RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 KCND1Q9NSA2 647 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 ABHD10Q9NUJ1 306 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 SEPT9Q9UHD8 586 aaPredicted RBP12.73□□□□□ -0.37
SCAF11-201ENST00000266589 PCDHB13Q9Y5F0 798 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 TTC26A0AVF1 554 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 PPP1R37O75864 691 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 ATG7O95352 703 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 ITGBL1O95965 494 aaPredicted RBP12.73□□□□□ -0.37
SCAF11-201ENST00000266589 MAPTP10636 758 aaKnown RBP12.73□□□□□ -0.37
SCAF11-201ENST00000266589 TRIM21P19474 475 aaKnown RBP12.73□□□□□ -0.37
SCAF11-201ENST00000266589 RPL13P26373 211 aaKnown RBP12.73□□□□□ -0.37
SCAF11-201ENST00000266589 KRT9P35527 623 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 HUNKP57058 714 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 LY6KQ17RY6 165 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 FAM102BQ5T8I3 360 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 TRIM59Q8IWR1 403 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 PTPN18Q99952 460 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 STRA6Q9BX79 667 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 NAA15Q9BXJ9 866 aaKnown RBP12.73□□□□□ -0.37
SCAF11-201ENST00000266589 ZNF302Q9NR11 478 aa12.73□□□□□ -0.37
SCAF11-201ENST00000266589 CLIC2O15247 247 aa12.72□□□□□ -0.37
SCAF11-201ENST00000266589 GGPS1O95749 300 aa12.72□□□□□ -0.37
SCAF11-201ENST00000266589 CHADLQ6NUI6 762 aa12.72□□□□□ -0.37
SCAF11-201ENST00000266589 FBXO16Q8IX29 292 aaPredicted RBP12.72□□□□□ -0.37
SCAF11-201ENST00000266589 RETREG2Q8NC44 543 aa12.72□□□□□ -0.37
SCAF11-201ENST00000266589 PARK7Q99497 189 aaKnown RBP12.72□□□□□ -0.37
SCAF11-201ENST00000266589 NUP58Q9BVL2 599 aa12.72□□□□□ -0.37
SCAF11-201ENST00000266589 MORF4L1Q9UBU8 362 aa12.72□□□□□ -0.37
SCAF11-201ENST00000266589 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.72□□□□□ -0.37
SCAF11-201ENST00000266589 RASSF10A6NK89 507 aa12.71□□□□□ -0.37
SCAF11-201ENST00000266589 AKAP3O75969 853 aa12.71□□□□□ -0.37
SCAF11-201ENST00000266589 ARIH2O95376 493 aa12.71□□□□□ -0.37
SCAF11-201ENST00000266589 PEX3P56589 373 aa12.71□□□□□ -0.37
SCAF11-201ENST00000266589 ALCAMQ13740 583 aa12.71□□□□□ -0.37
SCAF11-201ENST00000266589 XKR3Q5GH77 459 aa12.71□□□□□ -0.37
SCAF11-201ENST00000266589 KCNV1Q6PIU1 500 aa12.71□□□□□ -0.37
SCAF11-201ENST00000266589 METTL7BQ6UX53 244 aa12.71□□□□□ -0.37
SCAF11-201ENST00000266589 HS2ST1Q7LGA3 356 aa12.71□□□□□ -0.37
SCAF11-201ENST00000266589 MORC4Q8TE76 937 aa12.71□□□□□ -0.37
SCAF11-201ENST00000266589 TTYH3Q9C0H2 523 aa12.71□□□□□ -0.37
SCAF11-201ENST00000266589 GBP3Q9H0R5 595 aa12.71□□□□□ -0.37
SCAF11-201ENST00000266589 CYP26B1Q9NR63 512 aa12.71□□□□□ -0.37
SCAF11-201ENST00000266589 DDX41Q9UJV9 622 aaKnown RBP12.71□□□□□ -0.37
SCAF11-201ENST00000266589 CAPN11Q9UMQ6 739 aa12.71□□□□□ -0.37
SCAF11-201ENST00000266589 SIK3Q9Y2K2 1263 aa12.71□□□□□ -0.37
SCAF11-201ENST00000266589 LUC7L2Q9Y383 392 aaKnown RBP12.71□□□□□ -0.37
SCAF11-201ENST00000266589 MAFBQ9Y5Q3 323 aaPredicted RBP12.71□□□□□ -0.37
SCAF11-201ENST00000266589 IGKV6D-21A0A0A0MT36 114 aa12.71□□□□□ -0.38
SCAF11-201ENST00000266589 LOC102724159A0A0B4J2E5 919 aa12.71□□□□□ -0.38
SCAF11-201ENST00000266589 GSTTP1A0A1W2PQM5 241 aa12.71□□□□□ -0.38
SCAF11-201ENST00000266589 SOWAHDA6NJG2 315 aa12.71□□□□□ -0.38
SCAF11-201ENST00000266589 ASB14A6NK59 587 aa12.71□□□□□ -0.38
SCAF11-201ENST00000266589 SLC16A3O15427 465 aaKnown RBP12.71□□□□□ -0.38
SCAF11-201ENST00000266589 DGAT1O75907 488 aa12.71□□□□□ -0.38
SCAF11-201ENST00000266589 OATP04181 439 aa12.71□□□□□ -0.38
SCAF11-201ENST00000266589 ATP4AP20648 1035 aa12.71□□□□□ -0.38
SCAF11-201ENST00000266589 FECHP22830 423 aa12.71□□□□□ -0.38
SCAF11-201ENST00000266589 ADORA2AP29274 412 aa12.71□□□□□ -0.38
SCAF11-201ENST00000266589 PWP2Q15269 919 aaKnown RBP12.71□□□□□ -0.38
SCAF11-201ENST00000266589 NFIL3Q16649 462 aa12.71□□□□□ -0.38
SCAF11-201ENST00000266589 FRMD5Q7Z6J6 570 aa12.71□□□□□ -0.38
SCAF11-201ENST00000266589 SYCP3Q8IZU3 236 aa12.71□□□□□ -0.38
SCAF11-201ENST00000266589 CCDC155Q8N6L0 562 aa12.71□□□□□ -0.38
SCAF11-201ENST00000266589 PPP1R13BQ96KQ4 1090 aa12.71□□□□□ -0.38
SCAF11-201ENST00000266589 MLXIPQ9HAP2 919 aa12.71□□□□□ -0.38
SCAF11-201ENST00000266589 ARMCX3Q9UH62 379 aaPredicted RBP12.71□□□□□ -0.38
SCAF11-201ENST00000266589 FAM184BQ9ULE4 1060 aa12.71□□□□□ -0.38
SCAF11-201ENST00000266589 SLC16A4O15374 487 aa12.7□□□□□ -0.38
SCAF11-201ENST00000266589 CCP110O43303 1012 aa12.7□□□□□ -0.38
SCAF11-201ENST00000266589 EPB41P11171 864 aaKnown RBP12.7□□□□□ -0.38
SCAF11-201ENST00000266589 CASP4P49662 377 aa12.7□□□□□ -0.38
SCAF11-201ENST00000266589 SOX10P56693 466 aa12.7□□□□□ -0.38
SCAF11-201ENST00000266589 MTERF2Q49AM1 385 aa12.7□□□□□ -0.38
SCAF11-201ENST00000266589 FIGNQ5HY92 759 aa12.7□□□□□ -0.38
SCAF11-201ENST00000266589 TOGARAM2Q6ZUX3 1019 aa12.7□□□□□ -0.38
SCAF11-201ENST00000266589 HAUS6Q7Z4H7 955 aa12.7□□□□□ -0.38
SCAF11-201ENST00000266589 ATP6V0A4Q9HBG4 840 aa12.7□□□□□ -0.38
SCAF11-201ENST00000266589 AGPAT3Q9NRZ7 376 aa12.7□□□□□ -0.38
SCAF11-201ENST00000266589 AGPAT5Q9NUQ2 364 aa12.7□□□□□ -0.38
SCAF11-201ENST00000266589 IVNS1ABPQ9Y6Y0 642 aa12.7□□□□□ -0.38
SCAF11-201ENST00000266589 TCF7P36402 384 aaPredicted RBP12.69□□□□□ -0.38
SCAF11-201ENST00000266589 NCKAP1LP55160 1127 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 DMP1Q13316 513 aaPredicted RBP12.69□□□□□ -0.38
SCAF11-201ENST00000266589 MTF1Q14872 753 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 RAD9BQ6WBX8 426 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 NYAP1Q6ZVC0 841 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 ARMCX2Q7L311 632 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 RASAL3Q86YV0 1011 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 SLC17A8Q8NDX2 589 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 MCPH1Q8NEM0 835 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 OR8K1Q8NGG5 319 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 GOLGA5Q8TBA6 731 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 SEPT1Q8WYJ6 367 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 KIFAP3Q92845 792 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 IQCDQ96DY2 449 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 ACCSQ96QU6 501 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 PCYT2Q99447 389 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 DNAJC7Q99615 494 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 ST6GALNAC4Q9H4F1 302 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 TMEM206Q9H813 350 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms