RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 HDAC7Q8WUI4 952 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 YIPF3Q9GZM5 350 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 PRDM5Q9NQX1 630 aaPredicted RBP14.48□□□□□ -0.09
HPS3-201ENST00000296051 CAPN6Q9Y6Q1 641 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 STK25O00506 426 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 TLR3O15455 904 aaKnown RBP14.48□□□□□ -0.09
HPS3-201ENST00000296051 CELF2O95319 508 aaKnown RBP14.48□□□□□ -0.09
HPS3-201ENST00000296051 ERFP50548 548 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 CCDC62Q6P9F0 684 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 DGKHQ86XP1 1220 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 EXOC8Q8IYI6 725 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 SCYL3Q8IZE3 742 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 CEP95Q96GE4 821 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 C1orf112Q9NSG2 853 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 INTUQ9ULD6 942 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 ADGRB1O14514 1584 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 RFX7Q2KHR2 1363 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 CLTCQ00610 1675 aaKnown RBP14.48□□□□□ -0.09
HPS3-201ENST00000296051 STAT3P40763 770 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 PPP2R2AP63151 447 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 C9orf131Q5VYM1 1079 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 TMEM47Q9BQJ4 181 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 ADAM33Q9BZ11 813 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 TECPR2O15040 1411 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 NCAPD2Q15021 1401 aa14.48□□□□□ -0.09
HPS3-201ENST00000296051 XPOTO43592 962 aaKnown RBP14.47□□□□□ -0.09
HPS3-201ENST00000296051 BMP6P22004 513 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 MDH1P40925 334 aaKnown RBP14.47□□□□□ -0.09
HPS3-201ENST00000296051 TFAMQ00059 246 aaKnown RBP14.47□□□□□ -0.09
HPS3-201ENST00000296051 AP1ARQ63HQ0 302 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 TAF1DQ9H5J8 278 aaPredicted RBP14.47□□□□□ -0.09
HPS3-201ENST00000296051 SLITRK6Q9H5Y7 841 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 WDR19Q8NEZ3 1342 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 A0A1W2PQC6 194 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 ZSCAN5CA6NGD5 496 aaPredicted RBP14.47□□□□□ -0.09
HPS3-201ENST00000296051 LAD1O00515 517 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 STXBP2Q15833 593 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 STRIP1Q5VSL9 837 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 FAM186BQ8IYM0 893 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 IL17RAQ96F46 866 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 PBKQ96KB5 322 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 RILPQ96NA2 401 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 MTFR1LQ9H019 292 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 TMEM60Q9H2L4 133 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 MAGEF1Q9HAY2 307 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 KMT5AQ9NQR1 393 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 INTS13Q9NVM9 706 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 USP31Q70CQ4 1352 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 USP17L15C9J2P7 530 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 USP17L13C9JLJ4 530 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 USP17L11C9JVI0 530 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 USP17L18D6R9N7 530 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 USP17L22D6RA61 530 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 USP17L17D6RBQ6 530 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 USP17L19D6RCP7 530 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 USP17L20D6RJB6 530 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 SART1O43290 800 aaKnown RBP14.47□□□□□ -0.09
HPS3-201ENST00000296051 PLA2G4BP0C869 781 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 YWHAEP62258 255 aaKnown RBP14.47□□□□□ -0.09
HPS3-201ENST00000296051 USP17L24Q0WX57 530 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 KCNH2Q12809 1159 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 USP17L6PQ6QN14 398 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 CATSPER4Q7RTX7 472 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 PARP9Q8IXQ6 854 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 C7orf31Q8N865 590 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 FAM149B1Q96BN6 582 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 TRIM9Q9C026 710 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 SPATS2LQ9NUQ6 558 aaKnown RBP14.47□□□□□ -0.09
HPS3-201ENST00000296051 INPP5FQ9Y2H2 1132 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 PSMD14O00487 310 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 STAMBPO95630 424 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 RASIP1Q5U651 963 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 PRPF38AQ8NAV1 312 aaKnown RBP14.47□□□□□ -0.09
HPS3-201ENST00000296051 ZNF148Q9UQR1 794 aa14.47□□□□□ -0.09
HPS3-201ENST00000296051 MAP2P11137 1827 aaKnown RBP14.46□□□□□ -0.09
HPS3-201ENST00000296051 UTYO14607 1347 aa14.46□□□□□ -0.09
HPS3-201ENST00000296051 PASKQ96RG2 1323 aa14.46□□□□□ -0.09
HPS3-201ENST00000296051 PNMA6FA0A0J9YX94 578 aa14.46□□□□□ -0.09
HPS3-201ENST00000296051 TMED2Q15363 201 aa14.46□□□□□ -0.09
HPS3-201ENST00000296051 GLE1Q53GS7 698 aaKnown RBP14.46□□□□□ -0.09
HPS3-201ENST00000296051 ZBTB33Q86T24 672 aa14.46□□□□□ -0.09
HPS3-201ENST00000296051 VCXQ9H320 206 aa14.46□□□□□ -0.09
HPS3-201ENST00000296051 MYL1P05976 194 aa14.46□□□□□ -0.09
HPS3-201ENST00000296051 SRGNP10124 158 aa14.46□□□□□ -0.09
HPS3-201ENST00000296051 LRRC63Q05C16 580 aa14.46□□□□□ -0.09
HPS3-201ENST00000296051 BSPRYQ5W0U4 402 aa14.46□□□□□ -0.09
HPS3-201ENST00000296051 FASTKD5Q7L8L6 764 aaKnown RBP14.46□□□□□ -0.09
HPS3-201ENST00000296051 DNAAF5Q86Y56 855 aa14.46□□□□□ -0.09
HPS3-201ENST00000296051 ZNF668Q96K58 619 aaPredicted RBP14.46□□□□□ -0.09
HPS3-201ENST00000296051 EPN3Q9H201 632 aa14.46□□□□□ -0.09
HPS3-201ENST00000296051 CIB2O75838 187 aa14.46□□□□□ -0.1
HPS3-201ENST00000296051 PDHA1P08559 390 aa14.46□□□□□ -0.1
HPS3-201ENST00000296051 METTL14Q9HCE5 456 aaKnown RBP14.46□□□□□ -0.1
HPS3-201ENST00000296051 BZW2Q9Y6E2 419 aaKnown RBP14.46□□□□□ -0.1
HPS3-201ENST00000296051 TDP2O95551 362 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 ATP2A2P16615 1042 aaKnown RBP14.45□□□□□ -0.1
HPS3-201ENST00000296051 ZNF18P17022 549 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 POLE2P56282 527 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 CUL1Q13616 776 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 HP1BP3Q5SSJ5 553 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms