RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 CNTNAP1P78357 1384 aa22.64■■□□□ 1.22
CPNE7-202ENST00000319518 POLD1P28340 1107 aa22.64■■□□□ 1.21
CPNE7-202ENST00000319518 LSP1P33241 339 aa22.64■■□□□ 1.21
CPNE7-202ENST00000319518 ARHGAP4P98171 946 aa22.64■■□□□ 1.21
CPNE7-202ENST00000319518 GJB7Q6PEY0 223 aa22.64■■□□□ 1.21
CPNE7-202ENST00000319518 DDX42Q86XP3 938 aaKnown RBP eCLIP22.64■■□□□ 1.21
CPNE7-202ENST00000319518 MICALL1Q8N3F8 863 aa22.64■■□□□ 1.21
CPNE7-202ENST00000319518 METTL13Q8N6R0 699 aa22.64■■□□□ 1.21
CPNE7-202ENST00000319518 SYT2Q8N9I0 419 aaPredicted RBP22.64■■□□□ 1.21
CPNE7-202ENST00000319518 AP1M1Q9BXS5 423 aa22.64■■□□□ 1.21
CPNE7-202ENST00000319518 NEUROG2Q9H2A3 272 aa22.64■■□□□ 1.21
CPNE7-202ENST00000319518 PLAAQ9Y263 795 aa22.64■■□□□ 1.21
CPNE7-202ENST00000319518 ASTN1O14525 1302 aa22.64■■□□□ 1.21
CPNE7-202ENST00000319518 NDUFAB1O14561 156 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 ZEB2O60315 1214 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 NR1D1P20393 614 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 HOXA13P31271 388 aaPredicted RBP22.63■■□□□ 1.21
CPNE7-202ENST00000319518 PRKCIP41743 596 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 ZYXQ15942 572 aaKnown RBP22.63■■□□□ 1.21
CPNE7-202ENST00000319518 UAP1Q16222 522 aaPredicted RBP22.63■■□□□ 1.21
CPNE7-202ENST00000319518 C10orf76Q5T2E6 689 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 TPCN2Q8NHX9 752 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 OLIG1Q8TAK6 271 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 ACTRT1Q8TDG2 376 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 TAF4BQ92750 862 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 PSMD1Q99460 953 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 AMNQ9BXJ7 453 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 FAM86B1E9PN63 330 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 SLC26A4O43511 780 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 CEP104O60308 925 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 FAM86B2P0C5J1 330 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 JAM2P57087 298 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 DCAF17Q5H9S7 520 aaPredicted RBP22.63■■□□□ 1.21
CPNE7-202ENST00000319518 SAMD1Q6SPF0 538 aaPredicted RBP22.63■■□□□ 1.21
CPNE7-202ENST00000319518 FBXO11Q86XK2 927 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 SLFN12Q8IYM2 578 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 OGFOD1Q8N543 542 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 ATP6V1G3Q96LB4 118 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 IKZF4Q9H2S9 585 aa22.63■■□□□ 1.21
CPNE7-202ENST00000319518 H0YGN5 161 aa22.62■■□□□ 1.21
CPNE7-202ENST00000319518 RPA1P27694 616 aa22.62■■□□□ 1.21
CPNE7-202ENST00000319518 SLC35C1Q96A29 364 aa22.62■■□□□ 1.21
CPNE7-202ENST00000319518 FAM107BQ9H098 131 aa22.62■■□□□ 1.21
CPNE7-202ENST00000319518 NFS1Q9Y697 457 aa22.62■■□□□ 1.21
CPNE7-202ENST00000319518 OPLAHO14841 1288 aa22.62■■□□□ 1.21
CPNE7-202ENST00000319518 XRCC5P13010 732 aaKnown RBP22.62■■□□□ 1.21
CPNE7-202ENST00000319518 ITGB3BPQ13352 177 aaPredicted RBP22.62■■□□□ 1.21
CPNE7-202ENST00000319518 BZW2Q9Y6E2 419 aaKnown RBP22.62■■□□□ 1.21
CPNE7-202ENST00000319518 PDXKO00764 312 aa22.61■■□□□ 1.21
CPNE7-202ENST00000319518 HSD17B3P37058 310 aa22.61■■□□□ 1.21
CPNE7-202ENST00000319518 MOXD1Q6UVY6 613 aa22.61■■□□□ 1.21
CPNE7-202ENST00000319518 C1orf131Q8NDD1 294 aaKnown RBP22.61■■□□□ 1.21
CPNE7-202ENST00000319518 OR2W6PQ8NHA6 318 aa22.61■■□□□ 1.21
CPNE7-202ENST00000319518 PBKQ96KB5 322 aa22.61■■□□□ 1.21
CPNE7-202ENST00000319518 RUSC1Q9BVN2 902 aa22.61■■□□□ 1.21
CPNE7-202ENST00000319518 DDX47Q9H0S4 455 aaKnown RBP22.61■■□□□ 1.21
CPNE7-202ENST00000319518 PRR12Q9ULL5 1215 aa22.61■■□□□ 1.21
CPNE7-202ENST00000319518 STXBP5LQ9Y2K9 1186 aa22.61■■□□□ 1.21
CPNE7-202ENST00000319518 NOC2LQ9Y3T9 749 aaKnown RBP22.61■■□□□ 1.21
CPNE7-202ENST00000319518 PSME4Q14997 1843 aa22.61■■□□□ 1.21
CPNE7-202ENST00000319518 A6NNZ2 444 aa22.61■■□□□ 1.21
CPNE7-202ENST00000319518 DDX3XO00571 662 aaKnown RBP eCLIP22.61■■□□□ 1.213e-6■■■□□ 15.8
CPNE7-202ENST00000319518 SART1O43290 800 aaKnown RBP22.61■■□□□ 1.21
CPNE7-202ENST00000319518 ITGA4P13612 1032 aa22.61■■□□□ 1.21
CPNE7-202ENST00000319518 FLT3P36888 993 aa22.61■■□□□ 1.21
CPNE7-202ENST00000319518 TUBB8Q3ZCM7 444 aa22.61■■□□□ 1.21
CPNE7-202ENST00000319518 CEP85LQ5SZL2 805 aa22.61■■□□□ 1.21
CPNE7-202ENST00000319518 SLFN11Q7Z7L1 901 aa22.61■■□□□ 1.21
CPNE7-202ENST00000319518 FAM151AQ8WW52 585 aa22.61■■□□□ 1.21
CPNE7-202ENST00000319518 TMBIM4Q9HC24 238 aa22.61■■□□□ 1.21
CPNE7-202ENST00000319518 DNM3Q9UQ16 869 aa22.61■■□□□ 1.21
CPNE7-202ENST00000319518 NR3C1P04150 777 aa22.6■■□□□ 1.21
CPNE7-202ENST00000319518 CYP4A11Q02928 519 aa22.6■■□□□ 1.21
CPNE7-202ENST00000319518 HLTFQ14527 1009 aaKnown RBP eCLIP22.6■■□□□ 1.21
CPNE7-202ENST00000319518 SPDYE2Q495Y8 402 aa22.6■■□□□ 1.21
CPNE7-202ENST00000319518 EPN3Q9H201 632 aa22.6■■□□□ 1.21
CPNE7-202ENST00000319518 HERC5Q9UII4 1024 aaKnown RBP22.6■■□□□ 1.21
CPNE7-202ENST00000319518 CLIC2O15247 247 aa22.6■■□□□ 1.21
CPNE7-202ENST00000319518 ERLIN2O94905 339 aa22.6■■□□□ 1.21
CPNE7-202ENST00000319518 BAG6P46379 1132 aa22.6■■□□□ 1.21
CPNE7-202ENST00000319518 SEC24CP53992 1094 aa22.6■■□□□ 1.21
CPNE7-202ENST00000319518 BMT2Q1RMZ1 405 aa22.6■■□□□ 1.21
CPNE7-202ENST00000319518 Q4G0T1 1027 aa22.6■■□□□ 1.21
CPNE7-202ENST00000319518 MAATS1Q7Z4T9 603 aa22.6■■□□□ 1.21
CPNE7-202ENST00000319518 CYP2W1Q8TAV3 490 aa22.6■■□□□ 1.21
CPNE7-202ENST00000319518 GLT8D2Q9H1C3 349 aa22.6■■□□□ 1.21
CPNE7-202ENST00000319518 PPP1R37O75864 691 aa22.59■■□□□ 1.21
CPNE7-202ENST00000319518 ZBTB7AO95365 584 aa22.59■■□□□ 1.21
CPNE7-202ENST00000319518 AP3B2Q13367 1082 aa22.59■■□□□ 1.21
CPNE7-202ENST00000319518 PTGISQ16647 500 aa22.59■■□□□ 1.21
CPNE7-202ENST00000319518 NBPF9Q3BBW0 867 aa22.59■■□□□ 1.21
CPNE7-202ENST00000319518 TCERG1LQ5VWI1 586 aa22.59■■□□□ 1.21
CPNE7-202ENST00000319518 NAA35Q5VZE5 725 aa22.59■■□□□ 1.21
CPNE7-202ENST00000319518 EIF1ADQ8N9N8 165 aaKnown RBP22.59■■□□□ 1.21
CPNE7-202ENST00000319518 BORCS6Q96GS4 357 aa22.59■■□□□ 1.21
CPNE7-202ENST00000319518 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.59■■□□□ 1.217e-7■■□□□ 11.4
CPNE7-202ENST00000319518 GLIS2Q9BZE0 524 aaPredicted RBP22.59■■□□□ 1.21
CPNE7-202ENST00000319518 TYW1Q9NV66 732 aaKnown RBP22.59■■□□□ 1.21
CPNE7-202ENST00000319518 GCNT4Q9P109 453 aa22.59■■□□□ 1.21
CPNE7-202ENST00000319518 FBXL5Q9UKA1 691 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms