RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 RAD51CO43502 376 aa21.5■■□□□ 1.03
CSPG5-201ENST00000264723 SLC18A3Q16572 532 aa21.5■■□□□ 1.03
CSPG5-201ENST00000264723 DAAM1Q9Y4D1 1078 aa21.5■■□□□ 1.03
CSPG5-201ENST00000264723 CEP83Q9Y592 693 aa21.5■■□□□ 1.03
CSPG5-201ENST00000264723 GLI1P08151 1106 aa21.49■■□□□ 1.03
CSPG5-201ENST00000264723 PDIA5Q14554 519 aa21.49■■□□□ 1.03
CSPG5-201ENST00000264723 FAM160B2Q86V87 743 aa21.49■■□□□ 1.03
CSPG5-201ENST00000264723 PROM2Q8N271 834 aa21.49■■□□□ 1.03
CSPG5-201ENST00000264723 C4orf32Q8N8J7 132 aa21.49■■□□□ 1.03
CSPG5-201ENST00000264723 BAIAP2L1Q9UHR4 511 aa21.49■■□□□ 1.03
CSPG5-201ENST00000264723 PCDHAC2Q9Y5I4 1007 aa21.49■■□□□ 1.03
CSPG5-201ENST00000264723 FBXW10Q5XX13 1052 aa21.49■■□□□ 1.03
CSPG5-201ENST00000264723 NAP1L3Q99457 506 aaPredicted RBP21.49■■□□□ 1.03
CSPG5-201ENST00000264723 MRC1P22897 1456 aa21.49■■□□□ 1.03
CSPG5-201ENST00000264723 A0A087WUV0 522 aaPredicted RBP21.49■■□□□ 1.03
CSPG5-201ENST00000264723 SART1O43290 800 aaKnown RBP21.49■■□□□ 1.03
CSPG5-201ENST00000264723 UCHL3P15374 230 aa21.49■■□□□ 1.03
CSPG5-201ENST00000264723 MKRN3Q13064 507 aaKnown RBP21.49■■□□□ 1.03
CSPG5-201ENST00000264723 RNF207Q6ZRF8 634 aa21.49■■□□□ 1.03
CSPG5-201ENST00000264723 EIF2AK1Q9BQI3 630 aaKnown RBP21.49■■□□□ 1.03
CSPG5-201ENST00000264723 TRPC6Q9Y210 931 aa21.49■■□□□ 1.03
CSPG5-201ENST00000264723 GCLMP48507 274 aa21.48■■□□□ 1.03
CSPG5-201ENST00000264723 CASP4P49662 377 aa21.48■■□□□ 1.03
CSPG5-201ENST00000264723 PSMC6P62333 389 aa21.48■■□□□ 1.03
CSPG5-201ENST00000264723 CD2APQ9Y5K6 639 aa21.48■■□□□ 1.03
CSPG5-201ENST00000264723 NKRFO15226 690 aaKnown RBP eCLIP21.48■■□□□ 1.03
CSPG5-201ENST00000264723 TADA2BQ86TJ2 420 aa21.48■■□□□ 1.03
CSPG5-201ENST00000264723 RNF10Q8N5U6 811 aaKnown RBP21.48■■□□□ 1.03
CSPG5-201ENST00000264723 VTI1AQ96AJ9 217 aa21.48■■□□□ 1.03
CSPG5-201ENST00000264723 GAP43P17677 238 aa21.48■■□□□ 1.03
CSPG5-201ENST00000264723 MTMR1Q13613 665 aa21.48■■□□□ 1.03
CSPG5-201ENST00000264723 DRAP1Q14919 205 aaPredicted RBP21.48■■□□□ 1.03
CSPG5-201ENST00000264723 EFCAB13Q8IY85 973 aa21.48■■□□□ 1.03
CSPG5-201ENST00000264723 FAM20AQ96MK3 541 aa21.48■■□□□ 1.03
CSPG5-201ENST00000264723 MLXIPLQ9NP71 852 aa21.48■■□□□ 1.03
CSPG5-201ENST00000264723 KMT5AQ9NQR1 393 aa21.48■■□□□ 1.03
CSPG5-201ENST00000264723 CTNND1O60716 968 aaKnown RBP21.47■■□□□ 1.03
CSPG5-201ENST00000264723 FERP16591 822 aa21.47■■□□□ 1.03
CSPG5-201ENST00000264723 IWS1Q96ST2 819 aa21.47■■□□□ 1.03
CSPG5-201ENST00000264723 PPP1R16BQ96T49 567 aa21.47■■□□□ 1.03
CSPG5-201ENST00000264723 RAB17Q9H0T7 212 aa21.47■■□□□ 1.03
CSPG5-201ENST00000264723 BZW2Q9Y6E2 419 aaKnown RBP21.47■■□□□ 1.03
CSPG5-201ENST00000264723 KDM3BQ7LBC6 1761 aa21.47■■□□□ 1.03
CSPG5-201ENST00000264723 DCAF8L1A6NGE4 600 aa21.47■■□□□ 1.03
CSPG5-201ENST00000264723 POLRMTO00411 1230 aaKnown RBP21.47■■□□□ 1.03
CSPG5-201ENST00000264723 MED24O75448 989 aa21.47■■□□□ 1.03
CSPG5-201ENST00000264723 FAM153BP0C7A2 387 aa21.47■■□□□ 1.03
CSPG5-201ENST00000264723 FAM153CQ494X1 144 aa21.47■■□□□ 1.03
CSPG5-201ENST00000264723 CACNA2D3Q8IZS8 1091 aa21.47■■□□□ 1.03
CSPG5-201ENST00000264723 CEP63Q96MT8 703 aa21.47■■□□□ 1.03
CSPG5-201ENST00000264723 TRIM51Q9BSJ1 452 aa21.47■■□□□ 1.03
CSPG5-201ENST00000264723 FAM153AQ9UHL3 310 aa21.47■■□□□ 1.03
CSPG5-201ENST00000264723 ATRNO75882 1429 aa21.47■■□□□ 1.03
CSPG5-201ENST00000264723 TTI1O43156 1089 aa21.47■■□□□ 1.03
CSPG5-201ENST00000264723 TMOD1P28289 359 aa21.47■■□□□ 1.03
CSPG5-201ENST00000264723 DCUN1D2Q6PH85 259 aa21.47■■□□□ 1.03
CSPG5-201ENST00000264723 ZNF668Q96K58 619 aaPredicted RBP21.47■■□□□ 1.03
CSPG5-201ENST00000264723 FBXL5Q9UKA1 691 aa21.47■■□□□ 1.03
CSPG5-201ENST00000264723 NOC2LQ9Y3T9 749 aaKnown RBP21.47■■□□□ 1.03
CSPG5-201ENST00000264723 MAGOHP61326 146 aaKnown RBP21.46■■□□□ 1.03
CSPG5-201ENST00000264723 CYP2W1Q8TAV3 490 aa21.46■■□□□ 1.03
CSPG5-201ENST00000264723 KIF1AQ12756 1690 aa21.46■■□□□ 1.03
CSPG5-201ENST00000264723 USP11P51784 963 aa21.46■■□□□ 1.03
CSPG5-201ENST00000264723 MIIPQ5JXC2 388 aa21.46■■□□□ 1.03
CSPG5-201ENST00000264723 PADI6Q6TGC4 694 aa21.46■■□□□ 1.03
CSPG5-201ENST00000264723 CREG2Q8IUH2 290 aa21.46■■□□□ 1.03
CSPG5-201ENST00000264723 RNF14Q9UBS8 474 aa21.46■■□□□ 1.03
CSPG5-201ENST00000264723 DCPSQ96C86 337 aaKnown RBP21.46■■□□□ 1.03
CSPG5-201ENST00000264723 MARK3P27448 753 aa21.45■■□□□ 1.03
CSPG5-201ENST00000264723 AMPD2Q01433 879 aa21.45■■□□□ 1.03
CSPG5-201ENST00000264723 E2F5Q15329 346 aa21.45■■□□□ 1.03
CSPG5-201ENST00000264723 ZKSCAN8Q15776 578 aaPredicted RBP21.45■■□□□ 1.03
CSPG5-201ENST00000264723 CATSPER3Q86XQ3 398 aa21.45■■□□□ 1.03
CSPG5-201ENST00000264723 FMNL3Q8IVF7 1028 aa21.45■■□□□ 1.03
CSPG5-201ENST00000264723 NYAP2Q9P242 653 aa21.45■■□□□ 1.03
CSPG5-201ENST00000264723 ZNF70Q9UC06 446 aaPredicted RBP21.45■■□□□ 1.03
CSPG5-201ENST00000264723 ZNF263O14978 683 aa21.45■■□□□ 1.02
CSPG5-201ENST00000264723 NEBLO76041 1014 aa21.45■■□□□ 1.02
CSPG5-201ENST00000264723 MTMR3Q13615 1198 aa21.45■■□□□ 1.02
CSPG5-201ENST00000264723 PRPF38AQ8NAV1 312 aaKnown RBP21.45■■□□□ 1.02
CSPG5-201ENST00000264723 TSEN2Q8NCE0 465 aaKnown RBP21.45■■□□□ 1.02
CSPG5-201ENST00000264723 DAGLBQ8NCG7 672 aa21.45■■□□□ 1.02
CSPG5-201ENST00000264723 FMO2Q99518 471 aa21.45■■□□□ 1.02
CSPG5-201ENST00000264723 TLR10Q9BXR5 811 aa21.45■■□□□ 1.02
CSPG5-201ENST00000264723 VIPAS39Q9H9C1 493 aa21.45■■□□□ 1.02
CSPG5-201ENST00000264723 TBK1Q9UHD2 729 aa21.45■■□□□ 1.02
CSPG5-201ENST00000264723 HERC5Q9UII4 1024 aaKnown RBP21.45■■□□□ 1.02
CSPG5-201ENST00000264723 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.45■■□□□ 1.02
CSPG5-201ENST00000264723 SLC16A4O15374 487 aa21.45■■□□□ 1.02
CSPG5-201ENST00000264723 CYP11B2P19099 503 aa21.45■■□□□ 1.02
CSPG5-201ENST00000264723 OSTNP61366 133 aa21.45■■□□□ 1.02
CSPG5-201ENST00000264723 CEP55Q53EZ4 464 aa21.45■■□□□ 1.02
CSPG5-201ENST00000264723 PPP1R18Q6NYC8 613 aa21.45■■□□□ 1.02
CSPG5-201ENST00000264723 LXNQ9BS40 222 aa21.45■■□□□ 1.02
CSPG5-201ENST00000264723 MMTAG2Q9BU76 263 aaKnown RBP21.45■■□□□ 1.02
CSPG5-201ENST00000264723 SNRNP48Q6IEG0 339 aaKnown RBP21.45■■□□□ 1.02
CSPG5-201ENST00000264723 WHAMMQ8TF30 809 aa21.45■■□□□ 1.02
CSPG5-201ENST00000264723 MUM1L1Q5H9M0 696 aa21.44■■□□□ 1.02
CSPG5-201ENST00000264723 SAMD7Q7Z3H4 446 aa21.44■■□□□ 1.02
CSPG5-201ENST00000264723 ATP6V0A1Q93050 837 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms