RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 NRDCO43847 1150 aa17.13■□□□□ 0.33
LSM6-201ENST00000296581 CALUO43852 315 aaPredicted RBP17.13■□□□□ 0.33
LSM6-201ENST00000296581 PPP1R37O75864 691 aa17.13■□□□□ 0.33
LSM6-201ENST00000296581 KCNJ6P48051 423 aa17.13■□□□□ 0.33
LSM6-201ENST00000296581 SLC20A2Q08357 652 aa17.13■□□□□ 0.33
LSM6-201ENST00000296581 RBL2Q08999 1139 aa17.13■□□□□ 0.33
LSM6-201ENST00000296581 GOLGA8FQ08AF8 430 aa17.13■□□□□ 0.33
LSM6-201ENST00000296581 GOLGA8DPQ0D2H9 430 aa17.13■□□□□ 0.33
LSM6-201ENST00000296581 TRIM14Q14142 442 aa17.13■□□□□ 0.33
LSM6-201ENST00000296581 ZNF792Q3KQV3 632 aa17.13■□□□□ 0.33
LSM6-201ENST00000296581 PPFIBP1Q86W92 1011 aa17.13■□□□□ 0.33
LSM6-201ENST00000296581 LARSQ9P2J5 1176 aaKnown RBP17.13■□□□□ 0.33
LSM6-201ENST00000296581 DDX41Q9UJV9 622 aaKnown RBP17.13■□□□□ 0.33
LSM6-201ENST00000296581 SORBS3O60504 671 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 GYPCP04921 128 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 PLS3P13797 630 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 PRKCEQ02156 737 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 ADAM9Q13443 819 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 FAM110CQ1W6H9 321 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 VWA3BQ502W6 1294 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 XKR3Q5GH77 459 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 METTL7BQ6UX53 244 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 EEPD1Q7L9B9 569 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 TMEM139Q8IV31 216 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 DRC1Q96MC2 740 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 SH2D3AQ9BRG2 576 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 GSTTP1A0A1W2PQM5 241 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 SPDYE4A6NLX3 237 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 CETN3O15182 167 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 TGFB1I1O43294 461 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 ARIH2O95376 493 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 ADKP55263 362 aaKnown RBP17.12■□□□□ 0.33
LSM6-201ENST00000296581 KCNA1Q09470 495 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 ALCAMQ13740 583 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 NFIL3Q16649 462 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 ZC2HC1CQ53FD0 456 aaPredicted RBP17.12■□□□□ 0.33
LSM6-201ENST00000296581 PANX2Q96RD6 677 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 ERGIC2Q96RQ1 377 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 ZNF302Q9NR11 478 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 KCND1Q9NSA2 647 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 PCDHB13Q9Y5F0 798 aa17.12■□□□□ 0.33
LSM6-201ENST00000296581 MFAP3LO75121 409 aa17.11■□□□□ 0.33
LSM6-201ENST00000296581 GGPS1O95749 300 aa17.11■□□□□ 0.33
LSM6-201ENST00000296581 CHRM1P11229 460 aaPredicted RBP17.11■□□□□ 0.33
LSM6-201ENST00000296581 NR2F2P24468 414 aa17.11■□□□□ 0.33
LSM6-201ENST00000296581 ADORA2AP29274 412 aa17.11■□□□□ 0.33
LSM6-201ENST00000296581 TBC1D8BQ0IIM8 1120 aa17.11■□□□□ 0.33
LSM6-201ENST00000296581 ZNF771Q7L3S4 317 aaPredicted RBP17.11■□□□□ 0.33
LSM6-201ENST00000296581 CEP170P1Q96L14 293 aa17.11■□□□□ 0.33
LSM6-201ENST00000296581 NDST4Q9H3R1 872 aa17.11■□□□□ 0.33
LSM6-201ENST00000296581 ST6GALNAC4Q9H4F1 302 aa17.11■□□□□ 0.33
LSM6-201ENST00000296581 ZCCHC17Q9NP64 241 aaKnown RBP17.11■□□□□ 0.33
LSM6-201ENST00000296581 PDLIM7Q9NR12 457 aa17.11■□□□□ 0.33
LSM6-201ENST00000296581 PASKQ96RG2 1323 aa17.11■□□□□ 0.33
LSM6-201ENST00000296581 ATP4AP20648 1035 aa17.1■□□□□ 0.33
LSM6-201ENST00000296581 ZNF157P51786 506 aaPredicted RBP17.1■□□□□ 0.33
LSM6-201ENST00000296581 CCDC40Q4G0X9 1142 aa17.1■□□□□ 0.33
LSM6-201ENST00000296581 CCDC62Q6P9F0 684 aa17.1■□□□□ 0.33
LSM6-201ENST00000296581 MAEAQ7L5Y9 396 aa17.1■□□□□ 0.33
LSM6-201ENST00000296581 SAPCD2Q86UD0 394 aa17.1■□□□□ 0.33
LSM6-201ENST00000296581 CCDC51Q96ER9 411 aa17.1■□□□□ 0.33
LSM6-201ENST00000296581 ADGRA2Q96PE1 1338 aa17.1■□□□□ 0.33
LSM6-201ENST00000296581 MANSC4A6NHS7 340 aaPredicted RBP17.1■□□□□ 0.33
LSM6-201ENST00000296581 PES1O00541 588 aaKnown RBP17.1■□□□□ 0.33
LSM6-201ENST00000296581 RPL13P26373 211 aaKnown RBP17.1■□□□□ 0.33
LSM6-201ENST00000296581 CASP14P31944 242 aa17.1■□□□□ 0.33
LSM6-201ENST00000296581 FXR1P51114 621 aaKnown RBP eCLIP17.1■□□□□ 0.33
LSM6-201ENST00000296581 LY6KQ17RY6 165 aa17.1■□□□□ 0.33
LSM6-201ENST00000296581 FKBP15Q5T1M5 1219 aa17.1■□□□□ 0.33
LSM6-201ENST00000296581 ZNF467Q7Z7K2 595 aaPredicted RBP17.1■□□□□ 0.33
LSM6-201ENST00000296581 CNGA4Q8IV77 575 aa17.1■□□□□ 0.33
LSM6-201ENST00000296581 TRIM59Q8IWR1 403 aa17.1■□□□□ 0.33
LSM6-201ENST00000296581 FBXO16Q8IX29 292 aaPredicted RBP17.1■□□□□ 0.33
LSM6-201ENST00000296581 AFAP1L1Q8TED9 768 aa17.1■□□□□ 0.33
LSM6-201ENST00000296581 PCYT2Q99447 389 aa17.1■□□□□ 0.33
LSM6-201ENST00000296581 CYP26B1Q9NR63 512 aa17.1■□□□□ 0.33
LSM6-201ENST00000296581 SEPT9Q9UHD8 586 aaPredicted RBP17.1■□□□□ 0.33
LSM6-201ENST00000296581 ZNF236Q9UL36 1845 aa17.1■□□□□ 0.33
LSM6-201ENST00000296581 DGAT1O75907 488 aa17.09■□□□□ 0.33
LSM6-201ENST00000296581 NR3C1P04150 777 aa17.09■□□□□ 0.33
LSM6-201ENST00000296581 TPM1P09493 284 aa17.09■□□□□ 0.33
LSM6-201ENST00000296581 CELF3Q5SZQ8 465 aaKnown RBP17.09■□□□□ 0.33
LSM6-201ENST00000296581 RGMBQ6NW40 437 aa17.09■□□□□ 0.33
LSM6-201ENST00000296581 ARMCX2Q7L311 632 aa17.09■□□□□ 0.33
LSM6-201ENST00000296581 TRMT1LQ7Z2T5 733 aaKnown RBP17.09■□□□□ 0.33
LSM6-201ENST00000296581 GPR142Q7Z601 462 aa17.09■□□□□ 0.33
LSM6-201ENST00000296581 SLC17A8Q8NDX2 589 aa17.09■□□□□ 0.33
LSM6-201ENST00000296581 SEPT1Q8WYJ6 367 aa17.09■□□□□ 0.33
LSM6-201ENST00000296581 BAG1Q99933 345 aaPredicted RBP17.09■□□□□ 0.33
LSM6-201ENST00000296581 GPRC5CQ9NQ84 441 aa17.09■□□□□ 0.33
LSM6-201ENST00000296581 IVNS1ABPQ9Y6Y0 642 aa17.09■□□□□ 0.33
LSM6-201ENST00000296581 K7ENM7 598 aa17.09■□□□□ 0.33
LSM6-201ENST00000296581 STX10O60499 249 aa17.09■□□□□ 0.33
LSM6-201ENST00000296581 OATP04181 439 aa17.09■□□□□ 0.33
LSM6-201ENST00000296581 NCKAP1LP55160 1127 aa17.09■□□□□ 0.33
LSM6-201ENST00000296581 GRB14Q14449 540 aa17.09■□□□□ 0.33
LSM6-201ENST00000296581 SYCP1Q15431 976 aa17.09■□□□□ 0.33
LSM6-201ENST00000296581 MCPH1Q8NEM0 835 aa17.09■□□□□ 0.33
LSM6-201ENST00000296581 KIFAP3Q92845 792 aa17.09■□□□□ 0.33
LSM6-201ENST00000296581 MLXIPQ9HAP2 919 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms