RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 MT-ND3P03897 115 aa16.21■□□□□ 0.19
CASC3-201ENST00000264645 UBE2SQ16763 222 aa16.21■□□□□ 0.19
CASC3-201ENST00000264645 GLT8D2Q9H1C3 349 aa16.21■□□□□ 0.19
CASC3-201ENST00000264645 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.21■□□□□ 0.19
CASC3-201ENST00000264645 ERVV-2B6SEH9 535 aa16.21■□□□□ 0.18
CASC3-201ENST00000264645 SGK1O00141 431 aa16.21■□□□□ 0.18
CASC3-201ENST00000264645 CFBP00751 764 aa16.21■□□□□ 0.18
CASC3-201ENST00000264645 USP11P51784 963 aa16.21■□□□□ 0.18
CASC3-201ENST00000264645 YTHDF3Q7Z739 585 aaKnown RBP16.21■□□□□ 0.18
CASC3-201ENST00000264645 TEX9Q8N6V9 391 aa16.21■□□□□ 0.18
CASC3-201ENST00000264645 FERMT1Q9BQL6 677 aa16.21■□□□□ 0.18
CASC3-201ENST00000264645 RABGAP1Q9Y3P9 1069 aa16.21■□□□□ 0.18
CASC3-201ENST00000264645 MDM2Q00987 491 aaPredicted RBP16.2■□□□□ 0.18
CASC3-201ENST00000264645 C1orf146Q5VVC0 180 aa16.2■□□□□ 0.18
CASC3-201ENST00000264645 BARGINQ6ZT62 677 aa16.2■□□□□ 0.18
CASC3-201ENST00000264645 C1orf54Q8WWF1 131 aa16.2■□□□□ 0.18
CASC3-201ENST00000264645 ERP44Q9BS26 406 aa16.2■□□□□ 0.18
CASC3-201ENST00000264645 PCIF1Q9H4Z3 704 aa16.2■□□□□ 0.18
CASC3-201ENST00000264645 NRXN1Q9ULB1 1477 aa16.2■□□□□ 0.18
CASC3-201ENST00000264645 CPS1P31327 1500 aa16.2■□□□□ 0.18
CASC3-201ENST00000264645 RCCD1A6NED2 376 aa16.2■□□□□ 0.18
CASC3-201ENST00000264645 RNF225M0QZC1 329 aaPredicted RBP16.2■□□□□ 0.18
CASC3-201ENST00000264645 DLATP10515 647 aaKnown RBP16.2■□□□□ 0.18
CASC3-201ENST00000264645 GALCP54803 685 aa16.2■□□□□ 0.18
CASC3-201ENST00000264645 TPD52P55327 224 aaPredicted RBP16.2■□□□□ 0.18
CASC3-201ENST00000264645 ELF3P78545 371 aaPredicted RBP16.2■□□□□ 0.18
CASC3-201ENST00000264645 DHX34Q14147 1143 aaKnown RBP16.2■□□□□ 0.18
CASC3-201ENST00000264645 LRRC36Q1X8D7 754 aa16.2■□□□□ 0.18
CASC3-201ENST00000264645 AGGF1Q8N302 714 aaeCLIP16.2■□□□□ 0.187e-8■■■■□ 23.7
CASC3-201ENST00000264645 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.2■□□□□ 0.18
CASC3-201ENST00000264645 GRAMD1AQ96CP6 724 aa16.2■□□□□ 0.18
CASC3-201ENST00000264645 PACSIN1Q9BY11 444 aa16.2■□□□□ 0.18
CASC3-201ENST00000264645 TTC7AQ9ULT0 858 aaPredicted RBP16.2■□□□□ 0.18
CASC3-201ENST00000264645 DIS3Q9Y2L1 958 aaKnown RBP16.2■□□□□ 0.18
CASC3-201ENST00000264645 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.2■□□□□ 0.18
CASC3-201ENST00000264645 TRAPPC3O43617 180 aa16.2■□□□□ 0.18
CASC3-201ENST00000264645 UBTFL6P0CB48 400 aaPredicted RBP16.2■□□□□ 0.18
CASC3-201ENST00000264645 TTI2Q6NXR4 508 aa16.2■□□□□ 0.18
CASC3-201ENST00000264645 JAMLQ86YT9 394 aa16.2■□□□□ 0.18
CASC3-201ENST00000264645 FAM129AQ9BZQ8 928 aa16.2■□□□□ 0.18
CASC3-201ENST00000264645 ALG13Q9NP73 1137 aaKnown RBP16.2■□□□□ 0.18
CASC3-201ENST00000264645 ASAP1Q9ULH1 1129 aa16.2■□□□□ 0.18
CASC3-201ENST00000264645 NSFP46459 744 aaKnown RBP16.19■□□□□ 0.18
CASC3-201ENST00000264645 KCNJ1P48048 391 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 ZNF844Q08AG5 666 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 LAMB3Q13751 1172 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 KLHDC7AQ5VTJ3 777 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 RNF207Q6ZRF8 634 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 TRIM59Q8IWR1 403 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 MORC4Q8TE76 937 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 RFFLQ8WZ73 363 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 SMYD3Q9H7B4 428 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 IFT122Q9HBG6 1241 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 EPB41L4AQ9HCS5 686 aaPredicted RBP16.19■□□□□ 0.18
CASC3-201ENST00000264645 K7ENM7 598 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 TARSP26639 723 aaKnown RBP16.19■□□□□ 0.18
CASC3-201ENST00000264645 PTK2Q05397 1052 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 BSPRYQ5W0U4 402 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 TPTE2Q6XPS3 522 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 DNAAF5Q86Y56 855 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 NME8Q8N427 588 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 C9orf72Q96LT7 481 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 MTA3Q9BTC8 594 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 PTPRMP28827 1452 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 BBS9Q3SYG4 887 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 EPS8L3Q8TE67 593 aaKnown RBP16.19■□□□□ 0.18
CASC3-201ENST00000264645 PRCCQ92733 491 aaPredicted RBP16.19■□□□□ 0.18
CASC3-201ENST00000264645 PABPC3Q9H361 631 aaKnown RBP16.19■□□□□ 0.18
CASC3-201ENST00000264645 ZNF711Q9Y462 761 aa16.19■□□□□ 0.18
CASC3-201ENST00000264645 EPHB1P54762 984 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 ERVK-9P63128 1117 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 DRAP1Q14919 205 aaPredicted RBP16.18■□□□□ 0.18
CASC3-201ENST00000264645 KCTD19Q17RG1 926 aaPredicted RBP16.18■□□□□ 0.18
CASC3-201ENST00000264645 PPP4R1Q8TF05 950 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 PIK3R5Q8WYR1 880 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 RAD54LQ92698 747 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 PCDHA1Q9Y5I3 950 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 TNNI1P19237 187 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 SLC9A1P19634 815 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 DEUP1Q05D60 604 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 MKRN3Q13064 507 aaKnown RBP16.18■□□□□ 0.18
CASC3-201ENST00000264645 KYNUQ16719 465 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 TTBK2Q6IQ55 1244 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 AGAP11Q8TF27 550 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 BHMT2Q9H2M3 363 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 NDE1Q9NXR1 346 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 GAS7O60861 476 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 GSTA1P08263 222 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 SLC16A2P36021 539 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 DDR1Q08345 913 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 THEMIS2Q5TEJ8 643 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 SLFN12Q8IYM2 578 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 TMEM260Q9NX78 707 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
CASC3-201ENST00000264645 UTYO14607 1347 aa16.18■□□□□ 0.18
CASC3-201ENST00000264645 FTLP02792 175 aaPredicted RBP16.17■□□□□ 0.18
CASC3-201ENST00000264645 CD19P15391 556 aa16.17■□□□□ 0.18
CASC3-201ENST00000264645 ARFIP2P53365 341 aa16.17■□□□□ 0.18
CASC3-201ENST00000264645 DNAJC3Q13217 504 aa16.17■□□□□ 0.18
CASC3-201ENST00000264645 PPP2R5DQ14738 602 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms