RNA–Protein interactions for RNA: ENST00000296946.6

T-201, Transcript of Brachyury protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene T, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
T-201ENST00000296946 PPP2R3BQ9Y5P8 575 aa19.72■□□□□ 0.75
T-201ENST00000296946 C5orf60A6NFR6 353 aa19.72■□□□□ 0.75
T-201ENST00000296946 RAD51CO43502 376 aa19.72■□□□□ 0.75
T-201ENST00000296946 CTNND1O60716 968 aaKnown RBP19.72■□□□□ 0.75
T-201ENST00000296946 USP2O75604 605 aaPredicted RBP19.72■□□□□ 0.75
T-201ENST00000296946 SERPING1P05155 500 aa19.72■□□□□ 0.75
T-201ENST00000296946 MYBP10242 640 aa19.72■□□□□ 0.75
T-201ENST00000296946 CTNNA1P35221 906 aaKnown RBP19.72■□□□□ 0.75
T-201ENST00000296946 HSD17B3P37058 310 aa19.72■□□□□ 0.75
T-201ENST00000296946 AGBL2Q5U5Z8 902 aa19.72■□□□□ 0.75
T-201ENST00000296946 DCAF15Q66K64 600 aa19.72■□□□□ 0.75
T-201ENST00000296946 MAP1SQ66K74 1059 aaPredicted RBP19.72■□□□□ 0.75
T-201ENST00000296946 USP38Q8NB14 1042 aa19.72■□□□□ 0.75
T-201ENST00000296946 SEC16BQ96JE7 1060 aa19.72■□□□□ 0.75
T-201ENST00000296946 INPP4AQ96PE3 977 aaPredicted RBP19.72■□□□□ 0.75
T-201ENST00000296946 TMX2Q9Y320 296 aa19.72■□□□□ 0.75
T-201ENST00000296946 PCDHGC5Q9Y5F6 944 aa19.72■□□□□ 0.75
T-201ENST00000296946 M0R2N6 131 aa19.71■□□□□ 0.75
T-201ENST00000296946 GKAP1Q5VSY0 366 aaPredicted RBP19.71■□□□□ 0.75
T-201ENST00000296946 A0A1B0GUA9 196 aa19.71■□□□□ 0.75
T-201ENST00000296946 PAEPP09466 180 aa19.71■□□□□ 0.75
T-201ENST00000296946 ERCC3P19447 782 aa19.71■□□□□ 0.75
T-201ENST00000296946 PPP2R2AP63151 447 aa19.71■□□□□ 0.75
T-201ENST00000296946 LRRC63Q05C16 580 aa19.71■□□□□ 0.75
T-201ENST00000296946 XRCC4Q13426 336 aa19.71■□□□□ 0.75
T-201ENST00000296946 SFMBT2Q5VUG0 894 aa19.71■□□□□ 0.75
T-201ENST00000296946 HGSNATQ68CP4 663 aa19.71■□□□□ 0.75
T-201ENST00000296946 DAGLBQ8NCG7 672 aa19.71■□□□□ 0.75
T-201ENST00000296946 KIAA0895Q8NCT3 520 aa19.71■□□□□ 0.75
T-201ENST00000296946 ZC3H15Q8WU90 426 aaKnown RBP19.71■□□□□ 0.75
T-201ENST00000296946 NMRK2Q9NPI5 230 aa19.71■□□□□ 0.75
T-201ENST00000296946 PCDHA6Q9UN73 950 aa19.71■□□□□ 0.75
T-201ENST00000296946 CLEC11AQ9Y240 323 aa19.71■□□□□ 0.75
T-201ENST00000296946 PCDHA8Q9Y5H6 950 aa19.71■□□□□ 0.75
T-201ENST00000296946 DNM1LO00429 736 aa19.7■□□□□ 0.74
T-201ENST00000296946 FTCDO95954 541 aa19.7■□□□□ 0.74
T-201ENST00000296946 GHRP10912 638 aa19.7■□□□□ 0.74
T-201ENST00000296946 INF2Q27J81 1249 aa19.7■□□□□ 0.74
T-201ENST00000296946 SUPT20HL1Q3ZLR7 823 aa19.7■□□□□ 0.74
T-201ENST00000296946 RASGRP4Q8TDF6 673 aa19.7■□□□□ 0.74
T-201ENST00000296946 PIGSQ96S52 555 aa19.7■□□□□ 0.74
T-201ENST00000296946 KDM4CQ9H3R0 1056 aa19.7■□□□□ 0.74
T-201ENST00000296946 TMEM59LQ9UK28 342 aa19.7■□□□□ 0.74
T-201ENST00000296946 H0YGN5 161 aa19.7■□□□□ 0.74
T-201ENST00000296946 TRAF5O00463 557 aa19.7■□□□□ 0.74
T-201ENST00000296946 GNAQP50148 359 aa19.7■□□□□ 0.74
T-201ENST00000296946 EHHADHQ08426 723 aa19.7■□□□□ 0.74
T-201ENST00000296946 ASPRV1Q53RT3 343 aa19.7■□□□□ 0.74
T-201ENST00000296946 GMCL1P1Q8NEA9 526 aa19.7■□□□□ 0.74
T-201ENST00000296946 LRRC15Q8TF66 581 aa19.7■□□□□ 0.74
T-201ENST00000296946 CDCA5Q96FF9 252 aa19.7■□□□□ 0.74
T-201ENST00000296946 SCLT1Q96NL6 688 aa19.7■□□□□ 0.74
T-201ENST00000296946 ATP6V0A4Q9HBG4 840 aa19.7■□□□□ 0.74
T-201ENST00000296946 ARHGEF10LQ9HCE6 1279 aa19.7■□□□□ 0.74
T-201ENST00000296946 SLC39A2Q9NP94 309 aa19.7■□□□□ 0.74
T-201ENST00000296946 CEP72Q9P209 647 aa19.7■□□□□ 0.74
T-201ENST00000296946 NFS1Q9Y697 457 aa19.7■□□□□ 0.74
T-201ENST00000296946 PVALEFA0A1B0GWK0 134 aa19.69■□□□□ 0.74
T-201ENST00000296946 NKRFO15226 690 aaKnown RBP eCLIP19.69■□□□□ 0.74
T-201ENST00000296946 SCTRP47872 440 aa19.69■□□□□ 0.74
T-201ENST00000296946 DNA2P51530 1060 aa19.69■□□□□ 0.74
T-201ENST00000296946 SNAP25P60880 206 aa19.69■□□□□ 0.74
T-201ENST00000296946 KLHL7Q8IXQ5 586 aa19.69■□□□□ 0.74
T-201ENST00000296946 ADGRF4Q8IZF3 695 aa19.69■□□□□ 0.74
T-201ENST00000296946 CALML4Q96GE6 196 aa19.69■□□□□ 0.74
T-201ENST00000296946 SPZ1Q9BXG8 430 aa19.69■□□□□ 0.74
T-201ENST00000296946 HAUS2Q9NVX0 235 aa19.69■□□□□ 0.74
T-201ENST00000296946 TPX2Q9ULW0 747 aaKnown RBP19.69■□□□□ 0.74
T-201ENST00000296946 PCNTO95613 3336 aa19.69■□□□□ 0.74
T-201ENST00000296946 DNAJC8O75937 253 aaPredicted RBP19.68■□□□□ 0.74
T-201ENST00000296946 OR52Z1P0C646 297 aa19.68■□□□□ 0.74
T-201ENST00000296946 SCP2P22307 547 aa19.68■□□□□ 0.74
T-201ENST00000296946 ZNF844Q08AG5 666 aa19.68■□□□□ 0.74
T-201ENST00000296946 SCYL3Q8IZE3 742 aa19.68■□□□□ 0.74
T-201ENST00000296946 GUF1Q8N442 669 aaKnown RBP19.68■□□□□ 0.74
T-201ENST00000296946 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.68■□□□□ 0.74
T-201ENST00000296946 PBKQ96KB5 322 aa19.68■□□□□ 0.74
T-201ENST00000296946 RIOX1Q9H6W3 641 aa19.68■□□□□ 0.74
T-201ENST00000296946 JMJD4Q9H9V9 463 aa19.68■□□□□ 0.74
T-201ENST00000296946 BCCIPQ9P287 314 aaKnown RBP eCLIP19.68■□□□□ 0.74
T-201ENST00000296946 WDR90Q96KV7 1748 aa19.68■□□□□ 0.74
T-201ENST00000296946 USP17L10C9JJH3 530 aa19.68■□□□□ 0.74
T-201ENST00000296946 SV2BQ7L1I2 683 aa19.68■□□□□ 0.74
T-201ENST00000296946 CPLX4Q7Z7G2 160 aa19.68■□□□□ 0.74
T-201ENST00000296946 CNKSR2Q8WXI2 1034 aa19.68■□□□□ 0.74
T-201ENST00000296946 TSG101Q99816 390 aa19.68■□□□□ 0.74
T-201ENST00000296946 TANGO6Q9C0B7 1094 aa19.68■□□□□ 0.74
T-201ENST00000296946 PTPRAP18433 802 aa19.67■□□□□ 0.74
T-201ENST00000296946 KLRC1P26715 233 aa19.67■□□□□ 0.74
T-201ENST00000296946 TRADDQ15628 312 aa19.67■□□□□ 0.74
T-201ENST00000296946 SLC18A3Q16572 532 aa19.67■□□□□ 0.74
T-201ENST00000296946 FAM83BQ5T0W9 1011 aa19.67■□□□□ 0.74
T-201ENST00000296946 UNC13DQ70J99 1090 aa19.67■□□□□ 0.74
T-201ENST00000296946 PNMA8AQ86V59 439 aaPredicted RBP19.67■□□□□ 0.74
T-201ENST00000296946 FMNL3Q8IVF7 1028 aa19.67■□□□□ 0.74
T-201ENST00000296946 TATDN2Q93075 761 aa19.67■□□□□ 0.74
T-201ENST00000296946 CNOT10Q9H9A5 744 aaKnown RBP19.67■□□□□ 0.74
T-201ENST00000296946 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.67■□□□□ 0.74
T-201ENST00000296946 SCN4AP35499 1836 aa19.67■□□□□ 0.74
T-201ENST00000296946 MGRN1O60291 552 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms