RNA–Protein interactions for RNA: ENST00000289893.8

MACF1-201, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5 BASIC

Gene MACF1, Length 19,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-201ENST00000289893 OCM2P0CE71 109 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 OCMP0CE72 109 aaPredicted RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 CACNB1Q02641 598 aaPredicted RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 MYO1EQ12965 1108 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 TDRD7Q8NHU6 1098 aaKnown RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 ZFYVE19Q96K21 471 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 SNX25Q9H3E2 840 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 KIAA1024Q9UPX6 916 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 NRKQ7Z2Y5 1582 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 ZSCAN9O15535 394 aaPredicted RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 HSPA6P17066 643 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 NR2F2P24468 414 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 GYS2P54840 703 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 EFHD2Q96C19 240 aaPredicted RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 FAM161BQ96MY7 647 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 NRDE2Q9H7Z3 1164 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 TMEM51Q9NW97 253 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 URB1O60287 2271 aaKnown RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 BTBD18B2RXH4 712 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 MAPK13O15264 365 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 CIAO1O76071 339 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 HSPA8P11142 646 aaKnown RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 NNTQ13423 1086 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 KRR1Q13601 381 aaKnown RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 LRRC41Q15345 812 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 NAF1Q96HR8 494 aaKnown RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 AP1M1Q9BXS5 423 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 PCIF1Q9H4Z3 704 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 UNC13BO14795 1591 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 ACSL3O95573 720 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 MRPS25P82663 173 aaKnown RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 TSPY1Q01534 308 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 DR1Q01658 176 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 ADCY2Q08462 1091 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 HIF1AQ16665 826 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 EAPPQ56P03 285 aaPredicted RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 SPATA1Q5VX52 437 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 FBXO11Q86XK2 927 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 ZBTB18Q99592 522 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 ARHGEF28Q8N1W1 1705 aaKnown RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 KIAA1210Q9ULL0 1709 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 GOLGA8MH3BSY2 632 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 RASGRF2O14827 1237 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 SEC24DO94855 1032 aaPredicted RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 ZSCAN20P17040 1043 aaPredicted RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 PPARAQ07869 468 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 PABPC4Q13310 644 aaKnown RBP eCLIP3.79□□□□□ -1.84e-12■■□□□ 12
MACF1-201ENST00000289893 MAN2A1Q16706 1144 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 STRIP2Q9ULQ0 834 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 TPCN1Q9ULQ1 816 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 MADDQ8WXG6 1647 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 RASA4BC9J798 803 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 RASA4O43374 803 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 CARSP49589 748 aaKnown RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 TUBA1BP68363 451 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 TFAMQ00059 246 aaKnown RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 TUBA1AQ71U36 451 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 ANKRD36BP1Q96IX9 119 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 BTBD6Q96KE9 485 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 BEGAINQ9BUH8 593 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 GOLGA8IPA6NC78 632 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 TMEM191CA6NGB0 347 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 S100A9P06702 114 aaKnown RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 KCNA2P16389 499 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 VCPP55072 806 aaKnown RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 TAF1BQ53T94 588 aaPredicted RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 FAM133AQ8N9E0 248 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 LPIN2Q92539 896 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 OTULINQ96BN8 352 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 MMTAG2Q9BU76 263 aaKnown RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 FAM129AQ9BZQ8 928 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 NXF1Q9UBU9 619 aaKnown RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 MROH5Q6ZUA9 1318 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 F5H423 210 aaPredicted RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 ICA1Q05084 483 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 TCIRG1Q13488 830 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 TRAF7Q6Q0C0 670 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 CCNL1Q9UK58 526 aaPredicted RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 CPSF3Q9UKF6 684 aaKnown RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 OSTNP61366 133 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 MFSD14BQ5SR56 506 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 PDXDC1Q6P996 788 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 CLEC17AQ6ZS10 378 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 PRPF38AQ8NAV1 312 aaKnown RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 SLC52A2Q9HAB3 445 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 ATP8B3O60423 1300 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 USP17L12C9JPN9 530 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 USP17L21D6R901 530 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 PMLP29590 882 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 RCSD1Q6JBY9 416 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 GRAMD1CQ8IYS0 662 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 SUPT20HQ8NEM7 779 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 GPT2Q8TD30 523 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 PDCD6IPQ8WUM4 868 aaKnown RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 GSDMAQ96QA5 445 aa3.79□□□□□ -1.8
MACF1-201ENST00000289893 PAPOLBQ9NRJ5 636 aaKnown RBP3.79□□□□□ -1.8
MACF1-201ENST00000289893 UBAP1LF5GYI3 381 aa3.78□□□□□ -1.8
MACF1-201ENST00000289893 PTGDRQ13258 359 aa3.78□□□□□ -1.8
MACF1-201ENST00000289893 TRAPPC3LQ5T215 181 aa3.78□□□□□ -1.8
MACF1-201ENST00000289893 GSPT2Q8IYD1 628 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms