RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 NDUFAB1O14561 156 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 FERP16591 822 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 RPA1P27694 616 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 CA8P35219 290 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 NSFP46459 744 aaKnown RBP11.93□□□□□ -0.5
TOP3A-201ENST00000321105 SLCO1A2P46721 670 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 DYNLT1P63172 113 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 COG2Q14746 738 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 CPLX4Q7Z7G2 160 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 C7orf31Q8N865 590 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 RIN2Q8WYP3 895 aaPredicted RBP11.93□□□□□ -0.5
TOP3A-201ENST00000321105 PI4K2AQ9BTU6 479 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 HEMGNQ9BXL5 484 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 MTRF1LQ9UGC7 380 aaKnown RBP11.93□□□□□ -0.5
TOP3A-201ENST00000321105 MYO1FO00160 1098 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 THAP12O43422 761 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 YARSP54577 528 aaKnown RBP11.93□□□□□ -0.5
TOP3A-201ENST00000321105 PTK2Q05397 1052 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 SLC30A5Q8TAD4 765 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 HAUS1Q96CS2 278 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.93□□□□□ -0.5
TOP3A-201ENST00000321105 CSDE1O75534 798 aaKnown RBP11.92□□□□□ -0.5
TOP3A-201ENST00000321105 DDNO94850 711 aaPredicted RBP11.92□□□□□ -0.5
TOP3A-201ENST00000321105 FGGP02679 453 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 PSAPP07602 524 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 FXR2P51116 673 aaKnown RBP eCLIP11.92□□□□□ -0.53e-9■■■■■ 34.7
TOP3A-201ENST00000321105 LACTBP83111 547 aaPredicted RBP11.92□□□□□ -0.5
TOP3A-201ENST00000321105 CASP8Q14790 479 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 LIN9Q5TKA1 542 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 DLK2Q6UY11 383 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 ZNF280CQ8ND82 737 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 FAM163AQ96GL9 167 aaPredicted RBP11.92□□□□□ -0.5
TOP3A-201ENST00000321105 PSMD1Q99460 953 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 MSTO1Q9BUK6 570 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 BLOC1S4Q9NUP1 217 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 ATP8A1Q9Y2Q0 1164 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 TUBB2AQ13885 445 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 STXBP2Q15833 593 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 MIS18BP1Q6P0N0 1132 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 FAM84AQ96KN4 292 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 TUBB2BQ9BVA1 445 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 FAM204AQ9H8W3 233 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 CEP72Q9P209 647 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 TTLL3Q9Y4R7 772 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 MRFAP1Q9Y605 127 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 GOLGB1Q14789 3259 aaKnown RBP11.92□□□□□ -0.5
TOP3A-201ENST00000321105 ESYT2A0FGR8 921 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 TISP43B9A030 160 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 TADA3O75528 432 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 UCHL3P15374 230 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 E2F4Q16254 413 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 RINT1Q6NUQ1 792 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 SYCE1Q8N0S2 351 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 TMEM206Q9H813 350 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 HOXC10Q9NYD6 342 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 CACNA1FO60840 1977 aa11.92□□□□□ -0.5
TOP3A-201ENST00000321105 RNF225M0QZC1 329 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-201ENST00000321105 BRDTQ58F21 947 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-201ENST00000321105 RHPN2Q8IUC4 686 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 UNC45AQ9H3U1 944 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 PLCB1Q9NQ66 1216 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 PCDHA10Q9Y5I2 948 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 IKBKGQ9Y6K9 419 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 CCDC151A5D8V7 595 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 CYP26A1O43174 497 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 ATMINO43313 823 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-201ENST00000321105 VIMP08670 466 aaKnown RBP11.91□□□□□ -0.5
TOP3A-201ENST00000321105 VAMP7P51809 220 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 EPHA7Q15375 998 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 PPP1R13LQ8WUF5 828 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 PPP1R11O60927 126 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-201ENST00000321105 TUBBP07437 444 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 IREB2P48200 963 aaKnown RBP11.91□□□□□ -0.5
TOP3A-201ENST00000321105 CASP5P51878 434 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 MFAP3P55082 362 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 CC2D1AQ6P1N0 951 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-201ENST00000321105 TMEM270Q6UE05 265 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 LRRC71Q8N4P6 559 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 DAGLBQ8NCG7 672 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 SCFD1Q8WVM8 642 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 POP1Q99575 1024 aaKnown RBP11.91□□□□□ -0.5
TOP3A-201ENST00000321105 A0A087X0T9 212 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 A0A1W2PQC6 194 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 ZNF233A6NK53 670 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 PGK2P07205 417 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 FAM228BP0C875 321 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 KLRC1P26715 233 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 COPB2P35606 906 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 MTM1Q13496 603 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 CDKAL1Q5VV42 579 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 PDXDC1Q6P996 788 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 COG1Q8WTW3 980 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 CEP63Q96MT8 703 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 OSBPL9Q96SU4 736 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 DUSP9Q99956 384 aaKnown RBP11.91□□□□□ -0.5
TOP3A-201ENST00000321105 PACSIN1Q9BY11 444 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 TBC1D22BQ9NU19 505 aa11.91□□□□□ -0.5
TOP3A-201ENST00000321105 GAKO14976 1311 aa11.9□□□□□ -0.5
TOP3A-201ENST00000321105 SETD1AO15047 1707 aaKnown RBP11.9□□□□□ -0.5
TOP3A-201ENST00000321105 EBAG9O00559 213 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms