RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 TRPM4Q8TD43 1214 aa9.02□□□□□ -0.96
SNRPD1-201ENST00000300413 LZTFL1Q9NQ48 299 aa9.02□□□□□ -0.96
SNRPD1-201ENST00000300413 RNASELQ05823 741 aaKnown RBP9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 PKN1Q16512 942 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 HAUS6Q7Z4H7 955 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 ZNF830Q96NB3 372 aaPredicted RBP9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 MED10Q9BTT4 135 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 MKNK1Q9BUB5 465 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 PRMT7Q9NVM4 692 aaPredicted RBP9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 STIM2Q9P246 746 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 MSH4O15457 936 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 DYNC1LI2O43237 492 aaPredicted RBP9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 OATP04181 439 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 SKIP12755 728 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 PRKCEQ02156 737 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 CACNB1Q02641 598 aaPredicted RBP9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 IFFO1Q0D2I5 559 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 METTL7BQ6UX53 244 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 PDZD4Q76G19 769 aaPredicted RBP9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 SND1Q7KZF4 910 aaKnown RBP eCLIP9.02□□□□□ -0.975e-8■□□□□ 9
SNRPD1-201ENST00000300413 PGBD4Q96DM1 585 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 GOLPH3LQ9H4A5 285 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 MTRF1LQ9UGC7 380 aaKnown RBP9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 ZNF541Q9H0D2 1346 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 SLC15A5A6NIM6 579 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 TFAMQ00059 246 aaKnown RBP9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 TYW1BQ6NUM6 668 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 C11orf57Q6ZUT1 292 aaPredicted RBP9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 GABPB2Q8TAK5 448 aaPredicted RBP9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 RNF34Q969K3 372 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 CCDC113Q9H0I3 377 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 ABHD16BQ9H3Z7 469 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 GCNT4Q9P109 453 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 MORC2Q9Y6X9 1032 aaPredicted RBP9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 COL1A1P02452 1464 aaPredicted RBP9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 IGSF9BQ9UPX0 1349 aa9.02□□□□□ -0.97
SNRPD1-201ENST00000300413 TMEM110-MUSTN1A8MSY1 372 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 LGALS16A8MUM7 142 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 KIF11P52732 1056 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 ERVK-9P63128 1117 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 ERVK-24P63145 666 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 ANKRD23Q86SG2 305 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 ZFPM1Q8IX07 1006 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 GPD1LQ8N335 351 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 ZNF560Q96MR9 790 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 SUCLA2Q9P2R7 463 aaPredicted RBP9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 PCDHB4Q9Y5E5 795 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 NUP188Q5SRE5 1749 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 CLIC2O15247 247 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 SUPT20HL2P0C7V6 817 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 CYP11B2P19099 503 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 EMC2Q15006 297 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 CCDC14Q49A88 953 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 ZNF667Q5HYK9 610 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 C4orf19Q8IY42 314 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 SYT2Q8N9I0 419 aaPredicted RBP9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 PANX2Q96RD6 677 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 TUBE1Q9UJT0 475 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 AMFRQ9UKV5 643 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 SLC16A4O15374 487 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 MSCO60682 206 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 GAS8O95995 478 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 C6orf222P0C671 652 aaPredicted RBP9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 ATP2A2P16615 1042 aaKnown RBP9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 ANXA13P27216 316 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 CLCN1P35523 988 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 ACTR2P61160 394 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 RPS6KA1Q15418 735 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 RHPN2Q8IUC4 686 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 VSTM4Q8IW00 320 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 U2AF1L4Q8WU68 220 aaKnown RBP9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 GLT1D1Q96MS3 346 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 NACA2Q9H009 215 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 STMN4Q9H169 189 aaPredicted RBP9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 DBR1Q9UK59 544 aaKnown RBP9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 NID2Q14112 1375 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 GPC3P51654 580 aa9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 TWF2Q6IBS0 349 aaKnown RBP9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 MRPL47Q9HD33 250 aaKnown RBP9.01□□□□□ -0.97
SNRPD1-201ENST00000300413 A0A1W2PQC6 194 aa9□□□□□ -0.97
SNRPD1-201ENST00000300413 SERPING1P05155 500 aa9□□□□□ -0.97
SNRPD1-201ENST00000300413 PRKCBP05771 671 aa9□□□□□ -0.97
SNRPD1-201ENST00000300413 SNHG28P0DPA3 235 aa9□□□□□ -0.97
SNRPD1-201ENST00000300413 MAPTP10636 758 aaKnown RBP9□□□□□ -0.97
SNRPD1-201ENST00000300413 CIITAP33076 1130 aa9□□□□□ -0.97
SNRPD1-201ENST00000300413 PLCB3Q01970 1234 aa9□□□□□ -0.97
SNRPD1-201ENST00000300413 DPYDQ12882 1025 aa9□□□□□ -0.97
SNRPD1-201ENST00000300413 LRMPQ12912 555 aa9□□□□□ -0.97
SNRPD1-201ENST00000300413 PTPAQ15257 358 aa9□□□□□ -0.97
SNRPD1-201ENST00000300413 GSTA5Q7RTV2 222 aa9□□□□□ -0.97
SNRPD1-201ENST00000300413 PEX26Q7Z412 305 aa9□□□□□ -0.97
SNRPD1-201ENST00000300413 NSMCE1Q8WV22 266 aa9□□□□□ -0.97
SNRPD1-201ENST00000300413 WNK4Q96J92 1243 aa9□□□□□ -0.97
SNRPD1-201ENST00000300413 THAP12O43422 761 aa9□□□□□ -0.97
SNRPD1-201ENST00000300413 IL18RAPO95256 599 aa9□□□□□ -0.97
SNRPD1-201ENST00000300413 PRCPP42785 496 aa9□□□□□ -0.97
SNRPD1-201ENST00000300413 CALCOCO2Q13137 446 aa9□□□□□ -0.97
SNRPD1-201ENST00000300413 THEM5Q8N1Q8 247 aa9□□□□□ -0.97
SNRPD1-201ENST00000300413 C12orf42Q96LP6 360 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms