RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 GLIS3Q8NEA6 775 aa11.51□□□□□ -0.57
LRTM1-201ENST00000273286 APPBP2Q92624 585 aa11.51□□□□□ -0.57
LRTM1-201ENST00000273286 PUS7LQ9H0K6 701 aaKnown RBP11.51□□□□□ -0.57
LRTM1-201ENST00000273286 BCL11AQ9H165 835 aa11.51□□□□□ -0.57
LRTM1-201ENST00000273286 MKNK2Q9HBH9 465 aa11.51□□□□□ -0.57
LRTM1-201ENST00000273286 FAM105AQ9NUU6 356 aa11.51□□□□□ -0.57
LRTM1-201ENST00000273286 ZNF214Q9UL59 606 aaPredicted RBP11.51□□□□□ -0.57
LRTM1-201ENST00000273286 TACC3Q9Y6A5 838 aa11.51□□□□□ -0.57
LRTM1-201ENST00000273286 FOSL1P15407 271 aa11.5□□□□□ -0.57
LRTM1-201ENST00000273286 ADCYAP1R1P41586 468 aa11.5□□□□□ -0.57
LRTM1-201ENST00000273286 FAAP100Q0VG06 881 aa11.5□□□□□ -0.57
LRTM1-201ENST00000273286 MAP7Q14244 749 aa11.5□□□□□ -0.57
LRTM1-201ENST00000273286 ZNF792Q3KQV3 632 aa11.5□□□□□ -0.57
LRTM1-201ENST00000273286 FAM47AQ5JRC9 791 aa11.5□□□□□ -0.57
LRTM1-201ENST00000273286 Q7L0L9 218 aa11.5□□□□□ -0.57
LRTM1-201ENST00000273286 TMC7Q7Z402 723 aa11.5□□□□□ -0.57
LRTM1-201ENST00000273286 STRBPQ96SI9 672 aaKnown RBP11.5□□□□□ -0.57
LRTM1-201ENST00000273286 SLF1Q9BQI6 1058 aa11.5□□□□□ -0.57
LRTM1-201ENST00000273286 PRDM5Q9NQX1 630 aaPredicted RBP11.5□□□□□ -0.57
LRTM1-201ENST00000273286 FBXO40Q9UH90 709 aa11.5□□□□□ -0.57
LRTM1-201ENST00000273286 SYNGAP1Q96PV0 1343 aa11.49□□□□□ -0.57
LRTM1-201ENST00000273286 A0A0C4DFX4 3053 aa11.49□□□□□ -0.57
LRTM1-201ENST00000273286 LTBP2Q14767 1821 aa11.49□□□□□ -0.57
LRTM1-201ENST00000273286 CYP2D7A0A087X1C5 515 aa11.49□□□□□ -0.57
LRTM1-201ENST00000273286 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.49□□□□□ -0.57
LRTM1-201ENST00000273286 TRIM60Q495X7 471 aa11.49□□□□□ -0.57
LRTM1-201ENST00000273286 FAM83BQ5T0W9 1011 aa11.49□□□□□ -0.57
LRTM1-201ENST00000273286 NUP133Q8WUM0 1156 aa11.49□□□□□ -0.57
LRTM1-201ENST00000273286 DDX11Q96FC9 970 aa11.49□□□□□ -0.57
LRTM1-201ENST00000273286 NACAP1Q9BZK3 213 aa11.49□□□□□ -0.57
LRTM1-201ENST00000273286 SEMA6CQ9H3T2 930 aa11.49□□□□□ -0.57
LRTM1-201ENST00000273286 PDLIM7Q9NR12 457 aa11.49□□□□□ -0.57
LRTM1-201ENST00000273286 FBXO28Q9NVF7 368 aa11.49□□□□□ -0.57
LRTM1-201ENST00000273286 CTDP1Q9Y5B0 961 aaPredicted RBP11.49□□□□□ -0.57
LRTM1-201ENST00000273286 GREB1LQ9C091 1923 aaPredicted RBP11.48□□□□□ -0.57
LRTM1-201ENST00000273286 ZNFX1Q9P2E3 1918 aaKnown RBP11.48□□□□□ -0.57
LRTM1-201ENST00000273286 COL11A1P12107 1806 aaPredicted RBP11.48□□□□□ -0.57
LRTM1-201ENST00000273286 TMEM265A0A087WTH1 108 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 GSG1L2A8MUP6 293 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 F5H6K3 240 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 ZBED4O75132 1171 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 PGK2P07205 417 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 SLC3A2P08195 630 aaKnown RBP11.48□□□□□ -0.57
LRTM1-201ENST00000273286 CLTBP09497 229 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 ASPAP45381 313 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 TDO2P48775 406 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 OAZ1P54368 228 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 SMAD3P84022 425 aaKnown RBP11.48□□□□□ -0.57
LRTM1-201ENST00000273286 KLRC3Q07444 240 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 MSMPQ1L6U9 139 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 PRAMEF19Q5SWL8 479 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 ANO1Q5XXA6 986 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 MAMDC4Q6UXC1 1216 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 ZNF444Q8N0Y2 327 aaPredicted RBP11.48□□□□□ -0.57
LRTM1-201ENST00000273286 REPS2Q8NFH8 660 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 TOX2Q96NM4 488 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 ACSS3Q9H6R3 686 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 DCTN4Q9UJW0 460 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 FAM184BQ9ULE4 1060 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 GNEQ9Y223 722 aaKnown RBP11.48□□□□□ -0.57
LRTM1-201ENST00000273286 MROH7Q68CQ1 1323 aa11.48□□□□□ -0.57
LRTM1-201ENST00000273286 PLXNA1Q9UIW2 1896 aa11.47□□□□□ -0.57
LRTM1-201ENST00000273286 KRTAP9-6A0A140TA67 174 aa11.47□□□□□ -0.57
LRTM1-201ENST00000273286 FAM170BA6NMN3 283 aa11.47□□□□□ -0.57
LRTM1-201ENST00000273286 ERC2O15083 957 aa11.47□□□□□ -0.57
LRTM1-201ENST00000273286 RNF113AO15541 343 aaKnown RBP11.47□□□□□ -0.57
LRTM1-201ENST00000273286 SNRNP48Q6IEG0 339 aaKnown RBP11.47□□□□□ -0.57
LRTM1-201ENST00000273286 DTHD1Q6ZMT9 781 aa11.47□□□□□ -0.57
LRTM1-201ENST00000273286 CHST13Q8NET6 341 aa11.47□□□□□ -0.57
LRTM1-201ENST00000273286 GATA6Q92908 595 aa11.47□□□□□ -0.57
LRTM1-201ENST00000273286 MKL1Q969V6 931 aa11.47□□□□□ -0.57
LRTM1-201ENST00000273286 DCTPP1Q9H773 170 aa11.47□□□□□ -0.57
LRTM1-201ENST00000273286 SPC25Q9HBM1 224 aa11.47□□□□□ -0.57
LRTM1-201ENST00000273286 FEM1BQ9UK73 627 aa11.47□□□□□ -0.57
LRTM1-201ENST00000273286 TTC41PQ6P2S7 1318 aa11.47□□□□□ -0.57
LRTM1-201ENST00000273286 DNAJC25-GNG10A0A024R161 153 aa11.46□□□□□ -0.57
LRTM1-201ENST00000273286 A0A1W2PQ45 241 aaPredicted RBP11.46□□□□□ -0.57
LRTM1-201ENST00000273286 A0A1W2PQY0 241 aa11.46□□□□□ -0.57
LRTM1-201ENST00000273286 DCDC2CA8MYV0 355 aa11.46□□□□□ -0.57
LRTM1-201ENST00000273286 MINDY4BA8MYZ0 360 aa11.46□□□□□ -0.57
LRTM1-201ENST00000273286 GPAA1O43292 621 aa11.46□□□□□ -0.57
LRTM1-201ENST00000273286 TTLL1O95922 423 aa11.46□□□□□ -0.57
LRTM1-201ENST00000273286 NDUFB10O96000 172 aa11.46□□□□□ -0.57
LRTM1-201ENST00000273286 ZNF865P0CJ78 1059 aaPredicted RBP11.46□□□□□ -0.57
LRTM1-201ENST00000273286 TLE2Q04725 743 aa11.46□□□□□ -0.57
LRTM1-201ENST00000273286 PDE4BQ07343 736 aa11.46□□□□□ -0.57
LRTM1-201ENST00000273286 SHHQ15465 462 aa11.46□□□□□ -0.57
LRTM1-201ENST00000273286 ANKRD33Q7Z3H0 272 aa11.46□□□□□ -0.57
LRTM1-201ENST00000273286 PCSK9Q8NBP7 692 aaKnown RBP11.46□□□□□ -0.57
LRTM1-201ENST00000273286 GMCL1P1Q8NEA9 526 aa11.46□□□□□ -0.57
LRTM1-201ENST00000273286 BADQ92934 168 aa11.46□□□□□ -0.57
LRTM1-201ENST00000273286 OSBP2Q969R2 916 aa11.46□□□□□ -0.57
LRTM1-201ENST00000273286 FERMT2Q96AC1 680 aa11.46□□□□□ -0.57
LRTM1-201ENST00000273286 ABHD16BQ9H3Z7 469 aa11.46□□□□□ -0.57
LRTM1-201ENST00000273286 STARD7Q9NQZ5 370 aa11.46□□□□□ -0.57
LRTM1-201ENST00000273286 CLIP2Q9UDT6 1046 aa11.46□□□□□ -0.57
LRTM1-201ENST00000273286 SMCHD1A6NHR9 2005 aa11.46□□□□□ -0.58
LRTM1-201ENST00000273286 PLIN4Q96Q06 1357 aa11.46□□□□□ -0.58
LRTM1-201ENST00000273286 IGKV6D-41A0A0C4DH26 115 aa11.45□□□□□ -0.58
LRTM1-201ENST00000273286 PATL2C9JE40 543 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms