RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 CES2O00748 559 aa20.53■□□□□ 0.88
HERPUD2-201ENST00000311350 PAEPP09466 180 aa20.53■□□□□ 0.88
HERPUD2-201ENST00000311350 TNNC1P63316 161 aa20.53■□□□□ 0.88
HERPUD2-201ENST00000311350 NAB2Q15742 525 aa20.53■□□□□ 0.88
HERPUD2-201ENST00000311350 FAM133BQ5BKY9 247 aaKnown RBP20.53■□□□□ 0.88
HERPUD2-201ENST00000311350 BZW1Q7L1Q6 419 aaKnown RBP20.53■□□□□ 0.88
HERPUD2-201ENST00000311350 MAPKAPK5Q8IW41 473 aa20.53■□□□□ 0.88
HERPUD2-201ENST00000311350 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.53■□□□□ 0.88
HERPUD2-201ENST00000311350 DDX12PQ92771 950 aa20.53■□□□□ 0.88
HERPUD2-201ENST00000311350 FAM163AQ96GL9 167 aaPredicted RBP20.53■□□□□ 0.88
HERPUD2-201ENST00000311350 VPS33BQ9H267 617 aa20.53■□□□□ 0.88
HERPUD2-201ENST00000311350 TMEM59LQ9UK28 342 aa20.53■□□□□ 0.88
HERPUD2-201ENST00000311350 WDR90Q96KV7 1748 aa20.53■□□□□ 0.88
HERPUD2-201ENST00000311350 GHRP10912 638 aa20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 DIXDC1Q155Q3 683 aa20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 KRT71Q3SY84 523 aa20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 SFMBT2Q5VUG0 894 aa20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 RUFY4Q6ZNE9 571 aa20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 ZC3H3Q8IXZ2 948 aaKnown RBP20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 EIF1ADQ8N9N8 165 aaKnown RBP20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 CCDC63Q8NA47 563 aa20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 HOOK2Q96ED9 719 aa20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 DDX47Q9H0S4 455 aaKnown RBP20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 BTNL10A8MVZ5 291 aa20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 DAPK3O43293 454 aa20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 HSPA6P17066 643 aa20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 SNX29Q8TEQ0 813 aa20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 AGAP11Q8TF27 550 aa20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 TBC1D5Q92609 795 aa20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 GGT7Q9UJ14 662 aa20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 JAG2Q9Y219 1238 aa20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 C15orf41Q9Y2V0 281 aa20.52■□□□□ 0.88
HERPUD2-201ENST00000311350 COL4A5P29400 1685 aa20.52■□□□□ 0.87
HERPUD2-201ENST00000311350 EDIL3O43854 480 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 AOC3Q16853 763 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 NBPF9Q3BBW0 867 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 CHMP6Q96FZ7 201 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 ZNF570Q96NI8 536 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 NAP1L4Q99733 375 aaKnown RBP20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 PNMA2Q9UL42 364 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 AGAP1Q9UPQ3 857 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 TRPC6Q9Y210 931 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 PCDHGC5Q9Y5F6 944 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 SLC37A4O43826 429 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 CTNND1O60716 968 aaKnown RBP20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 SNHG28P0DPA3 235 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 BTDP43251 543 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 SARNPP82979 210 aaKnown RBP20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 ZKSCAN8Q15776 578 aaPredicted RBP20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 AGBL2Q5U5Z8 902 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 DYMQ7RTS9 669 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 ARMC2Q8NEN0 867 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 LRRC45Q96CN5 670 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 DNAJC19Q96DA6 116 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 CEP95Q96GE4 821 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 L3MBTL3Q96JM7 780 aaPredicted RBP20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 XPO6Q96QU8 1125 aaKnown RBP20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 CPVLQ9H3G5 476 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 TMEM260Q9NX78 707 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 SAP30BPQ9UHR5 308 aaKnown RBP20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 MTMR7Q9Y216 660 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 ATP8B3O60423 1300 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 KDM3AQ9Y4C1 1321 aa20.51■□□□□ 0.87
HERPUD2-201ENST00000311350 EIF4E1BA6NMX2 242 aaKnown RBP20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 ENO4A6NNW6 628 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 CEP104O60308 925 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 FSTL1Q12841 308 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 COASYQ13057 564 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 SLF2Q8IX21 1173 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 NIM1KQ8IY84 436 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 CCDC197Q8NCU1 140 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 TANGO6Q9C0B7 1094 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 A0A087X0T9 212 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 SART1O43290 800 aaKnown RBP20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 NOL4O94818 638 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 FAM228BP0C875 321 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 ITGA4P13612 1032 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 EIF6P56537 245 aaKnown RBP20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 GRIK5Q16478 980 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 KIAA0753Q2KHM9 967 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 FAM83BQ5T0W9 1011 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 C10orf76Q5T2E6 689 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 ERMARDQ5T6L9 678 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 PRCCQ92733 491 aaPredicted RBP20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 NT5C3AQ9H0P0 336 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 KANSL2Q9H9L4 492 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 AIPL1Q9NZN9 384 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 CEP350Q5VT06 3117 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 CDK5RAP2Q96SN8 1893 aa20.5■□□□□ 0.87
HERPUD2-201ENST00000311350 CDCA2Q69YH5 1023 aaPredicted RBP20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 CEP120Q8N960 986 aa20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 BMP2KQ9NSY1 1161 aaPredicted RBP20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 ANKIB1Q9P2G1 1089 aa20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 AMACRQ9UHK6 382 aa20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 SLC12A4Q9UP95 1085 aa20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 IQCA1LA6NCM1 817 aa20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 CAND2O75155 1236 aa20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 UPP2O95045 317 aa20.49■□□□□ 0.87
HERPUD2-201ENST00000311350 TDP2O95551 362 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms