RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 ANO7Q6IWH7 933 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 GGT6Q6P531 493 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 OTUD5Q96G74 571 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 B3GALT6Q96L58 329 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 NLRP3Q96P20 1036 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 GOLPH3LQ9H4A5 285 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 FAM207AQ9NSI2 230 aaPredicted RBP12.55□□□□□ -0.4
SNIP1-201ENST00000296215 HDAC9Q9UKV0 1011 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 O00370 1275 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 SLC27A2O14975 620 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 PFDN6O15212 129 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 LARGE1O95461 756 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 BAG3O95817 575 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 ENDOUP21128 410 aaKnown RBP12.55□□□□□ -0.4
SNIP1-201ENST00000296215 ITGADQ13349 1161 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 ADAT2Q7Z6V5 191 aaKnown RBP12.55□□□□□ -0.4
SNIP1-201ENST00000296215 MTBPQ96DY7 904 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 USP40Q9NVE5 1235 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 MRPL39Q9NYK5 338 aaKnown RBP12.55□□□□□ -0.4
SNIP1-201ENST00000296215 DNALI1O14645 258 aaPredicted RBP12.55□□□□□ -0.4
SNIP1-201ENST00000296215 PPIP5K2O43314 1243 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 IDH3BO43837 385 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 PGM3O95394 542 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 FTCDO95954 541 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 PABPC4Q13310 644 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNIP1-201ENST00000296215 IYDQ6PHW0 289 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 BRSK2Q8IWQ3 736 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 HDAC2Q92769 488 aaKnown RBP12.55□□□□□ -0.4
SNIP1-201ENST00000296215 KIFC2Q96AC6 838 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 RMDN1Q96DB5 314 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 CITED4Q96RK1 184 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 NAP1L4Q99733 375 aaKnown RBP12.55□□□□□ -0.4
SNIP1-201ENST00000296215 UQCC2Q9BRT2 126 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 SNX12Q9UMY4 172 aa12.55□□□□□ -0.4
SNIP1-201ENST00000296215 CFAP99D6REC4 459 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 BMP15O95972 392 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 PORP16435 677 aaPredicted RBP12.54□□□□□ -0.4
SNIP1-201ENST00000296215 HPCAP84074 193 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 SGO2Q562F6 1265 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 DSTYKQ6XUX3 929 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 LRRC49Q8IUZ0 686 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 PASD1Q8IV76 773 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 SYT15Q9BQS2 421 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 SLC26A6Q9BXS9 759 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 CCDC8Q9H0W5 538 aaPredicted RBP12.54□□□□□ -0.4
SNIP1-201ENST00000296215 CAPN11Q9UMQ6 739 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 PPME1Q9Y570 386 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 KIF21AQ7Z4S6 1674 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 TIMM44O43615 452 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 DLGAP3O95886 979 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 AGTP01019 485 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 RPL5P46777 297 aaKnown RBP12.54□□□□□ -0.4
SNIP1-201ENST00000296215 AMPD3Q01432 767 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 MORC3Q14149 939 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 GPR141Q7Z602 305 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 CCDC125Q86Z20 511 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 CATSPER1Q8NEC5 780 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 SEPT1Q8WYJ6 367 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 MKL1Q969V6 931 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 LTV1Q96GA3 475 aaPredicted RBP12.54□□□□□ -0.4
SNIP1-201ENST00000296215 PLIN2Q99541 437 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 NHEJ1Q9H9Q4 299 aaPredicted RBP12.54□□□□□ -0.4
SNIP1-201ENST00000296215 NCOA5Q9HCD5 579 aaKnown RBP12.54□□□□□ -0.4
SNIP1-201ENST00000296215 GNPATO15228 680 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 CSE1LP55060 971 aaKnown RBP12.54□□□□□ -0.4
SNIP1-201ENST00000296215 LLGL2Q6P1M3 1020 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 UBE3BQ7Z3V4 1068 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 MICU3Q86XE3 530 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 STX12Q86Y82 276 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 SLC12A5Q9H2X9 1139 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 TBCCD1Q9NVR7 557 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 DMGDHQ9UI17 866 aaKnown RBP12.54□□□□□ -0.4
SNIP1-201ENST00000296215 STRIP2Q9ULQ0 834 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 EFR3BQ9Y2G0 817 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 AP4S1Q9Y587 144 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 TRIM64A6NGJ6 449 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 TRIM64BA6NI03 449 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.54□□□□□ -0.4
SNIP1-201ENST00000296215 STMND1H3BQB6 276 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 EPN2O95208 641 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 KRT16P08779 473 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 GSTT2P0CG29 244 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 GSTT2BP0CG30 244 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 HOXD11P31277 338 aaPredicted RBP12.54□□□□□ -0.4
SNIP1-201ENST00000296215 NSUN2Q08J23 767 aaKnown RBP eCLIP12.54□□□□□ -0.4
SNIP1-201ENST00000296215 FAPQ12884 760 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 ACAP1Q15027 740 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 CATIPQ7Z7H3 387 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 ACMSDQ8TDX5 336 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 DNAJC1Q96KC8 554 aaKnown RBP12.54□□□□□ -0.4
SNIP1-201ENST00000296215 GSDMAQ96QA5 445 aa12.54□□□□□ -0.4
SNIP1-201ENST00000296215 CAMSAP2Q08AD1 1489 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 CA4P22748 312 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 ZNF268Q14587 947 aaPredicted RBP12.53□□□□□ -0.4
SNIP1-201ENST00000296215 CDR2LQ86X02 465 aaPredicted RBP12.53□□□□□ -0.4
SNIP1-201ENST00000296215 SPOCK3Q9BQ16 436 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 AP1M1Q9BXS5 423 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 MRPL9Q9BYD2 267 aaKnown RBP12.53□□□□□ -0.4
SNIP1-201ENST00000296215 GRIP2Q9C0E4 1043 aa12.53□□□□□ -0.4
SNIP1-201ENST00000296215 PCDH12Q9NPG4 1184 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms