RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 NKRFO15226 690 aaKnown RBP eCLIP18.04■□□□□ 0.481e-6■■□□□ 14
TPM1-201ENST00000267996 TGFB1I1O43294 461 aa18.04■□□□□ 0.48
TPM1-201ENST00000267996 CALUO43852 315 aaPredicted RBP18.04■□□□□ 0.48
TPM1-201ENST00000267996 TPM2P07951 284 aa18.04■□□□□ 0.48
TPM1-201ENST00000267996 PRKCSHP14314 528 aaPredicted RBP18.04■□□□□ 0.48
TPM1-201ENST00000267996 KCNA1Q09470 495 aa18.04■□□□□ 0.48
TPM1-201ENST00000267996 MAN2A1Q16706 1144 aa18.04■□□□□ 0.48
TPM1-201ENST00000267996 ZC2HC1CQ53FD0 456 aaPredicted RBP18.04■□□□□ 0.48
TPM1-201ENST00000267996 TC2NQ8N9U0 490 aa18.04■□□□□ 0.48
TPM1-201ENST00000267996 SCFD2Q8WU76 684 aa18.04■□□□□ 0.48
TPM1-201ENST00000267996 NOC4LQ9BVI4 516 aaKnown RBP18.04■□□□□ 0.48
TPM1-201ENST00000267996 NIFKQ9BYG3 293 aaKnown RBP18.04■□□□□ 0.48
TPM1-201ENST00000267996 KATNBL1Q9H079 304 aa18.04■□□□□ 0.48
TPM1-201ENST00000267996 MLXIPQ9HAP2 919 aa18.04■□□□□ 0.48
TPM1-201ENST00000267996 VTA1Q9NP79 307 aa18.04■□□□□ 0.48
TPM1-201ENST00000267996 CYP26B1Q9NR63 512 aa18.04■□□□□ 0.48
TPM1-201ENST00000267996 SLC15A5A6NIM6 579 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 CETN3O15182 167 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 LGR5O75473 907 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 DGAT1O75907 488 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 OATP04181 439 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 SKILP12757 684 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 ADAM9Q13443 819 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 TTLL4Q14679 1199 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 VWA3BQ502W6 1294 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 TAPT1Q6NXT6 567 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 MAEAQ7L5Y9 396 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 IFNL1Q8IU54 200 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 GPR20Q99678 358 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 SEPT9Q9UHD8 586 aaPredicted RBP18.03■□□□□ 0.48
TPM1-201ENST00000267996 CPA4Q9UI42 421 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.03■□□□□ 0.481e-6■■■□□ 19.1
TPM1-201ENST00000267996 RTP1P59025 263 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 FAM160B1Q5W0V3 765 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 CEP135Q66GS9 1140 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 SLC17A8Q8NDX2 589 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 CCDC112Q8NEF3 446 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 MCPH1Q8NEM0 835 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 KIFAP3Q92845 792 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 CCDC102AQ96A19 550 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 HHIPL1Q96JK4 782 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 ERGIC2Q96RQ1 377 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 CEP89Q96ST8 783 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 C17orf75Q9HAS0 396 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 GPBP1L1Q9HC44 474 aaPredicted RBP18.03■□□□□ 0.48
TPM1-201ENST00000267996 GPRC5CQ9NQ84 441 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 XPNPEP1Q9NQW7 623 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 PDGFCQ9NRA1 345 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 SPTLC3Q9NUV7 552 aa18.03■□□□□ 0.48
TPM1-201ENST00000267996 SNAI1O95863 264 aaPredicted RBP18.02■□□□□ 0.47
TPM1-201ENST00000267996 TXNP10599 105 aaKnown RBP18.02■□□□□ 0.47
TPM1-201ENST00000267996 NR2F2P24468 414 aa18.02■□□□□ 0.47
TPM1-201ENST00000267996 RPL13P26373 211 aaKnown RBP18.02■□□□□ 0.47
TPM1-201ENST00000267996 TCF7P36402 384 aaPredicted RBP18.02■□□□□ 0.47
TPM1-201ENST00000267996 STAT5BP51692 787 aa18.02■□□□□ 0.47
TPM1-201ENST00000267996 NCKAP1LP55160 1127 aa18.02■□□□□ 0.47
TPM1-201ENST00000267996 GTF2BQ00403 316 aa18.02■□□□□ 0.47
TPM1-201ENST00000267996 RBL2Q08999 1139 aa18.02■□□□□ 0.47
TPM1-201ENST00000267996 TBC1D8BQ0IIM8 1120 aa18.02■□□□□ 0.47
TPM1-201ENST00000267996 TRIM14Q14142 442 aa18.02■□□□□ 0.47
TPM1-201ENST00000267996 TAF1CQ15572 869 aaPredicted RBP18.02■□□□□ 0.47
TPM1-201ENST00000267996 FAM102BQ5T8I3 360 aa18.02■□□□□ 0.47
TPM1-201ENST00000267996 C17orf99Q6UX52 265 aa18.02■□□□□ 0.47
TPM1-201ENST00000267996 TRMT1LQ7Z2T5 733 aaKnown RBP18.02■□□□□ 0.47
TPM1-201ENST00000267996 PPFIBP1Q86W92 1011 aa18.02■□□□□ 0.47
TPM1-201ENST00000267996 TRIM59Q8IWR1 403 aa18.02■□□□□ 0.47
TPM1-201ENST00000267996 SMC1BQ8NDV3 1235 aa18.02■□□□□ 0.47
TPM1-201ENST00000267996 SPIRE2Q8WWL2 714 aa18.02■□□□□ 0.47
TPM1-201ENST00000267996 MAML3Q96JK9 1138 aa18.02■□□□□ 0.47
TPM1-201ENST00000267996 NTPCRQ9BSD7 190 aaKnown RBP18.02■□□□□ 0.47
TPM1-201ENST00000267996 NDST4Q9H3R1 872 aa18.02■□□□□ 0.47
TPM1-201ENST00000267996 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.02■□□□□ 0.47
TPM1-201ENST00000267996 AKR1B15C9JRZ8 316 aaPredicted RBP18.01■□□□□ 0.47
TPM1-201ENST00000267996 K7ENM7 598 aa18.01■□□□□ 0.47
TPM1-201ENST00000267996 NR3C1P04150 777 aa18.01■□□□□ 0.47
TPM1-201ENST00000267996 GYPCP04921 128 aa18.01■□□□□ 0.47
TPM1-201ENST00000267996 KCNJ6P48051 423 aa18.01■□□□□ 0.47
TPM1-201ENST00000267996 TARBP2Q15633 366 aaKnown RBP18.01■□□□□ 0.47
TPM1-201ENST00000267996 HSDL1Q3SXM5 330 aa18.01■□□□□ 0.47
TPM1-201ENST00000267996 MORN1Q5T089 497 aa18.01■□□□□ 0.47
TPM1-201ENST00000267996 DPP9Q86TI2 863 aa18.01■□□□□ 0.47
TPM1-201ENST00000267996 TMEM139Q8IV31 216 aa18.01■□□□□ 0.47
TPM1-201ENST00000267996 DHX37Q8IY37 1157 aaKnown RBP18.01■□□□□ 0.47
TPM1-201ENST00000267996 GOLGA5Q8TBA6 731 aa18.01■□□□□ 0.47
TPM1-201ENST00000267996 TMEM174Q8WUU8 243 aa18.01■□□□□ 0.47
TPM1-201ENST00000267996 PANX2Q96RD6 677 aa18.01■□□□□ 0.47
TPM1-201ENST00000267996 DHX33Q9H6R0 707 aaKnown RBP18.01■□□□□ 0.47
TPM1-201ENST00000267996 DMAC2Q9NW81 257 aa18.01■□□□□ 0.47
TPM1-201ENST00000267996 TLR2O60603 784 aa18■□□□□ 0.47
TPM1-201ENST00000267996 PEX3P56589 373 aa18■□□□□ 0.47
TPM1-201ENST00000267996 GOLGA8FQ08AF8 430 aa18■□□□□ 0.47
TPM1-201ENST00000267996 GOLGA8DPQ0D2H9 430 aa18■□□□□ 0.47
TPM1-201ENST00000267996 CCDC40Q4G0X9 1142 aa18■□□□□ 0.47
TPM1-201ENST00000267996 PLPPR4Q7Z2D5 763 aa18■□□□□ 0.47
TPM1-201ENST00000267996 FRMD5Q7Z6J6 570 aa18■□□□□ 0.47
TPM1-201ENST00000267996 MSL3Q8N5Y2 521 aaKnown RBP18■□□□□ 0.47
TPM1-201ENST00000267996 COPS5Q92905 334 aa18■□□□□ 0.47
TPM1-201ENST00000267996 GBP3Q9H0R5 595 aa18■□□□□ 0.47
TPM1-201ENST00000267996 ATP6V0A4Q9HBG4 840 aa18■□□□□ 0.47
TPM1-201ENST00000267996 NRBP2Q9NSY0 501 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms