RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 USTQ9Y2C2 406 aa15.74■□□□□ 0.11
PDLIM2-201ENST00000265810 PDXKO00764 312 aa15.74■□□□□ 0.11
PDLIM2-201ENST00000265810 PTK2Q05397 1052 aa15.74■□□□□ 0.11
PDLIM2-201ENST00000265810 RINT1Q6NUQ1 792 aa15.74■□□□□ 0.11
PDLIM2-201ENST00000265810 PEX26Q7Z412 305 aa15.74■□□□□ 0.11
PDLIM2-201ENST00000265810 NUDT12Q9BQG2 462 aa15.74■□□□□ 0.11
PDLIM2-201ENST00000265810 SMARCAD1Q9H4L7 1026 aa15.74■□□□□ 0.11
PDLIM2-201ENST00000265810 PPP1R3GB7ZBB8 358 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 GH1P01241 217 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 CNTN2Q02246 1040 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 MAP2K1Q02750 393 aaPredicted RBP15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 ZNF746Q6NUN9 644 aaPredicted RBP15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 TTC16Q8NEE8 873 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 A1CFQ9NQ94 594 aaKnown RBP15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 PCDHB4Q9Y5E5 795 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 BZW2Q9Y6E2 419 aaKnown RBP15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 A0A087X0B3 334 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 LDHAP00338 332 aaKnown RBP15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 ACTN2P35609 894 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 PHKA2P46019 1235 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 OAZ1P54368 228 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 LACTBP83111 547 aaPredicted RBP15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 CYP27A1Q02318 531 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 RUSC1Q9BVN2 902 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 RPF1Q9H9Y2 349 aaKnown RBP15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 SPTLC3Q9NUV7 552 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 NUP188Q5SRE5 1749 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 PITPNM2Q9BZ72 1349 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 SPEF2Q9C093 1822 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 TRIM49P0CI25 452 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 TRIM49CP0CI26 452 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 EIF4A3P38919 411 aaKnown RBP15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 KSR1Q8IVT5 923 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 PPP1R13BQ96KQ4 1090 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 KCND2Q9NZV8 630 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 RBM43Q6ZSC3 357 aaKnown RBP15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 PANX2Q96RD6 677 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 RPS6KC1Q96S38 1066 aa15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.73■□□□□ 0.11
PDLIM2-201ENST00000265810 RSPH10B2B2RC85 870 aa15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 RSPH10BP0C881 870 aa15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 HOXD10P28358 340 aa15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 RPS6KA1Q15418 735 aa15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 C7orf31Q8N865 590 aa15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 NHEJ1Q9H9Q4 299 aaPredicted RBP15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 WNT7AO00755 349 aa15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 CEP104O60308 925 aa15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 PPP1R11O60927 126 aaPredicted RBP15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 TCF7P36402 384 aaPredicted RBP15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 PSMC6P62333 389 aa15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 ZNF568Q3ZCX4 644 aa15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 FBXO16Q8IX29 292 aaPredicted RBP15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 AGO4Q9HCK5 861 aaKnown RBP15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 IGKV6D-41A0A0C4DH26 115 aa15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 PLS3P13797 630 aa15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 SREBF2Q12772 1141 aa15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 SEL1L2Q5TEA6 688 aa15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 TRIM58Q8NG06 486 aa15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 C6orf222P0C671 652 aaPredicted RBP15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 GNAT1P11488 350 aa15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 CD44P16070 742 aaKnown RBP15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 PROCA1Q8NCQ7 364 aaPredicted RBP15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 EFCC1Q9HA90 598 aa15.72■□□□□ 0.11
PDLIM2-201ENST00000265810 TOGARAM1Q9Y4F4 1720 aa15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 ATF7P17544 494 aaPredicted RBP15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 VAMP7P51809 220 aa15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 IFFO1Q0D2I5 559 aa15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 PPIL2Q13356 520 aa15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 DLK2Q6UY11 383 aa15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 PLEKHH3Q7Z736 793 aa15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 PURBQ96QR8 312 aaKnown RBP15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 TIPINQ9BVW5 301 aa15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 ANKEF1Q9NU02 776 aa15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 ADAMTS1Q9UHI8 967 aa15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 TTC26A0AVF1 554 aa15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 TLR3O15455 904 aaKnown RBP15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 ZSCAN20P17040 1043 aaPredicted RBP15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 EMC2Q15006 297 aa15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 DAAM2Q86T65 1068 aa15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 KCTD17Q8N5Z5 321 aa15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 RDM1Q8NG50 284 aa15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 GMLQ99445 158 aa15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 CCDC94Q9BW85 323 aaPredicted RBP15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 SUCLA2Q9P2R7 463 aaPredicted RBP15.71■□□□□ 0.11
PDLIM2-201ENST00000265810 NDUFA10O95299 355 aa15.71■□□□□ 0.1
PDLIM2-201ENST00000265810 C2orf40Q9H1Z8 148 aa15.71■□□□□ 0.1
PDLIM2-201ENST00000265810 TAF1DQ9H5J8 278 aaPredicted RBP15.71■□□□□ 0.1
PDLIM2-201ENST00000265810 KIAA1586Q9HCI6 787 aa15.71■□□□□ 0.1
PDLIM2-201ENST00000265810 LIMA1Q9UHB6 759 aaKnown RBP15.71■□□□□ 0.1
PDLIM2-201ENST00000265810 AGTPBP1Q9UPW5 1226 aa15.71■□□□□ 0.1
PDLIM2-201ENST00000265810 GSTA5Q7RTV2 222 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 TEX2Q8IWB9 1127 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 UBL4BQ8N7F7 174 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 MTMR9Q96QG7 549 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 FUCA2Q9BTY2 467 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 ARFGAP3Q9NP61 516 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 DNAJC12Q9UKB3 198 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 CD58P19256 250 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 BPIFB4P59827 614 aa15.7■□□□□ 0.1
PDLIM2-201ENST00000265810 TNNC1P63316 161 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms