RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 ERVK-5Q9HDB9 667 aa29.89■■■□□ 2.37
CBX4-201ENST00000269397 DNM3Q9UQ16 869 aa29.89■■■□□ 2.37
CBX4-201ENST00000269397 CHUKO15111 745 aa29.88■■■□□ 2.37
CBX4-201ENST00000269397 CALUO43852 315 aaPredicted RBP29.88■■■□□ 2.37
CBX4-201ENST00000269397 FAM98CQ17RN3 349 aaKnown RBP29.88■■■□□ 2.37
CBX4-201ENST00000269397 QRICH1Q2TAL8 776 aa29.88■■■□□ 2.37
CBX4-201ENST00000269397 CXorf56Q9H5V9 222 aa29.88■■■□□ 2.37
CBX4-201ENST00000269397 SPATA31C1P0DKV0 1188 aa29.88■■■□□ 2.37
CBX4-201ENST00000269397 POLD1P28340 1107 aa29.88■■■□□ 2.37
CBX4-201ENST00000269397 PLCB4Q15147 1175 aa29.88■■■□□ 2.37
CBX4-201ENST00000269397 SYCE1Q8N0S2 351 aa29.88■■■□□ 2.37
CBX4-201ENST00000269397 TATDN2Q93075 761 aa29.88■■■□□ 2.37
CBX4-201ENST00000269397 RDXP35241 583 aaKnown RBP29.87■■■□□ 2.37
CBX4-201ENST00000269397 POU5F1Q01860 360 aaKnown RBP29.87■■■□□ 2.37
CBX4-201ENST00000269397 EPM2AIP1Q7L775 607 aaPredicted RBP29.87■■■□□ 2.37
CBX4-201ENST00000269397 TLDC2A0PJX2 215 aa29.87■■■□□ 2.37
CBX4-201ENST00000269397 PDXKO00764 312 aa29.87■■■□□ 2.37
CBX4-201ENST00000269397 TAL1P17542 331 aaPredicted RBP29.87■■■□□ 2.37
CBX4-201ENST00000269397 SPIRE1Q08AE8 756 aa29.87■■■□□ 2.37
CBX4-201ENST00000269397 BHMT2Q9H2M3 363 aa29.87■■■□□ 2.37
CBX4-201ENST00000269397 FAM114A2Q9NRY5 505 aa29.87■■■□□ 2.37
CBX4-201ENST00000269397 SPDYE3A6NKU9 549 aa29.86■■■□□ 2.37
CBX4-201ENST00000269397 SHROOM1Q2M3G4 852 aaPredicted RBP29.86■■■□□ 2.37
CBX4-201ENST00000269397 GKAP1Q5VSY0 366 aaPredicted RBP29.86■■■□□ 2.37
CBX4-201ENST00000269397 AADACL2Q6P093 401 aa29.86■■■□□ 2.37
CBX4-201ENST00000269397 CYB5D1Q6P9G0 228 aa29.86■■■□□ 2.37
CBX4-201ENST00000269397 SLC30A10Q6XR72 485 aa29.86■■■□□ 2.37
CBX4-201ENST00000269397 KSR1Q8IVT5 923 aa29.86■■■□□ 2.37
CBX4-201ENST00000269397 FUKQ8N0W3 1084 aa29.86■■■□□ 2.37
CBX4-201ENST00000269397 RUSC1Q9BVN2 902 aa29.86■■■□□ 2.37
CBX4-201ENST00000269397 SEPT11Q9NVA2 429 aaKnown RBP29.86■■■□□ 2.37
CBX4-201ENST00000269397 PLIN4Q96Q06 1357 aa29.86■■■□□ 2.37
CBX4-201ENST00000269397 GAKO14976 1311 aa29.86■■■□□ 2.37
CBX4-201ENST00000269397 IL1R1P14778 569 aa29.86■■■□□ 2.37
CBX4-201ENST00000269397 GTF2IP78347 998 aa29.86■■■□□ 2.37
CBX4-201ENST00000269397 DRP2Q13474 957 aa29.86■■■□□ 2.37
CBX4-201ENST00000269397 CNBD1Q8NA66 436 aa29.86■■■□□ 2.37
CBX4-201ENST00000269397 SEC14L1Q92503 715 aa29.86■■■□□ 2.37
CBX4-201ENST00000269397 SERPINB13Q9UIV8 391 aa29.86■■■□□ 2.37
CBX4-201ENST00000269397 GGA1Q9UJY5 639 aa29.86■■■□□ 2.37
CBX4-201ENST00000269397 OPLAHO14841 1288 aa29.85■■■□□ 2.37
CBX4-201ENST00000269397 SCTRP47872 440 aa29.85■■■□□ 2.37
CBX4-201ENST00000269397 CEP57Q86XR8 500 aa29.85■■■□□ 2.37
CBX4-201ENST00000269397 SYT2Q8N9I0 419 aaPredicted RBP29.85■■■□□ 2.37
CBX4-201ENST00000269397 UHMK1Q8TAS1 419 aaKnown RBP29.85■■■□□ 2.37
CBX4-201ENST00000269397 ACTR5Q9H9F9 607 aaPredicted RBP29.85■■■□□ 2.37
CBX4-201ENST00000269397 CTNND1O60716 968 aaKnown RBP29.85■■■□□ 2.37
CBX4-201ENST00000269397 DRD4P21917 467 aa29.85■■■□□ 2.37
CBX4-201ENST00000269397 STAT1P42224 750 aa29.85■■■□□ 2.37
CBX4-201ENST00000269397 UBAP2Q5T6F2 1119 aaKnown RBP29.85■■■□□ 2.37
CBX4-201ENST00000269397 OLIG1Q8TAK6 271 aa29.85■■■□□ 2.37
CBX4-201ENST00000269397 RPGRQ92834 1020 aaKnown RBP29.85■■■□□ 2.37
CBX4-201ENST00000269397 ARHGEF26Q96DR7 871 aa29.85■■■□□ 2.37
CBX4-201ENST00000269397 FAM163AQ96GL9 167 aaPredicted RBP29.85■■■□□ 2.37
CBX4-201ENST00000269397 TYW1Q9NV66 732 aaKnown RBP29.85■■■□□ 2.37
CBX4-201ENST00000269397 A0A0A6YYK5 440 aaPredicted RBP29.84■■■□□ 2.37
CBX4-201ENST00000269397 PLTPP55058 493 aa29.84■■■□□ 2.37
CBX4-201ENST00000269397 DR1Q01658 176 aa29.84■■■□□ 2.37
CBX4-201ENST00000269397 SCLT1Q96NL6 688 aa29.84■■■□□ 2.37
CBX4-201ENST00000269397 TAS2R14Q9NYV8 317 aa29.84■■■□□ 2.37
CBX4-201ENST00000269397 TMOD4Q9NZQ9 345 aa29.84■■■□□ 2.37
CBX4-201ENST00000269397 SWAP70Q9UH65 585 aa29.84■■■□□ 2.37
CBX4-201ENST00000269397 C5orf60A6NFR6 353 aa29.84■■■□□ 2.37
CBX4-201ENST00000269397 PAEPP09466 180 aa29.84■■■□□ 2.37
CBX4-201ENST00000269397 ARHGAP4P98171 946 aa29.84■■■□□ 2.37
CBX4-201ENST00000269397 SELENOSQ9BQE4 189 aa29.84■■■□□ 2.37
CBX4-201ENST00000269397 POLLQ9UGP5 575 aa29.84■■■□□ 2.37
CBX4-201ENST00000269397 SNX24Q9Y343 169 aa29.84■■■□□ 2.37
CBX4-201ENST00000269397 DDX3YO15523 660 aaKnown RBP29.83■■■□□ 2.37
CBX4-201ENST00000269397 SHMT1P34896 483 aa29.83■■■□□ 2.37
CBX4-201ENST00000269397 FAM182BQ5T319 152 aa29.83■■■□□ 2.37
CBX4-201ENST00000269397 GPATCH4Q5T3I0 446 aaKnown RBP29.83■■■□□ 2.37
CBX4-201ENST00000269397 PALB2Q86YC2 1186 aa29.83■■■□□ 2.37
CBX4-201ENST00000269397 SLF2Q8IX21 1173 aa29.83■■■□□ 2.37
CBX4-201ENST00000269397 PARP9Q8IXQ6 854 aa29.83■■■□□ 2.37
CBX4-201ENST00000269397 ETNPPLQ8TBG4 499 aa29.83■■■□□ 2.37
CBX4-201ENST00000269397 PPFIA2O75334 1257 aa29.83■■■□□ 2.37
CBX4-201ENST00000269397 FERP16591 822 aa29.83■■■□□ 2.37
CBX4-201ENST00000269397 FAM228AQ86W67 206 aa29.83■■■□□ 2.37
CBX4-201ENST00000269397 SLFN12Q8IYM2 578 aa29.83■■■□□ 2.37
CBX4-201ENST00000269397 XPO6Q96QU8 1125 aaKnown RBP29.83■■■□□ 2.37
CBX4-201ENST00000269397 RGL1Q9NZL6 768 aa29.83■■■□□ 2.37
CBX4-201ENST00000269397 COL24A1Q17RW2 1714 aa29.83■■■□□ 2.37
CBX4-201ENST00000269397 FAM196BA6NMK8 535 aa29.82■■■□□ 2.36
CBX4-201ENST00000269397 ZC2HC1CQ53FD0 456 aaPredicted RBP29.82■■■□□ 2.36
CBX4-201ENST00000269397 C3orf20Q8ND61 904 aa29.82■■■□□ 2.36
CBX4-201ENST00000269397 MXD3Q9BW11 206 aa29.82■■■□□ 2.36
CBX4-201ENST00000269397 EPB41L4BQ9H329 900 aa29.82■■■□□ 2.36
CBX4-201ENST00000269397 BCS1LQ9Y276 419 aa29.82■■■□□ 2.36
CBX4-201ENST00000269397 C6orf229H3BNL8 230 aa29.82■■■□□ 2.36
CBX4-201ENST00000269397 RPL13P26373 211 aaKnown RBP29.82■■■□□ 2.36
CBX4-201ENST00000269397 COG2Q14746 738 aa29.82■■■□□ 2.36
CBX4-201ENST00000269397 DRAP1Q14919 205 aaPredicted RBP29.82■■■□□ 2.36
CBX4-201ENST00000269397 SLC30A5Q8TAD4 765 aa29.82■■■□□ 2.36
CBX4-201ENST00000269397 CYP2W1Q8TAV3 490 aa29.82■■■□□ 2.36
CBX4-201ENST00000269397 TLCD1Q96CP7 247 aa29.82■■■□□ 2.36
CBX4-201ENST00000269397 HVCN1Q96D96 273 aa29.82■■■□□ 2.36
CBX4-201ENST00000269397 METTL14Q9HCE5 456 aaKnown RBP29.82■■■□□ 2.36
CBX4-201ENST00000269397 FAM86B1E9PN63 330 aa29.81■■■□□ 2.36
CBX4-201ENST00000269397 MEIS2O14770 477 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms