RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 PSAPP07602 524 aa12.09□□□□□ -0.47
GGPS1-201ENST00000282841 KRT9P35527 623 aa12.09□□□□□ -0.47
GGPS1-201ENST00000282841 LRRC63Q05C16 580 aa12.09□□□□□ -0.47
GGPS1-201ENST00000282841 ZNF746Q6NUN9 644 aaPredicted RBP12.09□□□□□ -0.47
GGPS1-201ENST00000282841 SYCP3Q8IZU3 236 aa12.09□□□□□ -0.47
GGPS1-201ENST00000282841 IWS1Q96ST2 819 aa12.09□□□□□ -0.47
GGPS1-201ENST00000282841 CHP1Q99653 195 aa12.09□□□□□ -0.47
GGPS1-201ENST00000282841 ZNFX1Q9P2E3 1918 aaKnown RBP12.09□□□□□ -0.47
GGPS1-201ENST00000282841 SYNGAP1Q96PV0 1343 aa12.09□□□□□ -0.47
GGPS1-201ENST00000282841 GSTTP1A0A1W2PQM5 241 aa12.08□□□□□ -0.47
GGPS1-201ENST00000282841 FARP2O94887 1054 aaPredicted RBP12.08□□□□□ -0.47
GGPS1-201ENST00000282841 STBD1O95210 358 aa12.08□□□□□ -0.47
GGPS1-201ENST00000282841 SLC25A27O95847 323 aa12.08□□□□□ -0.47
GGPS1-201ENST00000282841 TRIM21P19474 475 aaKnown RBP12.08□□□□□ -0.47
GGPS1-201ENST00000282841 IRX5P78411 483 aaPredicted RBP12.08□□□□□ -0.47
GGPS1-201ENST00000282841 ENOX2Q16206 610 aaKnown RBP12.08□□□□□ -0.47
GGPS1-201ENST00000282841 VWA3BQ502W6 1294 aa12.08□□□□□ -0.47
GGPS1-201ENST00000282841 PRAMEF19Q5SWL8 479 aa12.08□□□□□ -0.47
GGPS1-201ENST00000282841 SAMD3Q8N6K7 520 aa12.08□□□□□ -0.47
GGPS1-201ENST00000282841 TRAPPC12Q8WVT3 735 aa12.08□□□□□ -0.47
GGPS1-201ENST00000282841 ELMO3Q96BJ8 720 aa12.08□□□□□ -0.47
GGPS1-201ENST00000282841 PCYT2Q99447 389 aa12.08□□□□□ -0.47
GGPS1-201ENST00000282841 STK24Q9Y6E0 443 aa12.08□□□□□ -0.47
GGPS1-201ENST00000282841 NR3C1P04150 777 aa12.08□□□□□ -0.48
GGPS1-201ENST00000282841 SFNP31947 248 aa12.08□□□□□ -0.48
GGPS1-201ENST00000282841 TCF7P36402 384 aaPredicted RBP12.08□□□□□ -0.48
GGPS1-201ENST00000282841 DRP2Q13474 957 aa12.08□□□□□ -0.48
GGPS1-201ENST00000282841 XRRA1Q6P2D8 792 aa12.08□□□□□ -0.48
GGPS1-201ENST00000282841 C4orf19Q8IY42 314 aa12.08□□□□□ -0.48
GGPS1-201ENST00000282841 GOLGA8IPA6NC78 632 aa12.08□□□□□ -0.48
GGPS1-201ENST00000282841 GOLGA8JA6NMD2 632 aa12.08□□□□□ -0.48
GGPS1-201ENST00000282841 MFAP3LO75121 409 aa12.08□□□□□ -0.48
GGPS1-201ENST00000282841 SUPT20HL2P0C7V6 817 aa12.08□□□□□ -0.48
GGPS1-201ENST00000282841 TXNP10599 105 aaKnown RBP12.08□□□□□ -0.48
GGPS1-201ENST00000282841 EDNRBP24530 442 aa12.08□□□□□ -0.48
GGPS1-201ENST00000282841 CHADLQ6NUI6 762 aa12.08□□□□□ -0.48
GGPS1-201ENST00000282841 RAD9BQ6WBX8 426 aa12.08□□□□□ -0.48
GGPS1-201ENST00000282841 ZNF302Q9NR11 478 aa12.08□□□□□ -0.48
GGPS1-201ENST00000282841 PNMA3Q9UL41 463 aa12.08□□□□□ -0.48
GGPS1-201ENST00000282841 DNAJC25-GNG10A0A024R161 153 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.07□□□□□ -0.48
GGPS1-201ENST00000282841 ABL1P00519 1130 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 ACTN1P12814 892 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 GUCY2CP25092 1073 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 COBLL1Q53SF7 1204 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 ARMCX2Q7L311 632 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 CCAR2Q8N163 923 aaKnown RBP12.07□□□□□ -0.48
GGPS1-201ENST00000282841 GLG1Q92896 1179 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 LENG1Q96BZ8 264 aaPredicted RBP12.07□□□□□ -0.48
GGPS1-201ENST00000282841 PPP1R16BQ96T49 567 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 NLRC4Q9NPP4 1024 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 MAFGO15525 162 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 GJB1P08034 283 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 ZSCAN20P17040 1043 aaPredicted RBP12.07□□□□□ -0.48
GGPS1-201ENST00000282841 ADCYAP1R1P41586 468 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 MIS18BP1Q6P0N0 1132 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 DPP9Q86TI2 863 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 FAM114A1Q8IWE2 563 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 CDHR1Q96JP9 859 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 CBWD1Q9BRT8 395 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 IRX2Q9BZI1 471 aaPredicted RBP12.07□□□□□ -0.48
GGPS1-201ENST00000282841 XPNPEP1Q9NQW7 623 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 OLFML3Q9NRN5 406 aa12.07□□□□□ -0.48
GGPS1-201ENST00000282841 DDX41Q9UJV9 622 aaKnown RBP12.07□□□□□ -0.48
GGPS1-201ENST00000282841 ABT1Q9ULW3 272 aaKnown RBP12.07□□□□□ -0.48
GGPS1-201ENST00000282841 MYH9P35579 1960 aaKnown RBP12.06□□□□□ -0.48
GGPS1-201ENST00000282841 ADGRA3Q8IWK6 1321 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 A0A0G2JMZ2 1700 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 CETN3O15182 167 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 LRRN2O75325 713 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 KIF20AO95235 890 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 TRIM49P0CI25 452 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 TRIM49CP0CI26 452 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 DNM2P50570 870 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 ZNF131P52739 623 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 HAUS6Q7Z4H7 955 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 GPR142Q7Z601 462 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 SAPCD2Q86UD0 394 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 NEK9Q8TD19 979 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 TSC1Q92574 1164 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 ATP6V0A1Q93050 837 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 SPATA33Q96N06 139 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 MROH8Q9H579 483 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 SUGCTQ9HAC7 445 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 CYP26B1Q9NR63 512 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 SPTLC3Q9NUV7 552 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 DBR1Q9UK59 544 aaKnown RBP12.06□□□□□ -0.48
GGPS1-201ENST00000282841 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.06□□□□□ -0.48
GGPS1-201ENST00000282841 IVNS1ABPQ9Y6Y0 642 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 NOP56O00567 594 aaKnown RBP12.06□□□□□ -0.48
GGPS1-201ENST00000282841 SLC26A4O43511 780 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 PLEKP08567 350 aaPredicted RBP12.06□□□□□ -0.48
GGPS1-201ENST00000282841 GAP43P17677 238 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 ARID5AQ03989 594 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 MAN2A1Q16706 1144 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 FKBP15Q5T1M5 1219 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 ACRBPQ8NEB7 543 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 ZBTB9Q96C00 473 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 PPP1R13BQ96KQ4 1090 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 ABHD10Q9NUJ1 306 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms