RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 MTMR7Q9Y216 660 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 DAGLAQ9Y4D2 1042 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 PGRMC1O00264 195 aaKnown RBP11.29□□□□□ -0.6
SKA1-201ENST00000285116 RTN2O75298 545 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 UCHL3P15374 230 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 PAX7P23759 505 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 HOXA10P31260 410 aaPredicted RBP11.29□□□□□ -0.6
SKA1-201ENST00000285116 PTK2Q05397 1052 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 EPHA7Q15375 998 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 CLUL1Q15846 466 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 KNOP1Q1ED39 458 aaKnown RBP11.29□□□□□ -0.6
SKA1-201ENST00000285116 ZNF571Q7Z3V5 609 aaPredicted RBP11.29□□□□□ -0.6
SKA1-201ENST00000285116 SYT2Q8N9I0 419 aaPredicted RBP11.29□□□□□ -0.6
SKA1-201ENST00000285116 ETNPPLQ8TBG4 499 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 KDM4CQ9H3R0 1056 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 PSTPIP2Q9H939 334 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 HDAC9Q9UKV0 1011 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 ZNF646O15015 1829 aaPredicted RBP11.29□□□□□ -0.6
SKA1-201ENST00000285116 CALUO43852 315 aaPredicted RBP11.29□□□□□ -0.6
SKA1-201ENST00000285116 BBOX1O75936 387 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 FLOT1O75955 427 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 GYS1P13807 737 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 AKR1B1P15121 316 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 IBSPP21815 317 aaPredicted RBP11.29□□□□□ -0.6
SKA1-201ENST00000285116 PON1P27169 355 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 ERVK-9P63128 1117 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 IRX1P78414 480 aaPredicted RBP11.29□□□□□ -0.6
SKA1-201ENST00000285116 SLC15A2Q16348 729 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 PPP2R5EQ16537 467 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 SPRED3Q2MJR0 410 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 GKAP1Q5VSY0 366 aaPredicted RBP11.29□□□□□ -0.6
SKA1-201ENST00000285116 FAM133AQ8N9E0 248 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 CNBD1Q8NA66 436 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 TPCN2Q8NHX9 752 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 MKL1Q969V6 931 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 SIX2Q9NPC8 291 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 ARMCX3Q9UH62 379 aaPredicted RBP11.29□□□□□ -0.6
SKA1-201ENST00000285116 ADAMTS1Q9UHI8 967 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 KIAA1024Q9UPX6 916 aa11.29□□□□□ -0.6
SKA1-201ENST00000285116 UFL1O94874 794 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 RPA1P27694 616 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 GBP2P32456 591 aaPredicted RBP11.28□□□□□ -0.6
SKA1-201ENST00000285116 HSD17B3P37058 310 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 GIT2Q14161 759 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 E2F5Q15329 346 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 UBE2SQ16763 222 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 QPCTQ16769 361 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 HERC4Q5GLZ8 1057 aaPredicted RBP11.28□□□□□ -0.6
SKA1-201ENST00000285116 MFSD14BQ5SR56 506 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 DCAF4Q8WV16 495 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 PACSIN1Q9BY11 444 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 TYW1Q9NV66 732 aaKnown RBP11.28□□□□□ -0.6
SKA1-201ENST00000285116 MKI67P46013 3256 aaKnown RBP11.28□□□□□ -0.6
SKA1-201ENST00000285116 UBE4BO95155 1302 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 E9PMD0 336 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 SLURP2P0DP57 97 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 NR2F2P24468 414 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 SHMT1P34896 483 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 EPS15P42566 896 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 PPP2R2AP63151 447 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 TCEAL1Q15170 157 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 MAB21L3Q8N8X9 362 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 ERMNQ8TAM6 284 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 CCT6BQ92526 530 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 TATDN2Q93075 761 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 HOOK2Q96ED9 719 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 HES6Q96HZ4 224 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 RSRC1Q96IZ7 334 aaKnown RBP11.28□□□□□ -0.6
SKA1-201ENST00000285116 CCDC17Q96LX7 622 aa11.28□□□□□ -0.6
SKA1-201ENST00000285116 NRXN2Q9P2S2 1712 aa11.27□□□□□ -0.6
SKA1-201ENST00000285116 SERPINB2P05120 415 aa11.27□□□□□ -0.6
SKA1-201ENST00000285116 RPL13P26373 211 aaKnown RBP11.27□□□□□ -0.6
SKA1-201ENST00000285116 HOXD13P35453 343 aa11.27□□□□□ -0.6
SKA1-201ENST00000285116 ZNF844Q08AG5 666 aa11.27□□□□□ -0.6
SKA1-201ENST00000285116 BYSLQ13895 437 aaKnown RBP11.27□□□□□ -0.6
SKA1-201ENST00000285116 HLTFQ14527 1009 aaKnown RBP eCLIP11.27□□□□□ -0.6
SKA1-201ENST00000285116 EXOC3L4Q17RC7 722 aa11.27□□□□□ -0.6
SKA1-201ENST00000285116 DPP8Q6V1X1 898 aaPredicted RBP11.27□□□□□ -0.6
SKA1-201ENST00000285116 ILDR2Q71H61 639 aa11.27□□□□□ -0.6
SKA1-201ENST00000285116 VPS36Q86VN1 386 aa11.27□□□□□ -0.6
SKA1-201ENST00000285116 LRRC47Q8N1G4 583 aaKnown RBP11.27□□□□□ -0.6
SKA1-201ENST00000285116 SLC30A5Q8TAD4 765 aa11.27□□□□□ -0.6
SKA1-201ENST00000285116 OLIG1Q8TAK6 271 aa11.27□□□□□ -0.6
SKA1-201ENST00000285116 HVCN1Q96D96 273 aa11.27□□□□□ -0.6
SKA1-201ENST00000285116 BORCS6Q96GS4 357 aa11.27□□□□□ -0.6
SKA1-201ENST00000285116 RBM17Q96I25 401 aaKnown RBP11.27□□□□□ -0.6
SKA1-201ENST00000285116 FAM20AQ96MK3 541 aa11.27□□□□□ -0.6
SKA1-201ENST00000285116 BATF3Q9NR55 127 aa11.27□□□□□ -0.6
SKA1-201ENST00000285116 OLFML3Q9NRN5 406 aa11.27□□□□□ -0.6
SKA1-201ENST00000285116 SERPINB13Q9UIV8 391 aa11.27□□□□□ -0.6
SKA1-201ENST00000285116 POTEB3A0JP26 581 aa11.27□□□□□ -0.61
SKA1-201ENST00000285116 KLRG2A4D1S0 409 aaPredicted RBP11.27□□□□□ -0.61
SKA1-201ENST00000285116 POTECB2RU33 542 aa11.27□□□□□ -0.61
SKA1-201ENST00000285116 EIF3DO15371 548 aaKnown RBP eCLIP11.27□□□□□ -0.61
SKA1-201ENST00000285116 ONECUT3O60422 494 aaPredicted RBP11.27□□□□□ -0.61
SKA1-201ENST00000285116 MED24O75448 989 aa11.27□□□□□ -0.61
SKA1-201ENST00000285116 FERP16591 822 aa11.27□□□□□ -0.61
SKA1-201ENST00000285116 CIITAP33076 1130 aa11.27□□□□□ -0.61
SKA1-201ENST00000285116 CTNNA1P35221 906 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms