RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 TRAPPC3O43617 180 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 FAM228BP0C875 321 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 KLRC1P26715 233 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 PABPC4Q13310 644 aaKnown RBP eCLIP16.98■□□□□ 0.31
UBAP1-201ENST00000297661 ADAM9Q13443 819 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 TRADDQ15628 312 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 ACCSLQ4AC99 568 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 C3orf20Q8ND61 904 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 NOX5Q96PH1 765 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 ZC3H12CQ9C0D7 883 aaKnown RBP16.98■□□□□ 0.31
UBAP1-201ENST00000297661 DNAJC18Q9H819 358 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 EMILIN3Q9NT22 766 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 PLIN4Q96Q06 1357 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 ADAMTSL1Q8N6G6 1762 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 MGRN1O60291 552 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 CYP11B2P19099 503 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 CYP4A11Q02928 519 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 PSMD2Q13200 908 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 SLC9C1Q4G0N8 1177 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 ARSHQ5FYA8 562 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 LARGE2Q8N3Y3 721 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 TBC1D31Q96DN5 1066 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 IKZF4Q9H2S9 585 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 PCDHA2Q9Y5H9 948 aa16.98■□□□□ 0.31
UBAP1-201ENST00000297661 EEF2P13639 858 aaKnown RBP16.97■□□□□ 0.31
UBAP1-201ENST00000297661 TMOD1P28289 359 aa16.97■□□□□ 0.31
UBAP1-201ENST00000297661 SLC8A3P57103 927 aa16.97■□□□□ 0.31
UBAP1-201ENST00000297661 BIRC2Q13490 618 aa16.97■□□□□ 0.31
UBAP1-201ENST00000297661 CACNA2D3Q8IZS8 1091 aa16.97■□□□□ 0.31
UBAP1-201ENST00000297661 RNF217Q8TC41 542 aa16.97■□□□□ 0.31
UBAP1-201ENST00000297661 WHAMMQ8TF30 809 aa16.97■□□□□ 0.31
UBAP1-201ENST00000297661 SLC12A6Q9UHW9 1150 aa16.97■□□□□ 0.31
UBAP1-201ENST00000297661 EPS15P42566 896 aa16.97■□□□□ 0.31
UBAP1-201ENST00000297661 BYSLQ13895 437 aaKnown RBP16.97■□□□□ 0.31
UBAP1-201ENST00000297661 ZKSCAN8Q15776 578 aaPredicted RBP16.97■□□□□ 0.31
UBAP1-201ENST00000297661 LACTB2Q53H82 288 aaPredicted RBP16.97■□□□□ 0.31
UBAP1-201ENST00000297661 KIAA0825Q8IV33 1275 aa16.97■□□□□ 0.31
UBAP1-201ENST00000297661 CCDC65Q8IXS2 484 aa16.97■□□□□ 0.31
UBAP1-201ENST00000297661 RTKN2Q8IZC4 609 aa16.97■□□□□ 0.31
UBAP1-201ENST00000297661 PROCA1Q8NCQ7 364 aaPredicted RBP16.97■□□□□ 0.31
UBAP1-201ENST00000297661 RSRC1Q96IZ7 334 aaKnown RBP16.97■□□□□ 0.31
UBAP1-201ENST00000297661 ANO3Q9BYT9 981 aa16.97■□□□□ 0.31
UBAP1-201ENST00000297661 CEP72Q9P209 647 aa16.97■□□□□ 0.31
UBAP1-201ENST00000297661 G3V3G9 751 aa16.96■□□□□ 0.31
UBAP1-201ENST00000297661 GCOM1H8Y6P7 765 aaPredicted RBP16.96■□□□□ 0.31
UBAP1-201ENST00000297661 MYZAPP0CAP1 466 aa16.96■□□□□ 0.31
UBAP1-201ENST00000297661 GRIK3Q13003 919 aa16.96■□□□□ 0.31
UBAP1-201ENST00000297661 CDC37Q16543 378 aaPredicted RBP16.96■□□□□ 0.31
UBAP1-201ENST00000297661 DCAF8Q5TAQ9 597 aa16.96■□□□□ 0.31
UBAP1-201ENST00000297661 APOBEC3HQ6NTF7 200 aaKnown RBP16.96■□□□□ 0.31
UBAP1-201ENST00000297661 RNF181Q9P0P0 153 aa16.96■□□□□ 0.31
UBAP1-201ENST00000297661 COL4A5P29400 1685 aa16.96■□□□□ 0.31
UBAP1-201ENST00000297661 GDF11O95390 407 aa16.96■□□□□ 0.3
UBAP1-201ENST00000297661 SLC9A1P19634 815 aa16.96■□□□□ 0.3
UBAP1-201ENST00000297661 RBM5P52756 815 aaKnown RBP eCLIP16.96■□□□□ 0.3
UBAP1-201ENST00000297661 SARNPP82979 210 aaKnown RBP16.96■□□□□ 0.3
UBAP1-201ENST00000297661 IKQ13123 557 aaPredicted RBP16.96■□□□□ 0.3
UBAP1-201ENST00000297661 KIAA0753Q2KHM9 967 aa16.96■□□□□ 0.3
UBAP1-201ENST00000297661 TRIM59Q8IWR1 403 aa16.96■□□□□ 0.3
UBAP1-201ENST00000297661 MAB21L3Q8N8X9 362 aa16.96■□□□□ 0.3
UBAP1-201ENST00000297661 CYP2W1Q8TAV3 490 aa16.96■□□□□ 0.3
UBAP1-201ENST00000297661 KRT12Q99456 494 aa16.96■□□□□ 0.3
UBAP1-201ENST00000297661 LRRC27Q9C0I9 530 aa16.96■□□□□ 0.3
UBAP1-201ENST00000297661 KCTD10Q9H3F6 313 aa16.96■□□□□ 0.3
UBAP1-201ENST00000297661 NOD2Q9HC29 1040 aa16.96■□□□□ 0.3
UBAP1-201ENST00000297661 RSPH10B2B2RC85 870 aa16.95■□□□□ 0.3
UBAP1-201ENST00000297661 ATP6V1G2O95670 118 aa16.95■□□□□ 0.3
UBAP1-201ENST00000297661 RSPH10BP0C881 870 aa16.95■□□□□ 0.3
UBAP1-201ENST00000297661 NR2F2P24468 414 aa16.95■□□□□ 0.3
UBAP1-201ENST00000297661 HOXA13P31271 388 aaPredicted RBP16.95■□□□□ 0.3
UBAP1-201ENST00000297661 KLHL30Q0D2K2 578 aa16.95■□□□□ 0.3
UBAP1-201ENST00000297661 KCNH2Q12809 1159 aa16.95■□□□□ 0.3
UBAP1-201ENST00000297661 NBPF9Q3BBW0 867 aa16.95■□□□□ 0.3
UBAP1-201ENST00000297661 CATSPER3Q86XQ3 398 aa16.95■□□□□ 0.3
UBAP1-201ENST00000297661 OR2W6PQ8NHA6 318 aa16.95■□□□□ 0.3
UBAP1-201ENST00000297661 HVCN1Q96D96 273 aa16.95■□□□□ 0.3
UBAP1-201ENST00000297661 BAIAP2L1Q9UHR4 511 aa16.95■□□□□ 0.3
UBAP1-201ENST00000297661 DDTLA6NHG4 134 aaPredicted RBP16.95■□□□□ 0.3
UBAP1-201ENST00000297661 RAD17O75943 681 aa16.95■□□□□ 0.3
UBAP1-201ENST00000297661 SERPING1P05155 500 aa16.95■□□□□ 0.3
UBAP1-201ENST00000297661 HLA-DOAP06340 250 aa16.95■□□□□ 0.3
UBAP1-201ENST00000297661 HSPA9P38646 679 aaKnown RBP16.95■□□□□ 0.3
UBAP1-201ENST00000297661 ELF3P78545 371 aaPredicted RBP16.95■□□□□ 0.3
UBAP1-201ENST00000297661 SEPT2Q15019 361 aa16.95■□□□□ 0.3
UBAP1-201ENST00000297661 DCAF17Q5H9S7 520 aaPredicted RBP16.95■□□□□ 0.3
UBAP1-201ENST00000297661 GPATCH4Q5T3I0 446 aaKnown RBP16.95■□□□□ 0.3
UBAP1-201ENST00000297661 IQCDQ96DY2 449 aa16.95■□□□□ 0.3
UBAP1-201ENST00000297661 HOOK2Q96ED9 719 aa16.95■□□□□ 0.3
UBAP1-201ENST00000297661 ABCB11O95342 1321 aa16.95■□□□□ 0.3
UBAP1-201ENST00000297661 C5orf60A6NFR6 353 aa16.94■□□□□ 0.3
UBAP1-201ENST00000297661 SFI1A8K8P3 1242 aa16.94■□□□□ 0.3
UBAP1-201ENST00000297661 PJA2O43164 708 aa16.94■□□□□ 0.3
UBAP1-201ENST00000297661 DNAJC8O75937 253 aaPredicted RBP16.94■□□□□ 0.3
UBAP1-201ENST00000297661 MYBP10242 640 aa16.94■□□□□ 0.3
UBAP1-201ENST00000297661 GCKP35557 465 aa16.94■□□□□ 0.3
UBAP1-201ENST00000297661 KCNA1Q09470 495 aa16.94■□□□□ 0.3
UBAP1-201ENST00000297661 SLFN13Q68D06 897 aa16.94■□□□□ 0.3
UBAP1-201ENST00000297661 PPP1R18Q6NYC8 613 aa16.94■□□□□ 0.3
UBAP1-201ENST00000297661 SFR1Q86XK3 245 aa16.94■□□□□ 0.3
UBAP1-201ENST00000297661 COA1Q9GZY4 146 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms