RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 TRIM59Q8IWR1 403 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 LXNQ9BS40 222 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 MLXIPLQ9NP71 852 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 NAGPAQ9UK23 515 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 DAAM1Q9Y4D1 1078 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 SLC16A4O15374 487 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 RUFY4Q6ZNE9 571 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 PODNQ7Z5L7 613 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 METTL13Q8N6R0 699 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 UBL4BQ8N7F7 174 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 NACC1Q96RE7 527 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 MRPL11Q9Y3B7 192 aaKnown RBP17.25■□□□□ 0.35
SMAD6-201ENST00000288840 MYH10P35580 1976 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 TMEM150BA6NC51 233 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 TNNI1P19237 187 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 AP3B2Q13367 1082 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 B4GALNT4Q76KP1 1039 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 MMGT1Q8N4V1 131 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 DCAF4Q8WV16 495 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 GLG1Q92896 1179 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 MASTLQ96GX5 879 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 ZNF142P52746 1687 aaPredicted RBP17.25■□□□□ 0.35
SMAD6-201ENST00000288840 TISP43B9A030 160 aa17.24■□□□□ 0.35
SMAD6-201ENST00000288840 IPO5O00410 1097 aaKnown RBP17.24■□□□□ 0.35
SMAD6-201ENST00000288840 TLR2O60603 784 aa17.24■□□□□ 0.35
SMAD6-201ENST00000288840 FIGNQ5HY92 759 aa17.24■□□□□ 0.35
SMAD6-201ENST00000288840 LMBRD2Q68DH5 695 aaPredicted RBP17.24■□□□□ 0.35
SMAD6-201ENST00000288840 CRAMP1Q96RY5 1269 aa17.24■□□□□ 0.35
SMAD6-201ENST00000288840 TTYH3Q9C0H2 523 aa17.24■□□□□ 0.35
SMAD6-201ENST00000288840 MTRF1LQ9UGC7 380 aaKnown RBP17.24■□□□□ 0.35
SMAD6-201ENST00000288840 GRID2IPA4D2P6 1211 aa17.24■□□□□ 0.35
SMAD6-201ENST00000288840 RPA1P27694 616 aa17.24■□□□□ 0.35
SMAD6-201ENST00000288840 EPC2Q52LR7 807 aa17.24■□□□□ 0.35
SMAD6-201ENST00000288840 ALS2CLQ60I27 953 aa17.24■□□□□ 0.35
SMAD6-201ENST00000288840 C2CD6Q53TS8 623 aa17.24■□□□□ 0.35
SMAD6-201ENST00000288840 DENND2CQ68D51 928 aa17.24■□□□□ 0.35
SMAD6-201ENST00000288840 ZNF341Q9BYN7 854 aa17.24■□□□□ 0.35
SMAD6-201ENST00000288840 RAVER2Q9HCJ3 691 aaKnown RBP17.24■□□□□ 0.35
SMAD6-201ENST00000288840 EMSYQ7Z589 1322 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 CTNNA2P26232 953 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 PADI6Q6TGC4 694 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 SLC35G2Q8TBE7 412 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 POMGNT1Q8WZA1 660 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 FAM20AQ96MK3 541 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 FNBP1Q96RU3 617 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 MTUS1Q9ULD2 1270 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 FTLP02792 175 aaPredicted RBP17.23■□□□□ 0.35
SMAD6-201ENST00000288840 MAGOHP61326 146 aaKnown RBP17.23■□□□□ 0.35
SMAD6-201ENST00000288840 TRAF1Q13077 416 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 FBXW10Q5XX13 1052 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 RINT1Q6NUQ1 792 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 PPP1R18Q6NYC8 613 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 PPP4R3CPQ6ZMV5 832 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 RNPC3Q96LT9 517 aaKnown RBP17.23■□□□□ 0.35
SMAD6-201ENST00000288840 VIPAS39Q9H9C1 493 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 ZNF277Q9NRM2 450 aaPredicted RBP17.23■□□□□ 0.35
SMAD6-201ENST00000288840 HIP1RO75146 1068 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 LMNB1P20700 586 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 ZNF653Q96CK0 615 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 KIFC3Q9BVG8 833 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 TAF1DQ9H5J8 278 aaPredicted RBP17.23■□□□□ 0.35
SMAD6-201ENST00000288840 ACP6Q9NPH0 428 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 COL18A1P39060 1754 aa17.23■□□□□ 0.35
SMAD6-201ENST00000288840 RGS16O15492 202 aaPredicted RBP17.22■□□□□ 0.35
SMAD6-201ENST00000288840 SMTNP53814 917 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 TMEM119Q4V9L6 283 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 CCDC38Q502W7 563 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 SLC30A5Q8TAD4 765 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 FMO2Q99518 471 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 ARP10275 920 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 ADRA2BP18089 450 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 SEPT7Q16181 437 aaKnown RBP17.22■□□□□ 0.35
SMAD6-201ENST00000288840 USP38Q8NB14 1042 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 AGBL1Q96MI9 1066 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 RNF14Q9UBS8 474 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 TBK1Q9UHD2 729 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 CD2APQ9Y5K6 639 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 NUP98P52948 1817 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 PDXKO00764 312 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 KCNJ1P48048 391 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 MXI1P50539 228 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 DR1Q01658 176 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 ORC2Q13416 577 aaPredicted RBP17.22■□□□□ 0.35
SMAD6-201ENST00000288840 FRMD5Q7Z6J6 570 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 BTBD6Q96KE9 485 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 FAM118BQ9BPY3 351 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 INTS2Q9H0H0 1204 aaKnown RBP17.22■□□□□ 0.35
SMAD6-201ENST00000288840 GPRC5CQ9NQ84 441 aa17.22■□□□□ 0.35
SMAD6-201ENST00000288840 EYA4O95677 639 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 ARSHQ5FYA8 562 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 KAZNQ674X7 775 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 SYT2Q8N9I0 419 aaPredicted RBP17.21■□□□□ 0.35
SMAD6-201ENST00000288840 PBKQ96KB5 322 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 FAM84AQ96KN4 292 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 ADAM33Q9BZ11 813 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 TMEM39BQ9GZU3 492 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 PLCB1Q9NQ66 1216 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 TJP1Q07157 1748 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 DISP2A7MBM2 1401 aa17.21■□□□□ 0.35
SMAD6-201ENST00000288840 HNRNPDLO14979 420 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms