RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 PCDHB12Q9Y5F1 795 aa16.15■□□□□ 0.18
RPP40-201ENST00000319533 NID2Q14112 1375 aa16.14■□□□□ 0.17
RPP40-201ENST00000319533 EVPLQ92817 2033 aa16.14■□□□□ 0.17
RPP40-201ENST00000319533 FSD2A1L4K1 749 aa16.14■□□□□ 0.17
RPP40-201ENST00000319533 DENND3A2RUS2 1198 aa16.14■□□□□ 0.17
RPP40-201ENST00000319533 ADAMTS3O15072 1205 aa16.14■□□□□ 0.17
RPP40-201ENST00000319533 CDC45O75419 566 aa16.14■□□□□ 0.17
RPP40-201ENST00000319533 HMGB1P09429 215 aaKnown RBP16.14■□□□□ 0.17
RPP40-201ENST00000319533 ADD1P35611 737 aaKnown RBP16.14■□□□□ 0.17
RPP40-201ENST00000319533 SETQ01105 290 aaPredicted RBP16.14■□□□□ 0.17
RPP40-201ENST00000319533 FAM102BQ5T8I3 360 aa16.14■□□□□ 0.17
RPP40-201ENST00000319533 PDE12Q6L8Q7 609 aaKnown RBP16.14■□□□□ 0.17
RPP40-201ENST00000319533 FAM228AQ86W67 206 aa16.14■□□□□ 0.17
RPP40-201ENST00000319533 SMAP1Q8IYB5 467 aaPredicted RBP16.14■□□□□ 0.17
RPP40-201ENST00000319533 LINC01465Q8N7H1 131 aa16.14■□□□□ 0.17
RPP40-201ENST00000319533 KCNB2Q92953 911 aa16.14■□□□□ 0.17
RPP40-201ENST00000319533 MFSD14AQ96MC6 490 aa16.14■□□□□ 0.17
RPP40-201ENST00000319533 FBXL18Q96ME1 805 aa16.14■□□□□ 0.17
RPP40-201ENST00000319533 CDCA3Q99618 268 aaPredicted RBP16.14■□□□□ 0.17
RPP40-201ENST00000319533 ZNF577Q9BSK1 485 aa16.14■□□□□ 0.17
RPP40-201ENST00000319533 CWH43Q9H720 699 aa16.14■□□□□ 0.17
RPP40-201ENST00000319533 TMEM161AQ9NX61 479 aa16.14■□□□□ 0.17
RPP40-201ENST00000319533 GINS2Q9Y248 185 aa16.14■□□□□ 0.17
RPP40-201ENST00000319533 PCDHGC5Q9Y5F6 944 aa16.14■□□□□ 0.17
RPP40-201ENST00000319533 WDFY4Q6ZS81 3184 aa16.14■□□□□ 0.17
RPP40-201ENST00000319533 CCDC196A0A1B0GTZ2 297 aa16.13■□□□□ 0.17
RPP40-201ENST00000319533 TBKBP1A7MCY6 615 aa16.13■□□□□ 0.17
RPP40-201ENST00000319533 FSCN2O14926 492 aa16.13■□□□□ 0.17
RPP40-201ENST00000319533 FGF18O76093 207 aa16.13■□□□□ 0.17
RPP40-201ENST00000319533 CIITAP33076 1130 aa16.13■□□□□ 0.17
RPP40-201ENST00000319533 NHLH1Q02575 133 aa16.13■□□□□ 0.17
RPP40-201ENST00000319533 PKN1Q16512 942 aa16.13■□□□□ 0.17
RPP40-201ENST00000319533 KIZQ2M2Z5 673 aa16.13■□□□□ 0.17
RPP40-201ENST00000319533 RBM23Q86U06 439 aaKnown RBP16.13■□□□□ 0.17
RPP40-201ENST00000319533 ZNF710Q8N1W2 664 aa16.13■□□□□ 0.17
RPP40-201ENST00000319533 COLGALT1Q8NBJ5 622 aa16.13■□□□□ 0.17
RPP40-201ENST00000319533 TLE6Q9H808 572 aa16.13■□□□□ 0.17
RPP40-201ENST00000319533 ATP6V0A4Q9HBG4 840 aa16.13■□□□□ 0.17
RPP40-201ENST00000319533 TLR9Q9NR96 1032 aa16.13■□□□□ 0.17
RPP40-201ENST00000319533 TYW1Q9NV66 732 aaKnown RBP16.13■□□□□ 0.17
RPP40-201ENST00000319533 CEP131Q9UPN4 1083 aa16.13■□□□□ 0.17
RPP40-201ENST00000319533 LZTS1Q9Y250 596 aa16.13■□□□□ 0.17
RPP40-201ENST00000319533 USP15Q9Y4E8 981 aaPredicted RBP16.13■□□□□ 0.17
RPP40-201ENST00000319533 PCDHA10Q9Y5I2 948 aa16.13■□□□□ 0.17
RPP40-201ENST00000319533 MAGEB2O15479 319 aa16.12■□□□□ 0.17
RPP40-201ENST00000319533 PSAPP07602 524 aa16.12■□□□□ 0.17
RPP40-201ENST00000319533 ATF7P17544 494 aaPredicted RBP16.12■□□□□ 0.17
RPP40-201ENST00000319533 ERVFC1P60507 584 aa16.12■□□□□ 0.17
RPP40-201ENST00000319533 PLCB3Q01970 1234 aa16.12■□□□□ 0.17
RPP40-201ENST00000319533 KCNC3Q14003 757 aa16.12■□□□□ 0.17
RPP40-201ENST00000319533 DUSP6Q16828 381 aa16.12■□□□□ 0.17
RPP40-201ENST00000319533 TMEM184AQ6ZMB5 413 aa16.12■□□□□ 0.17
RPP40-201ENST00000319533 ALYREFQ86V81 257 aaKnown RBP16.12■□□□□ 0.17
RPP40-201ENST00000319533 REXO1Q8N1G1 1221 aaKnown RBP16.12■□□□□ 0.17
RPP40-201ENST00000319533 FBXL16Q8N461 479 aa16.12■□□□□ 0.17
RPP40-201ENST00000319533 VN1R2Q8NFZ6 395 aa16.12■□□□□ 0.17
RPP40-201ENST00000319533 CCDC12Q8WUD4 166 aaPredicted RBP16.12■□□□□ 0.17
RPP40-201ENST00000319533 SUSD6Q92537 303 aa16.12■□□□□ 0.17
RPP40-201ENST00000319533 LENG9Q96B70 501 aa16.12■□□□□ 0.17
RPP40-201ENST00000319533 OSMRQ99650 979 aa16.12■□□□□ 0.17
RPP40-201ENST00000319533 C6orf50Q9HD87 102 aa16.12■□□□□ 0.17
RPP40-201ENST00000319533 BARX2Q9UMQ3 279 aaPredicted RBP16.12■□□□□ 0.17
RPP40-201ENST00000319533 MYH9P35579 1960 aaKnown RBP16.11■□□□□ 0.17
RPP40-201ENST00000319533 PRPF3O43395 683 aaKnown RBP16.11■□□□□ 0.17
RPP40-201ENST00000319533 EDIL3O43854 480 aa16.11■□□□□ 0.17
RPP40-201ENST00000319533 PPFIA3O75145 1194 aa16.11■□□□□ 0.17
RPP40-201ENST00000319533 VTNP04004 478 aa16.11■□□□□ 0.17
RPP40-201ENST00000319533 LAG3P18627 525 aa16.11■□□□□ 0.17
RPP40-201ENST00000319533 METAP2P50579 478 aaKnown RBP eCLIP16.11■□□□□ 0.17
RPP40-201ENST00000319533 SPOUT1Q5T280 376 aaKnown RBP16.11■□□□□ 0.17
RPP40-201ENST00000319533 CKAP2LQ8IYA6 745 aa16.11■□□□□ 0.17
RPP40-201ENST00000319533 RASGRP4Q8TDF6 673 aa16.11■□□□□ 0.17
RPP40-201ENST00000319533 FAM167AQ96KS9 214 aa16.11■□□□□ 0.17
RPP40-201ENST00000319533 PHF7Q9BWX1 381 aaPredicted RBP16.11■□□□□ 0.17
RPP40-201ENST00000319533 TMEM117Q9H0C3 514 aa16.11■□□□□ 0.17
RPP40-201ENST00000319533 ADAMTS10Q9H324 1103 aa16.11■□□□□ 0.17
RPP40-201ENST00000319533 RNF19AQ9NV58 838 aa16.11■□□□□ 0.17
RPP40-201ENST00000319533 HCSTQ9UBK5 93 aa16.11■□□□□ 0.17
RPP40-201ENST00000319533 GABBR1Q9UBS5 961 aa16.11■□□□□ 0.17
RPP40-201ENST00000319533 PER2O15055 1255 aa16.1■□□□□ 0.17
RPP40-201ENST00000319533 FGFR1P11362 822 aa16.1■□□□□ 0.17
RPP40-201ENST00000319533 GNA11P29992 359 aa16.1■□□□□ 0.17
RPP40-201ENST00000319533 APOBRQ0VD83 1088 aa16.1■□□□□ 0.17
RPP40-201ENST00000319533 TRIM67Q6ZTA4 783 aa16.1■□□□□ 0.17
RPP40-201ENST00000319533 THNSL1Q8IYQ7 743 aa16.1■□□□□ 0.17
RPP40-201ENST00000319533 MICAL1Q8TDZ2 1067 aa16.1■□□□□ 0.17
RPP40-201ENST00000319533 MRPS27Q92552 414 aaKnown RBP16.1■□□□□ 0.17
RPP40-201ENST00000319533 CASD1Q96PB1 797 aa16.1■□□□□ 0.17
RPP40-201ENST00000319533 AGXT2Q9BYV1 514 aa16.1■□□□□ 0.17
RPP40-201ENST00000319533 S1PR5Q9H228 398 aa16.1■□□□□ 0.17
RPP40-201ENST00000319533 WDR64B1ANS9 1081 aa16.09■□□□□ 0.17
RPP40-201ENST00000319533 HOXA2O43364 376 aa16.09■□□□□ 0.17
RPP40-201ENST00000319533 ZNF862O60290 1169 aa16.09■□□□□ 0.17
RPP40-201ENST00000319533 EIF4BP23588 611 aaKnown RBP16.09■□□□□ 0.17
RPP40-201ENST00000319533 MRE11P49959 708 aa16.09■□□□□ 0.17
RPP40-201ENST00000319533 CLCN3P51790 818 aa16.09■□□□□ 0.17
RPP40-201ENST00000319533 ZXDAP98168 799 aa16.09■□□□□ 0.17
RPP40-201ENST00000319533 RBM10P98175 930 aaKnown RBP16.09■□□□□ 0.17
RPP40-201ENST00000319533 NTRK3Q16288 839 aa16.09■□□□□ 0.17
RPP40-201ENST00000319533 PRR16Q569H4 304 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms