RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 GNA11P29992 359 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 SARNPP82979 210 aaKnown RBP10.48□□□□□ -0.73
PTPRA-202ENST00000318266 IFI16Q16666 785 aaKnown RBP10.48□□□□□ -0.73
PTPRA-202ENST00000318266 ZCWPW2Q504Y3 356 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 CAPRIN2Q6IMN6 1127 aaKnown RBP10.48□□□□□ -0.73
PTPRA-202ENST00000318266 H2AFVQ71UI9 128 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 DGKHQ86XP1 1220 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 DZIP1Q86YF9 867 aaKnown RBP10.48□□□□□ -0.73
PTPRA-202ENST00000318266 P3H4Q92791 437 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 FAM114A2Q9NRY5 505 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 NOP53Q9NZM5 478 aaKnown RBP10.48□□□□□ -0.73
PTPRA-202ENST00000318266 CHORDC1Q9UHD1 332 aaPredicted RBP10.48□□□□□ -0.73
PTPRA-202ENST00000318266 DAAM1Q9Y4D1 1078 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 ZNF804BA4D1E1 1349 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 ABCB11O95342 1321 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 GRIN3BO60391 1043 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 NQO1P15559 274 aaKnown RBP10.48□□□□□ -0.73
PTPRA-202ENST00000318266 SLC8A3P57103 927 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 MAP2K1Q02750 393 aaPredicted RBP10.48□□□□□ -0.73
PTPRA-202ENST00000318266 UBE2SQ16763 222 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 GDAP1Q8TB36 358 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 PARD3BQ8TEW8 1205 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 EPB41L4BQ9H329 900 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 SLITRK6Q9H5Y7 841 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 ARHGEF10LQ9HCE6 1279 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 ATP8A2Q9NTI2 1148 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 HDAC9Q9UKV0 1011 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 PPP1R9AQ9ULJ8 1098 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 DOCK2Q92608 1830 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 TMEM110-MUSTN1A8MSY1 372 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 EVI5O60447 810 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 FLOT1O75955 427 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 CREB1P16220 341 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 NCALDP61601 193 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 DIXDC1Q155Q3 683 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 COBLL1Q53SF7 1204 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 GALNT17Q6IS24 598 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 NT5DC3Q86UY8 548 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 SLC17A8Q8NDX2 589 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 ARMC2Q8NEN0 867 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 ZNF483Q8TF39 744 aaPredicted RBP10.47□□□□□ -0.73
PTPRA-202ENST00000318266 DNAJC19Q96DA6 116 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 C18orf8Q96DM3 657 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 AMFRQ9UKV5 643 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 KIAA1024Q9UPX6 916 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 PTPN22Q9Y2R2 807 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 TCP11X1B4DZS4 312 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 PPFIA2O75334 1257 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 PTGER2P43116 358 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 CASP5P51878 434 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 EIF6P56537 245 aaKnown RBP10.47□□□□□ -0.73
PTPRA-202ENST00000318266 EXOC3L4Q17RC7 722 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 PIGWQ7Z7B1 504 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 GLYCTKQ8IVS8 523 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 MAPKAPK5Q8IW41 473 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 PROM2Q8N271 834 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 TGFBRAP1Q8WUH2 860 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 SGIP1Q9BQI5 828 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 PABPC3Q9H361 631 aaKnown RBP10.47□□□□□ -0.73
PTPRA-202ENST00000318266 BMP2KQ9NSY1 1161 aaPredicted RBP10.47□□□□□ -0.73
PTPRA-202ENST00000318266 DNAJC17Q9NVM6 304 aaKnown RBP10.47□□□□□ -0.73
PTPRA-202ENST00000318266 UBR2Q8IWV8 1755 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 MYH1P12882 1939 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 MYH4Q9Y623 1939 aa10.47□□□□□ -0.73
PTPRA-202ENST00000318266 CCDC169A6NNP5 214 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 RARAP10276 462 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 PLCG2P16885 1265 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 MMP13P45452 471 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 GALCP54803 685 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 EIF3BP55884 814 aaKnown RBP10.46□□□□□ -0.73
PTPRA-202ENST00000318266 DCAF12L1Q5VU92 463 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 NUGGCQ68CJ6 796 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 GPBP1Q86WP2 473 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 MAB21L3Q8N8X9 362 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 EIF1ADQ8N9N8 165 aaKnown RBP10.46□□□□□ -0.73
PTPRA-202ENST00000318266 SH3RF3Q8TEJ3 882 aaPredicted RBP10.46□□□□□ -0.73
PTPRA-202ENST00000318266 SCFD1Q8WVM8 642 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 CELF1Q92879 486 aaKnown RBP10.46□□□□□ -0.73
PTPRA-202ENST00000318266 MTMR9Q96QG7 549 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 RAB17Q9H0T7 212 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 EMILIN3Q9NT22 766 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 MYH3P11055 1940 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 POTEB3A0JP26 581 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 PALM3A6NDB9 673 aaPredicted RBP10.46□□□□□ -0.73
PTPRA-202ENST00000318266 POTECB2RU33 542 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 ERVV-1B6SEH8 477 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 DDX3XO00571 662 aaKnown RBP eCLIP10.46□□□□□ -0.732e-39■■■■□ 23.1
PTPRA-202ENST00000318266 CETN3O15182 167 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 POTEBQ6S5H4 581 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 L3MBTL3Q96JM7 780 aaPredicted RBP10.46□□□□□ -0.73
PTPRA-202ENST00000318266 PLCD4Q9BRC7 762 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 ERP44Q9BS26 406 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 RAB34Q9BZG1 259 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 KCNK9Q9NPC2 374 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 MINPP1Q9UNW1 487 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 BCS1LQ9Y276 419 aa10.46□□□□□ -0.73
PTPRA-202ENST00000318266 IGSF9BQ9UPX0 1349 aa10.46□□□□□ -0.74
PTPRA-202ENST00000318266 ASAP2O43150 1006 aa10.46□□□□□ -0.74
PTPRA-202ENST00000318266 IRX1P78414 480 aaPredicted RBP10.46□□□□□ -0.74
PTPRA-202ENST00000318266 ITIH4Q14624 930 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms