RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 BCRP11274 1271 aa17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 KCNJ1P48048 391 aa17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 UAP1Q16222 522 aaPredicted RBP17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 KAZNQ674X7 775 aa17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 SRCAPQ6ZRS2 3230 aa17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 NAP1L4Q99733 375 aaKnown RBP17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 ELAC2Q9BQ52 826 aaKnown RBP17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 DDX4Q9NQI0 724 aaKnown RBP17.55■□□□□ 0.4
PDZRN3-201ENST00000263666 EVI5O60447 810 aa17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 FERP16591 822 aa17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 KCNMA1Q12791 1236 aa17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 EHMT1Q9H9B1 1298 aa17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 ZNF408Q9H9D4 720 aa17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 PARVGQ9HBI0 331 aa17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 ARHGEF10LQ9HCE6 1279 aa17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 INTS9Q9NV88 658 aaKnown RBP17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 IFNB1P01574 187 aa17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 MAP2K2P36507 400 aa17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 NAB2Q15742 525 aa17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 TTMPQ5BVD1 217 aa17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 DALRD3Q5D0E6 543 aaKnown RBP17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 CYP4F22Q6NT55 531 aa17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 HIBCHQ6NVY1 386 aaPredicted RBP17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 HOOK3Q86VS8 718 aa17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 GRID2IPA4D2P6 1211 aa17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 MTMR3Q13615 1198 aa17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 CEP63Q96MT8 703 aa17.54■□□□□ 0.4
PDZRN3-201ENST00000263666 SSU72P8A0A1W2PR75 194 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 FGFR4P22455 802 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 PDIA5Q14554 519 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 COG2Q14746 738 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 SYDE2Q5VT97 1194 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 ZFPM1Q8IX07 1006 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 USP38Q8NB14 1042 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 ZNF473Q8WTR7 871 aaKnown RBP17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 HEMGNQ9BXL5 484 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 ZNF277Q9NRM2 450 aaPredicted RBP17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 A0A1W2PQJ5 194 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 EZRP15311 586 aaKnown RBP17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 GRM1Q13255 1194 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 MMS22LQ6ZRQ5 1243 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 SP8Q8IXZ3 490 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 ZNF653Q96CK0 615 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 NAP1L3Q99457 506 aaPredicted RBP17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 EIF2AK1Q9BQI3 630 aaKnown RBP17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 PNMA2Q9UL42 364 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 GPR75-ASB3A0A0A6YYF3 556 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 AKAP3O75969 853 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 CRKP46108 304 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 R3HDM1Q15032 1099 aaKnown RBP17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 GPR162Q16538 588 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 C2CD6Q53TS8 623 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 RUSC1Q9BVN2 902 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 PIM2Q9P1W9 311 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 LAMA4Q16363 1823 aa17.53■□□□□ 0.4
PDZRN3-201ENST00000263666 POLR2MP0CAP2 368 aa17.52■□□□□ 0.4
PDZRN3-201ENST00000263666 XKR9Q5GH70 373 aa17.52■□□□□ 0.4
PDZRN3-201ENST00000263666 DAGLBQ8NCG7 672 aa17.52■□□□□ 0.4
PDZRN3-201ENST00000263666 RNF14Q9UBS8 474 aa17.52■□□□□ 0.4
PDZRN3-201ENST00000263666 NAGPAQ9UK23 515 aa17.52■□□□□ 0.4
PDZRN3-201ENST00000263666 HSD17B3P37058 310 aa17.52■□□□□ 0.4
PDZRN3-201ENST00000263666 FXR2P51116 673 aaKnown RBP eCLIP17.52■□□□□ 0.4
PDZRN3-201ENST00000263666 MTM1Q13496 603 aa17.52■□□□□ 0.4
PDZRN3-201ENST00000263666 SLC15A2Q16348 729 aa17.52■□□□□ 0.4
PDZRN3-201ENST00000263666 EPC2Q52LR7 807 aa17.52■□□□□ 0.4
PDZRN3-201ENST00000263666 AENQ8WTP8 325 aaKnown RBP17.52■□□□□ 0.4
PDZRN3-201ENST00000263666 PBKQ96KB5 322 aa17.52■□□□□ 0.4
PDZRN3-201ENST00000263666 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.52■□□□□ 0.4
PDZRN3-201ENST00000263666 KCNQ5Q9NR82 932 aa17.52■□□□□ 0.4
PDZRN3-201ENST00000263666 BZW2Q9Y6E2 419 aaKnown RBP17.52■□□□□ 0.4
PDZRN3-201ENST00000263666 KCPQ6ZWJ8 1503 aa17.52■□□□□ 0.4
PDZRN3-201ENST00000263666 CDC42EP5Q6NZY7 148 aa17.52■□□□□ 0.39
PDZRN3-201ENST00000263666 TBC1D1Q86TI0 1168 aaPredicted RBP17.52■□□□□ 0.39
PDZRN3-201ENST00000263666 SLC35G2Q8TBE7 412 aa17.52■□□□□ 0.39
PDZRN3-201ENST00000263666 CC2D2BQ6DHV5 1058 aa17.52■□□□□ 0.39
PDZRN3-201ENST00000263666 ZNF365Q70YC5 407 aa17.52■□□□□ 0.39
PDZRN3-201ENST00000263666 CCDC91Q7Z6B0 441 aa17.52■□□□□ 0.39
PDZRN3-201ENST00000263666 AZI2Q9H6S1 392 aa17.52■□□□□ 0.39
PDZRN3-201ENST00000263666 LRRC4BQ9NT99 713 aa17.52■□□□□ 0.39
PDZRN3-201ENST00000263666 HMGB1P1B2RPK0 211 aaPredicted RBP17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 MDH1P40925 334 aaKnown RBP17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 LRRC55Q6ZSA7 311 aa17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 PODNQ7Z5L7 613 aa17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 SAAL1Q96ER3 474 aa17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 BTBD6Q96KE9 485 aa17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 GLT8D2Q9H1C3 349 aa17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 TUBGCP6Q96RT7 1819 aa17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 RASSF10A6NK89 507 aa17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 FTLP02792 175 aaPredicted RBP17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 ADCY8P40145 1251 aa17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 CRAMP1Q96RY5 1269 aa17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 LBHD1Q9BQE6 289 aaPredicted RBP17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 PICK1Q9NRD5 415 aa17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 ECE2O60344 883 aa17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 ERVK-9P63128 1117 aa17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 LMBRD2Q68DH5 695 aaPredicted RBP17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 SLC30A5Q8TAD4 765 aa17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 BAP1Q92560 729 aa17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 NSRP1Q9H0G5 558 aaKnown RBP17.51■□□□□ 0.39
PDZRN3-201ENST00000263666 ABCB11O95342 1321 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms