RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 TIGD1Q96MW7 591 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 TIPINQ9BVW5 301 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 GOLPH3LQ9H4A5 285 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 XPNPEP1Q9NQW7 623 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 SEPT9Q9UHD8 586 aaPredicted RBP15.9■□□□□ 0.14
SSBP1-201ENST00000265304 TUBE1Q9UJT0 475 aa15.9■□□□□ 0.14
SSBP1-201ENST00000265304 A0A1B0GVL5 298 aa15.89■□□□□ 0.13
SSBP1-201ENST00000265304 POLR2DO15514 142 aaKnown RBP15.89■□□□□ 0.13
SSBP1-201ENST00000265304 ACTN4O43707 911 aaKnown RBP15.89■□□□□ 0.13
SSBP1-201ENST00000265304 B4GALT4O60513 344 aa15.89■□□□□ 0.13
SSBP1-201ENST00000265304 PLA2G4BP0C869 781 aa15.89■□□□□ 0.13
SSBP1-201ENST00000265304 SOX10P56693 466 aa15.89■□□□□ 0.13
SSBP1-201ENST00000265304 RTP1P59025 263 aa15.89■□□□□ 0.13
SSBP1-201ENST00000265304 ZNF200P98182 395 aaPredicted RBP15.89■□□□□ 0.13
SSBP1-201ENST00000265304 TBC1D8BQ0IIM8 1120 aa15.89■□□□□ 0.13
SSBP1-201ENST00000265304 FAAP100Q0VG06 881 aa15.89■□□□□ 0.13
SSBP1-201ENST00000265304 PTGISQ16647 500 aa15.89■□□□□ 0.13
SSBP1-201ENST00000265304 PLA2G4FQ68DD2 849 aa15.89■□□□□ 0.13
SSBP1-201ENST00000265304 RINT1Q6NUQ1 792 aa15.89■□□□□ 0.13
SSBP1-201ENST00000265304 PADI6Q6TGC4 694 aa15.89■□□□□ 0.13
SSBP1-201ENST00000265304 KIAA0319LQ8IZA0 1049 aa15.89■□□□□ 0.13
SSBP1-201ENST00000265304 FSIP1Q8NA03 581 aa15.89■□□□□ 0.13
SSBP1-201ENST00000265304 MTRQ99707 1265 aa15.89■□□□□ 0.13
SSBP1-201ENST00000265304 TNMDQ9H2S6 317 aa15.89■□□□□ 0.13
SSBP1-201ENST00000265304 TBX21Q9UL17 535 aa15.89■□□□□ 0.13
SSBP1-201ENST00000265304 TET1Q8NFU7 2136 aa15.89■□□□□ 0.13
SSBP1-201ENST00000265304 A0A087WWV3 80 aa15.88■□□□□ 0.13
SSBP1-201ENST00000265304 GOLGA6L4A6NEF3 574 aa15.88■□□□□ 0.13
SSBP1-201ENST00000265304 DCDC2CA8MYV0 355 aa15.88■□□□□ 0.13
SSBP1-201ENST00000265304 KIAA0355O15063 1070 aa15.88■□□□□ 0.13
SSBP1-201ENST00000265304 PRPF40AO75400 957 aaKnown RBP15.88■□□□□ 0.13
SSBP1-201ENST00000265304 ARL2P36404 184 aa15.88■□□□□ 0.13
SSBP1-201ENST00000265304 SYKP43405 635 aa15.88■□□□□ 0.13
SSBP1-201ENST00000265304 CDC42EP1Q00587 391 aa15.88■□□□□ 0.13
SSBP1-201ENST00000265304 FAM160A1Q05DH4 1040 aa15.88■□□□□ 0.13
SSBP1-201ENST00000265304 POU5F1BQ06416 359 aa15.88■□□□□ 0.13
SSBP1-201ENST00000265304 MTERF2Q49AM1 385 aa15.88■□□□□ 0.13
SSBP1-201ENST00000265304 FAM26DQ5JW98 314 aa15.88■□□□□ 0.13
SSBP1-201ENST00000265304 FAM43BQ6ZT52 329 aaPredicted RBP15.88■□□□□ 0.13
SSBP1-201ENST00000265304 MCPH1Q8NEM0 835 aa15.88■□□□□ 0.13
SSBP1-201ENST00000265304 TRAPPC12Q8WVT3 735 aa15.88■□□□□ 0.13
SSBP1-201ENST00000265304 DHX38Q92620 1227 aaKnown RBP15.88■□□□□ 0.13
SSBP1-201ENST00000265304 TRPV6Q9H1D0 765 aa15.88■□□□□ 0.13
SSBP1-201ENST00000265304 TRMT13Q9NUP7 481 aaKnown RBP15.88■□□□□ 0.13
SSBP1-201ENST00000265304 SIP14410 1827 aa15.88■□□□□ 0.13
SSBP1-201ENST00000265304 ARHGEF35A5YM69 484 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 PITPNM1O00562 1244 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 ZNF202O95125 648 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 MYL1P05976 194 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 STAT6P42226 847 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 ATN1P54259 1190 aaPredicted RBP15.87■□□□□ 0.13
SSBP1-201ENST00000265304 MAPK7Q13164 816 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 TRIM60Q495X7 471 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 LONRF3Q496Y0 759 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 FAM47CQ5HY64 1035 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 IER5Q5VY09 327 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 SV2BQ7L1I2 683 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 DAW1Q8N136 415 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 RETREG2Q8NC44 543 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 CAGE1Q8TC20 777 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 SLC7A3Q8WY07 619 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 DNAJC19Q96DA6 116 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 NTPCRQ9BSD7 190 aaKnown RBP15.87■□□□□ 0.13
SSBP1-201ENST00000265304 HTATIP2Q9BUP3 242 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 PANK2Q9BZ23 570 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 C17orf75Q9HAS0 396 aa15.87■□□□□ 0.13
SSBP1-201ENST00000265304 TANC1Q9C0D5 1861 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 FRMD3A2A2Y4 597 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 TLR3O15455 904 aaKnown RBP15.86■□□□□ 0.13
SSBP1-201ENST00000265304 ASAP2O43150 1006 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 MCM4P33991 863 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 ZNF131P52739 623 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 MDM2Q00987 491 aaPredicted RBP15.86■□□□□ 0.13
SSBP1-201ENST00000265304 MCM6Q14566 821 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 EMC2Q15006 297 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 EFCAB12Q6NXP0 572 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 TRAF7Q6Q0C0 670 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 KRBA2Q6ZNG9 492 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 PDILTQ8N807 584 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 PPP1R13LQ8WUF5 828 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 TCP11Q8WWU5 503 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 WNT8BQ93098 351 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 PLIN2Q99541 437 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 C7orf25Q9BPX7 421 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 SH2D3AQ9BRG2 576 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 RUSC1Q9BVN2 902 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 LRRC27Q9C0I9 530 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 ATP6V0A4Q9HBG4 840 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 ODF2LQ9ULJ1 636 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 SQORQ9Y6N5 450 aa15.86■□□□□ 0.13
SSBP1-201ENST00000265304 MYMKA6NI61 221 aa15.85■□□□□ 0.13
SSBP1-201ENST00000265304 GOLGA6L22H0YM25 854 aa15.85■□□□□ 0.13
SSBP1-201ENST00000265304 CYP2C9P11712 490 aa15.85■□□□□ 0.13
SSBP1-201ENST00000265304 LIG1P18858 919 aa15.85■□□□□ 0.13
SSBP1-201ENST00000265304 TMOD1P28289 359 aa15.85■□□□□ 0.13
SSBP1-201ENST00000265304 DNM2P50570 870 aa15.85■□□□□ 0.13
SSBP1-201ENST00000265304 POLGP54098 1239 aaPredicted RBP15.85■□□□□ 0.13
SSBP1-201ENST00000265304 GIT2Q14161 759 aa15.85■□□□□ 0.13
SSBP1-201ENST00000265304 MXD4Q14582 209 aaPredicted RBP15.85■□□□□ 0.13
SSBP1-201ENST00000265304 ZRSR1Q15695 479 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms