RNA–Protein interactions for RNA: ENST00000319406.8

LCLAT1-202, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2 BASIC

Gene LCLAT1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-202ENST00000319406 FBXO11Q86XK2 927 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 PCMTD1Q96MG8 357 aaPredicted RBP11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 UIMC1Q96RL1 719 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 SH2D4AQ9H788 454 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 KIF9Q9HAQ2 790 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 SLC12A6Q9UHW9 1150 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 SRRM3A6NNA2 597 aaPredicted RBP11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 RBAK-RBAKDNI3L0D1 243 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 PIK3CDO00329 1044 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 PJA2O43164 708 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 TRAPPC3O43617 180 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 GH2P01242 217 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 CYP3A4P08684 503 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 RPA1P27694 616 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 CHRNA5P30532 468 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 RBM5P52756 815 aaKnown RBP eCLIP11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 PSMC6P62333 389 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 ELF3P78545 371 aaPredicted RBP11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 SARNPP82979 210 aaKnown RBP11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 CACNB1Q02641 598 aaPredicted RBP11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 DPY19L2P1Q6NXN4 242 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 EPM2AIP1Q7L775 607 aaPredicted RBP11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 CCDC65Q8IXS2 484 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 MREGQ8N565 214 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 CASKIN2Q8WXE0 1202 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 STAMBPL1Q96FJ0 436 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 THOC1Q96FV9 657 aaKnown RBP11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 CCDC42Q96M95 316 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 TSGA10Q9BZW7 698 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 TMBIM4Q9HC24 238 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 KIF13BQ9NQT8 1826 aa11.08□□□□□ -0.64
LCLAT1-202ENST00000319406 SSU72P8A0A1W2PR75 194 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 KLHL33A6NCF5 533 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 HMGB1P1B2RPK0 211 aaPredicted RBP11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 TLR2O60603 784 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 TACC1O75410 805 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 HEXIM1O94992 359 aaKnown RBP11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 ATP6V1G2O95670 118 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 FOSP01100 380 aaPredicted RBP11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 BMP3P12645 472 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 HOXD13P35453 343 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 EIF4A3P38919 411 aaKnown RBP11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 CASP5P51878 434 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 SLC8A3P57103 927 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 GIT2Q14161 759 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 EDRF1Q3B7T1 1238 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 LACTB2Q53H82 288 aaPredicted RBP11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 PRR16Q569H4 304 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 KIAA1755Q5JYT7 1200 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 CCDC181Q5TID7 509 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 GPIHBP1Q8IV16 184 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 SYT2Q8N9I0 419 aaPredicted RBP11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 C1orf131Q8NDD1 294 aaKnown RBP11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 OR2W6PQ8NHA6 318 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 TATDN2Q93075 761 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 TLR10Q9BXR5 811 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 MMRN2Q9H8L6 949 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 NOD2Q9HC29 1040 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 CNOT8Q9UFF9 292 aaKnown RBP11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 PLAAQ9Y263 795 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 HYOU1Q9Y4L1 999 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 PCDHA13Q9Y5I0 950 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 IGLV3-22A0A075B6J6 115 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 MSH4O15457 936 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 MARCH6O60337 910 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 TCP1P17987 556 aaKnown RBP11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 CDC25CP30307 473 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 SLC8A1P32418 973 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 ZKSCAN8Q15776 578 aaPredicted RBP11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 CDCA2Q69YH5 1023 aaPredicted RBP11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 IFT20Q8IY31 132 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 ARMC2Q8NEN0 867 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 NSMCE1Q8WV22 266 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 LMBR1Q8WVP7 490 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 CCT6BQ92526 530 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 SYN2Q92777 582 aaPredicted RBP11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 SPDL1Q96EA4 605 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 FAM20AQ96MK3 541 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 BMP2KQ9NSY1 1161 aaPredicted RBP11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 TBC1D7Q9P0N9 293 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 CEP72Q9P209 647 aa11.07□□□□□ -0.64
LCLAT1-202ENST00000319406 TRAF5O00463 557 aa11.06□□□□□ -0.64
LCLAT1-202ENST00000319406 IPO7O95373 1038 aaKnown RBP11.06□□□□□ -0.64
LCLAT1-202ENST00000319406 GNA14O95837 355 aa11.06□□□□□ -0.64
LCLAT1-202ENST00000319406 GCKP35557 465 aa11.06□□□□□ -0.64
LCLAT1-202ENST00000319406 KCTD19Q17RG1 926 aaPredicted RBP11.06□□□□□ -0.64
LCLAT1-202ENST00000319406 HERC4Q5GLZ8 1057 aaPredicted RBP11.06□□□□□ -0.64
LCLAT1-202ENST00000319406 PPP4R3CPQ6ZMV5 832 aa11.06□□□□□ -0.64
LCLAT1-202ENST00000319406 FAM43BQ6ZT52 329 aaPredicted RBP11.06□□□□□ -0.64
LCLAT1-202ENST00000319406 RRAGAQ7L523 313 aa11.06□□□□□ -0.64
LCLAT1-202ENST00000319406 ANKRD13CQ8N6S4 541 aa11.06□□□□□ -0.64
LCLAT1-202ENST00000319406 CNKSR1Q969H4 720 aa11.06□□□□□ -0.64
LCLAT1-202ENST00000319406 IFIH1Q9BYX4 1025 aaKnown RBP11.06□□□□□ -0.64
LCLAT1-202ENST00000319406 EMILIN3Q9NT22 766 aa11.06□□□□□ -0.64
LCLAT1-202ENST00000319406 PRR12Q9ULL5 1215 aa11.06□□□□□ -0.64
LCLAT1-202ENST00000319406 TRAF3IP3Q9Y228 551 aa11.06□□□□□ -0.64
LCLAT1-202ENST00000319406 COL4A5P29400 1685 aa11.06□□□□□ -0.64
LCLAT1-202ENST00000319406 ANKRD33BA6NCL7 494 aa11.06□□□□□ -0.64
LCLAT1-202ENST00000319406 C5orf60A6NFR6 353 aa11.06□□□□□ -0.64
LCLAT1-202ENST00000319406 H0YGN5 161 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms