RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 SOWAHBA6NEL2 793 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 PES1O00541 588 aaKnown RBP13.22□□□□□ -0.29
TPM3-202ENST00000302206 HIP1RO75146 1068 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 PRPF6O94906 941 aaKnown RBP13.22□□□□□ -0.29
TPM3-202ENST00000302206 ATG7O95352 703 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 GCNT3O95395 438 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 TGFB3P10600 412 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 CETPP11597 493 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 ERCC3P19447 782 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 GOLGA8FQ08AF8 430 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 GOLGA8DPQ0D2H9 430 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 ADAM9Q13443 819 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 MYBPC2Q14324 1141 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 SYCP1Q15431 976 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 CCDC40Q4G0X9 1142 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 MIS18BP1Q6P0N0 1132 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 ABHD15Q6UXT9 468 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 FRMD5Q7Z6J6 570 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 FAM178BQ8IXR5 827 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 DAW1Q8N136 415 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 TMEM174Q8WUU8 243 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 PPP1R13BQ96KQ4 1090 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 DRC1Q96MC2 740 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 DNAJC7Q99615 494 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 PAGR1Q9BTK6 254 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 TTYH3Q9C0H2 523 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 ABHD10Q9NUJ1 306 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 LARSQ9P2J5 1176 aaKnown RBP13.22□□□□□ -0.29
TPM3-202ENST00000302206 CGNQ9P2M7 1197 aaKnown RBP13.22□□□□□ -0.29
TPM3-202ENST00000302206 LUC7L2Q9Y383 392 aaKnown RBP13.22□□□□□ -0.29
TPM3-202ENST00000302206 LRRC37A2A6NM11 1700 aa13.22□□□□□ -0.29
TPM3-202ENST00000302206 ASTN1O14525 1302 aa13.21□□□□□ -0.29
TPM3-202ENST00000302206 DNAJC25-GNG10A0A024R161 153 aa13.21□□□□□ -0.29
TPM3-202ENST00000302206 PPP1R37O75864 691 aa13.21□□□□□ -0.29
TPM3-202ENST00000302206 PLS3P13797 630 aa13.21□□□□□ -0.29
TPM3-202ENST00000302206 KRT9P35527 623 aa13.21□□□□□ -0.29
TPM3-202ENST00000302206 GTF2A2P52657 109 aa13.21□□□□□ -0.29
TPM3-202ENST00000302206 SNRPFP62306 86 aaKnown RBP13.21□□□□□ -0.29
TPM3-202ENST00000302206 ZBED6P86452 979 aa13.21□□□□□ -0.29
TPM3-202ENST00000302206 CNTN2Q02246 1040 aa13.21□□□□□ -0.29
TPM3-202ENST00000302206 PTPN14Q15678 1187 aa13.21□□□□□ -0.29
TPM3-202ENST00000302206 UGCGQ16739 394 aa13.21□□□□□ -0.29
TPM3-202ENST00000302206 ODR4Q5SWX8 454 aa13.21□□□□□ -0.29
TPM3-202ENST00000302206 KCNV1Q6PIU1 500 aa13.21□□□□□ -0.29
TPM3-202ENST00000302206 OR8K1Q8NGG5 319 aa13.21□□□□□ -0.29
TPM3-202ENST00000302206 MORC4Q8TE76 937 aa13.21□□□□□ -0.29
TPM3-202ENST00000302206 CCDC43Q96MW1 224 aaKnown RBP13.21□□□□□ -0.29
TPM3-202ENST00000302206 MKNK1Q9BUB5 465 aa13.21□□□□□ -0.29
TPM3-202ENST00000302206 METTL14Q9HCE5 456 aaKnown RBP13.21□□□□□ -0.29
TPM3-202ENST00000302206 SIK3Q9Y2K2 1263 aa13.21□□□□□ -0.29
TPM3-202ENST00000302206 IGSF9BQ9UPX0 1349 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 TTC26A0AVF1 554 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 USP27XA6NNY8 438 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 SFI1A8K8P3 1242 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 STBD1O95210 358 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 NR3C1P04150 777 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 SUPT20HL2P0C7V6 817 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 TNNT1P13805 278 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 NR2F2P24468 414 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 NMT1P30419 496 aaKnown RBP13.2□□□□□ -0.3
TPM3-202ENST00000302206 ACTR2P61160 394 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 TSR1Q2NL82 804 aaKnown RBP13.2□□□□□ -0.3
TPM3-202ENST00000302206 CYP26C1Q6V0L0 522 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 ANKRD23Q86SG2 305 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 SLC9A9Q8IVB4 645 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 ZNF397Q8NF99 534 aaPredicted RBP13.2□□□□□ -0.3
TPM3-202ENST00000302206 ZNF296Q8WUU4 475 aaPredicted RBP13.2□□□□□ -0.3
TPM3-202ENST00000302206 CPLX3Q8WVH0 158 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 HVCN1Q96D96 273 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 MS4A4AQ96JQ5 239 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 C17orf75Q9HAS0 396 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 TXNRD2Q9NNW7 524 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 GABBR1Q9UBS5 961 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 PPP2R2CQ9Y2T4 447 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 PAXBP1Q9Y5B6 917 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 ZMYM2Q9UBW7 1377 aa13.2□□□□□ -0.3
TPM3-202ENST00000302206 IGKV6D-21A0A0A0MT36 114 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 BACH1O14867 736 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 TGFB1I1O43294 461 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 TRIM21P19474 475 aaKnown RBP13.19□□□□□ -0.3
TPM3-202ENST00000302206 SCP2P22307 547 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 HNRNPH3P31942 346 aaKnown RBP13.19□□□□□ -0.3
TPM3-202ENST00000302206 ABCD1P33897 745 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 GCLCP48506 637 aaPredicted RBP13.19□□□□□ -0.3
TPM3-202ENST00000302206 RTP1P59025 263 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 ERVK-9P63128 1117 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 ERVK-24P63145 666 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 CCNA1P78396 465 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 CDK17Q00537 523 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 NEDD9Q14511 834 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 KCTD2Q14681 263 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 MEA1Q16626 185 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 XKR9Q5GH70 373 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 XKR3Q5GH77 459 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 FBXO46Q6PJ61 603 aaPredicted RBP13.19□□□□□ -0.3
TPM3-202ENST00000302206 HS2ST1Q7LGA3 356 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 RASAL3Q86YV0 1011 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 REXO1L1PQ8IX06 675 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 KIFAP3Q92845 792 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 EEF2KMTQ96G04 330 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms