RNA–Protein interactions for RNA: ENST00000270570.8

SLC47A1-201, Transcript of solute carrier family 47 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC47A1, Length 3,280 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-201ENST00000270570 ARHGEF26Q96DR7 871 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 MRRFQ96E11 262 aaKnown RBP14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 DYDC2Q96IM9 177 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 THAP2Q9H0W7 228 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 CNOT8Q9UFF9 292 aaKnown RBP14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 AMFRQ9UKV5 643 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 CLRN2A0PK11 232 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 SHOX2O60902 331 aaPredicted RBP14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 FGFR4P22455 802 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 CDR1P51861 262 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 SPRED3Q2MJR0 410 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 ZFYVE27Q5T4F4 411 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 MMS22LQ6ZRQ5 1243 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 B4GALNT4Q76KP1 1039 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 FBXO11Q86XK2 927 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 MSL3Q8N5Y2 521 aaKnown RBP14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 CAVIN3Q969G5 261 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 EPN3Q9H201 632 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 SHBGP04278 402 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 HOXD13P35453 343 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 USP11P51784 963 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 ZNF844Q08AG5 666 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 PPP4R3AQ6IN85 833 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 KIRREL3Q8IZU9 778 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 SLC20A1Q8WUM9 679 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 THOC1Q96FV9 657 aaKnown RBP14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 CEP63Q96MT8 703 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 NUCKS1Q9H1E3 243 aaKnown RBP14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 TMX4Q9H1E5 349 aaPredicted RBP14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 TDRD3Q9H7E2 651 aaKnown RBP14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 PCDHGC5Q9Y5F6 944 aa14.3□□□□□ -0.12
SLC47A1-201ENST00000270570 ESYT2A0FGR8 921 aa14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 MEFVO15553 781 aaPredicted RBP14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 CALUO43852 315 aaPredicted RBP14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 CTNND1O60716 968 aaKnown RBP14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 LCA5LO95447 670 aa14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 GNA14O95837 355 aa14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 VIMP08670 466 aaKnown RBP14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 SLC12A3P55017 1021 aa14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 CBWD6Q4V339 395 aa14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 CBWD3Q5JTY5 395 aa14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 CBWD5Q5RIA9 395 aa14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 FAM178BQ8IXR5 827 aa14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 TEKT1Q969V4 418 aa14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 TBC1D31Q96DN5 1066 aa14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 EIF2AK1Q9BQI3 630 aaKnown RBP14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 CXorf56Q9H5V9 222 aa14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 ERVK-5Q9HDB9 667 aa14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 PPP1R12BO60237 982 aaPredicted RBP14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 ECE1P42892 770 aa14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 SSR1P43307 286 aaKnown RBP14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 GCLMP48507 274 aa14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 GPATCH4Q5T3I0 446 aaKnown RBP14.29□□□□□ -0.12
SLC47A1-201ENST00000270570 CNTNAP4Q9C0A0 1308 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 MSH4O15457 936 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 EPC2Q52LR7 807 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 MEX3CQ5U5Q3 659 aaKnown RBP14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 HS2ST1Q7LGA3 356 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 WHAMMQ8TF30 809 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 KAT5Q92993 513 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 SLC35C1Q96A29 364 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 C18orf8Q96DM3 657 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 CYFIP2Q96F07 1278 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 TCP10L2B9ZVM9 353 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 MEIS2O14770 477 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 PPEF1O14829 653 aaPredicted RBP14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 CAND2O75155 1236 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 SPATA31C1P0DKV0 1188 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 RPL13P26373 211 aaKnown RBP14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 KCNV1Q6PIU1 500 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 CPXCR1Q8N123 301 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 TBC1D22AQ8WUA7 517 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 DYDC1Q8WWB3 177 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 LRRC45Q96CN5 670 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 FMO2Q99518 471 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 UBE2TQ9NPD8 197 aaPredicted RBP14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 HAUS2Q9NVX0 235 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 USP21Q9UK80 565 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 RDXP35241 583 aaKnown RBP14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 LRCH2Q5VUJ6 765 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 CCDC91Q7Z6B0 441 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 ZSWIM2Q8NEG5 633 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 CCDC26Q8TAB7 109 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 IQCDQ96DY2 449 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 AMNQ9BXJ7 453 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 DNAJC18Q9H819 358 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 PLCB1Q9NQ66 1216 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 PCDHA2Q9Y5H9 948 aa14.28□□□□□ -0.12
SLC47A1-201ENST00000270570 KDM4FA0A1W2PPD8 638 aa14.27□□□□□ -0.12
SLC47A1-201ENST00000270570 NDUFB10O96000 172 aa14.27□□□□□ -0.12
SLC47A1-201ENST00000270570 ITGB3BPQ13352 177 aaPredicted RBP14.27□□□□□ -0.12
SLC47A1-201ENST00000270570 ZKSCAN8Q15776 578 aaPredicted RBP14.27□□□□□ -0.12
SLC47A1-201ENST00000270570 IFI16Q16666 785 aaKnown RBP14.27□□□□□ -0.12
SLC47A1-201ENST00000270570 GLE1Q53GS7 698 aaKnown RBP14.27□□□□□ -0.12
SLC47A1-201ENST00000270570 FAM133BQ5BKY9 247 aaKnown RBP14.27□□□□□ -0.12
SLC47A1-201ENST00000270570 DAB2IPQ5VWQ8 1189 aa14.27□□□□□ -0.12
SLC47A1-201ENST00000270570 MCTP2Q6DN12 878 aa14.27□□□□□ -0.12
SLC47A1-201ENST00000270570 CAPN12Q6ZSI9 719 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms