RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 FAM207AQ9NSI2 230 aaPredicted RBP12.24□□□□□ -0.45
TRIM59-201ENST00000309784 DDX41Q9UJV9 622 aaKnown RBP12.24□□□□□ -0.45
TRIM59-201ENST00000309784 FRMD4BQ9Y2L6 1034 aa12.24□□□□□ -0.45
TRIM59-201ENST00000309784 AKR1B15C9JRZ8 316 aaPredicted RBP12.23□□□□□ -0.45
TRIM59-201ENST00000309784 DGAT1O75907 488 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 SYCP1Q15431 976 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 CACNA2D4Q7Z3S7 1137 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 HAUS6Q7Z4H7 955 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 MCPH1Q8NEM0 835 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 POLR3FQ9H1D9 316 aaPredicted RBP12.23□□□□□ -0.45
TRIM59-201ENST00000309784 IKZF4Q9H2S9 585 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 RRAGDQ9NQL2 400 aaPredicted RBP12.23□□□□□ -0.45
TRIM59-201ENST00000309784 ARMCX3Q9UH62 379 aaPredicted RBP12.23□□□□□ -0.45
TRIM59-201ENST00000309784 LIMA1Q9UHB6 759 aaKnown RBP12.23□□□□□ -0.45
TRIM59-201ENST00000309784 NR3C1P04150 777 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 HARSP12081 509 aaKnown RBP12.23□□□□□ -0.45
TRIM59-201ENST00000309784 GUCY2CP25092 1073 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 ICAM3P32942 547 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 DNM2P50570 870 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 PRAMEF19Q5SWL8 479 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 IFNL1Q8IU54 200 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 DEPTORQ8TB45 409 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 ZNF592Q92610 1267 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 TYW1Q9NV66 732 aaKnown RBP12.23□□□□□ -0.45
TRIM59-201ENST00000309784 PLS3P13797 630 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 CASP14P31944 242 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 NR1I3Q14994 352 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 ENOX2Q16206 610 aaKnown RBP12.23□□□□□ -0.45
TRIM59-201ENST00000309784 PPP1R16BQ96T49 567 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 MAF1Q9H063 256 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 GINS2Q9Y248 185 aa12.23□□□□□ -0.45
TRIM59-201ENST00000309784 INHBEP58166 350 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 EMC2Q15006 297 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 TMEM63BQ5T3F8 832 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 ARMCX5Q6P1M9 558 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 TCHPQ9BT92 498 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 KCNF1Q9H3M0 494 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 INTS13Q9NVM9 706 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 MORF4L1Q9UBU8 362 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 DENND3A2RUS2 1198 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 GH1P01241 217 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 EDNRBP24530 442 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 CYP2C19P33261 490 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 RBL2Q08999 1139 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 MAN2A1Q16706 1144 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 CELF3Q5SZQ8 465 aaKnown RBP12.22□□□□□ -0.45
TRIM59-201ENST00000309784 ZNF720Q7Z2F6 126 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 ACCSQ96QU6 501 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 TINF2Q9BSI4 451 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 NDST4Q9H3R1 872 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 OLFML3Q9NRN5 406 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 ZNHIT6Q9NWK9 470 aaKnown RBP12.22□□□□□ -0.45
TRIM59-201ENST00000309784 HNRNPDLO14979 420 aaKnown RBP12.22□□□□□ -0.45
TRIM59-201ENST00000309784 DYNC1LI2O43237 492 aaPredicted RBP12.22□□□□□ -0.45
TRIM59-201ENST00000309784 SLC10A3P09131 477 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 XRCC5P13010 732 aaKnown RBP12.22□□□□□ -0.45
TRIM59-201ENST00000309784 KRT9P35527 623 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 STRN3Q13033 797 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 CRHR2Q13324 411 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 PPP4R3CPQ6ZMV5 832 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 AFG1LQ8WV93 481 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 KIFAP3Q92845 792 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 ZIC5Q96T25 663 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 LUC7L2Q9Y383 392 aaKnown RBP12.22□□□□□ -0.45
TRIM59-201ENST00000309784 RLFQ13129 1914 aa12.22□□□□□ -0.45
TRIM59-201ENST00000309784 LGALS16A8MUM7 142 aa12.21□□□□□ -0.45
TRIM59-201ENST00000309784 KRT13P13646 458 aa12.21□□□□□ -0.45
TRIM59-201ENST00000309784 IRF2BP1Q8IU81 584 aa12.21□□□□□ -0.45
TRIM59-201ENST00000309784 ZNF397Q8NF99 534 aaPredicted RBP12.21□□□□□ -0.45
TRIM59-201ENST00000309784 OR6J1Q8NGC5 347 aa12.21□□□□□ -0.45
TRIM59-201ENST00000309784 BAG1Q99933 345 aaPredicted RBP12.21□□□□□ -0.45
TRIM59-201ENST00000309784 EXOC7Q9UPT5 735 aa12.21□□□□□ -0.45
TRIM59-201ENST00000309784 SYNGAP1Q96PV0 1343 aa12.21□□□□□ -0.45
TRIM59-201ENST00000309784 DNAJC25-GNG10A0A024R161 153 aa12.21□□□□□ -0.45
TRIM59-201ENST00000309784 GSTTP1A0A1W2PQM5 241 aa12.21□□□□□ -0.45
TRIM59-201ENST00000309784 PDXKO00764 312 aa12.21□□□□□ -0.45
TRIM59-201ENST00000309784 TLR2O60603 784 aa12.21□□□□□ -0.45
TRIM59-201ENST00000309784 LYPLA2O95372 231 aa12.21□□□□□ -0.45
TRIM59-201ENST00000309784 GNA14O95837 355 aa12.21□□□□□ -0.45
TRIM59-201ENST00000309784 SRGAP2CP0DJJ0 459 aa12.21□□□□□ -0.45
TRIM59-201ENST00000309784 LRRC71Q8N4P6 559 aa12.21□□□□□ -0.45
TRIM59-201ENST00000309784 MAML3Q96JK9 1138 aa12.21□□□□□ -0.45
TRIM59-201ENST00000309784 TLL2Q9Y6L7 1015 aa12.21□□□□□ -0.45
TRIM59-201ENST00000309784 GOLGA8IPA6NC78 632 aa12.21□□□□□ -0.46
TRIM59-201ENST00000309784 GOLGA8JA6NMD2 632 aa12.21□□□□□ -0.46
TRIM59-201ENST00000309784 EHHADHQ08426 723 aa12.21□□□□□ -0.46
TRIM59-201ENST00000309784 VWA3BQ502W6 1294 aa12.21□□□□□ -0.46
TRIM59-201ENST00000309784 FAM186BQ8IYM0 893 aa12.21□□□□□ -0.46
TRIM59-201ENST00000309784 FAM167AQ96KS9 214 aa12.21□□□□□ -0.46
TRIM59-201ENST00000309784 C16orf45Q96MC5 204 aaPredicted RBP12.21□□□□□ -0.46
TRIM59-201ENST00000309784 TMEM206Q9H813 350 aa12.21□□□□□ -0.46
TRIM59-201ENST00000309784 VTA1Q9NP79 307 aa12.21□□□□□ -0.46
TRIM59-201ENST00000309784 TOMM70O94826 608 aa12.2□□□□□ -0.46
TRIM59-201ENST00000309784 ZNF286BP0CG31 522 aa12.2□□□□□ -0.46
TRIM59-201ENST00000309784 ACVR2BQ13705 512 aa12.2□□□□□ -0.46
TRIM59-201ENST00000309784 NOLC1Q14978 699 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRIM59-201ENST00000309784 CNGA4Q8IV77 575 aa12.2□□□□□ -0.46
TRIM59-201ENST00000309784 TRAPPC12Q8WVT3 735 aa12.2□□□□□ -0.46
TRIM59-201ENST00000309784 SMARCAD1Q9H4L7 1026 aa12.2□□□□□ -0.46
TRIM59-201ENST00000309784 FRMD3A2A2Y4 597 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms