RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 ZNF449Q6P9G9 518 aa19.09■□□□□ 0.65
CDC42EP3-201ENST00000295324 A0A087WWV3 80 aa19.09■□□□□ 0.65
CDC42EP3-201ENST00000295324 SGK1O00141 431 aa19.09■□□□□ 0.65
CDC42EP3-201ENST00000295324 SEMA3FQ13275 785 aa19.09■□□□□ 0.65
CDC42EP3-201ENST00000295324 PDIA5Q14554 519 aa19.09■□□□□ 0.65
CDC42EP3-201ENST00000295324 TMEM35BQ8NCS4 154 aa19.09■□□□□ 0.65
CDC42EP3-201ENST00000295324 NUDT12Q9BQG2 462 aa19.09■□□□□ 0.65
CDC42EP3-201ENST00000295324 CCDC160A6NGH7 325 aa19.08■□□□□ 0.65
CDC42EP3-201ENST00000295324 C1orf228Q6PIY5 440 aa19.08■□□□□ 0.65
CDC42EP3-201ENST00000295324 TIPINQ9BVW5 301 aa19.08■□□□□ 0.65
CDC42EP3-201ENST00000295324 MEGF6O75095 1541 aa19.08■□□□□ 0.65
CDC42EP3-201ENST00000295324 CTNNA1P35221 906 aaKnown RBP19.08■□□□□ 0.65
CDC42EP3-201ENST00000295324 GTF2A2P52657 109 aa19.08■□□□□ 0.65
CDC42EP3-201ENST00000295324 NAA35Q5VZE5 725 aa19.08■□□□□ 0.65
CDC42EP3-201ENST00000295324 NFKBIAP25963 317 aa19.08■□□□□ 0.64
CDC42EP3-201ENST00000295324 GARSP41250 739 aaKnown RBP19.08■□□□□ 0.64
CDC42EP3-201ENST00000295324 MICALL1Q8N3F8 863 aa19.08■□□□□ 0.64
CDC42EP3-201ENST00000295324 KCTD6Q8NC69 237 aa19.08■□□□□ 0.64
CDC42EP3-201ENST00000295324 EYA4O95677 639 aa19.08■□□□□ 0.64
CDC42EP3-201ENST00000295324 STOX1Q6ZVD7 989 aa19.08■□□□□ 0.64
CDC42EP3-201ENST00000295324 TTC1Q99614 292 aa19.08■□□□□ 0.64
CDC42EP3-201ENST00000295324 HSPA6P17066 643 aa19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 CEP57Q86XR8 500 aa19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 SCN4BQ8IWT1 228 aa19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 ZNF609O15014 1411 aa19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 EIF4A3P38919 411 aaKnown RBP19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 CLEC10AQ8IUN9 316 aa19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 TAB3Q8N5C8 712 aaPredicted RBP19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 SKA2Q8WVK7 121 aaPredicted RBP19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 POLLQ9UGP5 575 aa19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 PDHBP11177 359 aa19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 ATP2C1P98194 919 aaPredicted RBP19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 CYFIP1Q7L576 1253 aa19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 DGAT1O75907 488 aa19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 GUCY2FP51841 1108 aa19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 KRT31Q15323 416 aa19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 DNAJC12Q9UKB3 198 aa19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 KIAA1210Q9ULL0 1709 aa19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 PDS5AQ29RF7 1337 aaKnown RBP19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 TBX3O15119 743 aa19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 TBXAS1P24557 533 aaPredicted RBP19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 GCLMP48507 274 aa19.07■□□□□ 0.64
CDC42EP3-201ENST00000295324 RGL2O15211 777 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 EPHX2P34913 555 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 GOLGA8FQ08AF8 430 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 GOLGA8DPQ0D2H9 430 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 IGDCC4Q8TDY8 1250 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 LMCD1Q9NZU5 365 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 LRRD1A4D1F6 860 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 MAFGO15525 162 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 AP3M2P53677 418 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 TPD52P55327 224 aaPredicted RBP19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 XRRA1Q6P2D8 792 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 BZW1Q7L1Q6 419 aaKnown RBP19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 SCFD2Q8WU76 684 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 CACYBPQ9HB71 228 aaKnown RBP19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 MAGEB2O15479 319 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 CIB2O75838 187 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 ACTN1P12814 892 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 YWHABP31946 246 aaKnown RBP19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 YWHAGP61981 247 aaKnown RBP eCLIP19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 BRD3Q15059 726 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 RNF149Q8NC42 400 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 MKRN1Q9UHC7 482 aaKnown RBP19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 DPYSL4O14531 572 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 SMARCA1P28370 1054 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 SGO2Q562F6 1265 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 NAALADL2Q58DX5 795 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 SDCCAG8Q86SQ7 713 aaPredicted RBP19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 PPP4R1Q8TF05 950 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 MAP3K14Q99558 947 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 HOMER3Q9NSC5 361 aa19.06■□□□□ 0.64
CDC42EP3-201ENST00000295324 ZNF18P17022 549 aa19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 HAUS6Q7Z4H7 955 aa19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 JRKLQ9Y4A0 524 aa19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 VEGFAP15692 232 aaPredicted RBP19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 ZNF394Q53GI3 561 aa19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 ALKBH5Q6P6C2 394 aaKnown RBP19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 TOGARAM2Q6ZUX3 1019 aa19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 ZDHHC15Q96MV8 337 aa19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 HEXIM1O94992 359 aaKnown RBP19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 ERO1BQ86YB8 467 aa19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 RHOT2Q8IXI1 618 aa19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 ZNF668Q96K58 619 aaPredicted RBP19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 ZNF560Q96MR9 790 aa19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 NGRNQ9NPE2 291 aaKnown RBP19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 RARBP10826 455 aa19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 KCNJ6P48051 423 aa19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 VSTM4Q8IW00 320 aa19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 GUF1Q8N442 669 aaKnown RBP19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 NDUFAB1O14561 156 aa19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 KIAA0391O15091 583 aaKnown RBP19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 VAMP7P51809 220 aa19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 MXD4Q14582 209 aaPredicted RBP19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 ARHGEF18Q6ZSZ5 1173 aa19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 DNAAF3Q8N9W5 541 aa19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 PRMT6Q96LA8 375 aaPredicted RBP19.05■□□□□ 0.64
CDC42EP3-201ENST00000295324 LBHD1Q9BQE6 289 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms