST00000328159 BORCS6Q96GS4 357 aa16.39■□□□□ 0.21
TPM3-205ENST00000328159 MKNK1Q9BUB5 465 aa16.39■□□□□ 0.21
TPM3-205ENST00000328159 R3HDMLQ9H3Y0 253 aa16.39■□□□□ 0.21
TPM3-205ENST00000328159 GPRC5CQ9NQ84 441 aa16.39■□□□□ 0.21
TPM3-205ENST00000328159 DMAC2Q9NW81 257 aa16.39■□□□□ 0.21
TPM3-205ENST00000328159 CEP72Q9P209 647 aa16.39■□□□□ 0.21
TPM3-205ENST00000328159 PLAGL2Q9UPG8 496 aa16.39■□□□□ 0.21
TPM3-205ENST00000328159 FANCGO15287 622 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 NOL4O94818 638 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 POTEJP0CG39 1038 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 CYLC1P35663 651 aaPredicted RBP16.38■□□□□ 0.21
TPM3-205ENST00000328159 PDXDC1Q6P996 788 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 RRAGAQ7L523 313 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 CYFIP1Q7L576 1253 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 CACNA2D4Q7Z3S7 1137 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 FAM186BQ8IYM0 893 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 CEP170P1Q96L14 293 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 ACCSQ96QU6 501 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 CRACR2AQ9BSW2 395 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 ST6GALNAC4Q9H4F1 302 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 TMEM206Q9H813 350 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 NHEJ1Q9H9Q4 299 aaPredicted RBP16.38■□□□□ 0.21
TPM3-205ENST00000328159 REXO2Q9Y3B8 237 aaKnown RBP16.38■□□□□ 0.21
TPM3-205ENST00000328159 UNCXA6NJT0 531 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 LRRC53A6NM62 1247 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 CTIFO43310 598 aaKnown RBP16.38■□□□□ 0.21
TPM3-205ENST00000328159 CASQ1P31415 396 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 CYP2J2P51589 502 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 NCKAP1LP55160 1127 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 PRKCEQ02156 737 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 Q3C1V9 767 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 ARHGAP29Q52LW3 1261 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 DCAF17Q5H9S7 520 aaPredicted RBP16.38■□□□□ 0.21
TPM3-205ENST00000328159 MAP1SQ66K74 1059 aaPredicted RBP16.38■□□□□ 0.21
TPM3-205ENST00000328159 HAUS6Q7Z4H7 955 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 SLC9A9Q8IVB4 645 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 SLC17A8Q8NDX2 589 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 SLC35C1Q96A29 364 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 WDR24Q96S15 920 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 ZNF408Q9H9D4 720 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 L2HGDHQ9H9P8 463 aa16.38■□□□□ 0.21
TPM3-205ENST00000328159 IGSF9BQ9UPX0 1349 aa16.37■□□□□ 0.21
TPM3-205ENST00000328159 KIF5CO60282 957 aa16.37■□□□□ 0.21
TPM3-205ENST00000328159 ATG7O95352 703 aa16.37■□□□□ 0.21
TPM3-205ENST00000328159 ARHGAP25P42331 645 aa16.37■□□□□ 0.21
TPM3-205ENST00000328159 PEX3P56589 373 aa16.37■□□□□ 0.21
TPM3-205ENST00000328159 KRT83P78385 493 aa16.37■□□□□ 0.21
TPM3-205ENST00000328159 GTF2BQ00403 316 aa16.37■□□□□ 0.21
TPM3-205ENST00000328159 MYBPC2Q14324 1141 aa16.37■□□□□ 0.21
TPM3-205ENST00000328159 TCERG1LQ5VWI1 586 aa16.37■□□□□ 0.21
TPM3-205ENST00000328159 NUCKS1Q9H1E3 243 aaKnown RBP16.37■□□□□ 0.21
TPM3-205ENST00000328159 SEPT9Q9UHD8 586 aaPredicted RBP16.37■□□□□ 0.21
TPM3-205ENST00000328159 FRMD4BQ9Y2L6 1034 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms