RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 DOCK5Q9H7D0 1870 aa14.89□□□□□ -0.03
VMP1-201ENST00000262291 LOC102724159A0A0B4J2E5 919 aa14.89□□□□□ -0.03
VMP1-201ENST00000262291 A0A1W2PQJ5 194 aa14.89□□□□□ -0.03
VMP1-201ENST00000262291 AKR1B10O60218 316 aa14.89□□□□□ -0.03
VMP1-201ENST00000262291 TRIM49P0CI25 452 aa14.89□□□□□ -0.03
VMP1-201ENST00000262291 TRIM49CP0CI26 452 aa14.89□□□□□ -0.03
VMP1-201ENST00000262291 H2AFXP16104 143 aaPredicted RBP14.89□□□□□ -0.03
VMP1-201ENST00000262291 CYLC1P35663 651 aaPredicted RBP14.89□□□□□ -0.03
VMP1-201ENST00000262291 GFPT1Q06210 699 aaPredicted RBP14.89□□□□□ -0.03
VMP1-201ENST00000262291 PWP2Q15269 919 aaKnown RBP14.89□□□□□ -0.03
VMP1-201ENST00000262291 XKR9Q5GH70 373 aa14.89□□□□□ -0.03
VMP1-201ENST00000262291 VSIG10LQ86VR7 867 aa14.89□□□□□ -0.03
VMP1-201ENST00000262291 DRC1Q96MC2 740 aa14.89□□□□□ -0.03
VMP1-201ENST00000262291 TEX13BQ9BXU2 312 aa14.89□□□□□ -0.03
VMP1-201ENST00000262291 OLFML3Q9NRN5 406 aa14.89□□□□□ -0.03
VMP1-201ENST00000262291 PLAGL2Q9UPG8 496 aa14.89□□□□□ -0.03
VMP1-201ENST00000262291 PCNTO95613 3336 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 MYO1CO00159 1063 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 TLR2O60603 784 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 GNA14O95837 355 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 TUBB4AP04350 444 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 CCND2P30279 289 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 FIGNQ5HY92 759 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 C12orf42Q96LP6 360 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 SYT17Q9BSW7 474 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 AJAP1Q9UKB5 411 aaPredicted RBP14.88□□□□□ -0.03
VMP1-201ENST00000262291 PARP14Q460N5 1801 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 MYH11P35749 1972 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 IRF6O14896 467 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 XRCC5P13010 732 aaKnown RBP14.88□□□□□ -0.03
VMP1-201ENST00000262291 KIF11P52732 1056 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 GHRHRQ02643 423 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 FAM102BQ5T8I3 360 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 PPP4R3CPQ6ZMV5 832 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 NLRX1Q86UT6 975 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 ZC3H3Q8IXZ2 948 aaKnown RBP14.88□□□□□ -0.03
VMP1-201ENST00000262291 FAM133AQ8N9E0 248 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 MLXIPQ9HAP2 919 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 ADARB2Q9NS39 739 aaKnown RBP14.88□□□□□ -0.03
VMP1-201ENST00000262291 BTBD7Q9P203 1132 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 GABBR1Q9UBS5 961 aa14.88□□□□□ -0.03
VMP1-201ENST00000262291 CTAGE9A4FU28 777 aa14.87□□□□□ -0.03
VMP1-201ENST00000262291 SLC16A4O15374 487 aa14.87□□□□□ -0.03
VMP1-201ENST00000262291 SRGAP2O75044 1071 aa14.87□□□□□ -0.03
VMP1-201ENST00000262291 SBF1O95248 1867 aa14.87□□□□□ -0.03
VMP1-201ENST00000262291 EPB41P11171 864 aaKnown RBP14.87□□□□□ -0.03
VMP1-201ENST00000262291 BMT2Q1RMZ1 405 aa14.87□□□□□ -0.03
VMP1-201ENST00000262291 EEPD1Q7L9B9 569 aa14.87□□□□□ -0.03
VMP1-201ENST00000262291 NIPA1Q7RTP0 329 aa14.87□□□□□ -0.03
VMP1-201ENST00000262291 ACAD9Q9H845 621 aa14.87□□□□□ -0.03
VMP1-201ENST00000262291 TBC1D22BQ9NU19 505 aa14.87□□□□□ -0.03
VMP1-201ENST00000262291 ADAMTS5Q9UNA0 930 aa14.87□□□□□ -0.03
VMP1-201ENST00000262291 CSADQ9Y600 493 aa14.87□□□□□ -0.03
VMP1-201ENST00000262291 TADA3O75528 432 aa14.87□□□□□ -0.03
VMP1-201ENST00000262291 IPO7O95373 1038 aaKnown RBP14.87□□□□□ -0.03
VMP1-201ENST00000262291 AFPP02771 609 aaKnown RBP14.87□□□□□ -0.03
VMP1-201ENST00000262291 PEX3P56589 373 aa14.87□□□□□ -0.03
VMP1-201ENST00000262291 FAM186BQ8IYM0 893 aa14.87□□□□□ -0.03
VMP1-201ENST00000262291 ANKRD35Q8N283 1001 aa14.87□□□□□ -0.03
VMP1-201ENST00000262291 NSUN6Q8TEA1 469 aaKnown RBP14.87□□□□□ -0.03
VMP1-201ENST00000262291 UBXN4Q92575 508 aa14.87□□□□□ -0.03
VMP1-201ENST00000262291 AGPAT3Q9NRZ7 376 aa14.87□□□□□ -0.03
VMP1-201ENST00000262291 NOP2P46087 812 aaKnown RBP14.86□□□□□ -0.03
VMP1-201ENST00000262291 ZNF131P52739 623 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 SPA17Q15506 151 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 EAPPQ56P03 285 aaPredicted RBP14.86□□□□□ -0.03
VMP1-201ENST00000262291 SWSAP1Q6NVH7 229 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 SEPT14Q6ZU15 432 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.86□□□□□ -0.03
VMP1-201ENST00000262291 WDR64B1ANS9 1081 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 EIF3CLB5ME19 914 aaKnown RBP14.86□□□□□ -0.03
VMP1-201ENST00000262291 ATP1A1P05023 1023 aaKnown RBP14.86□□□□□ -0.03
VMP1-201ENST00000262291 GUCY2CP25092 1073 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 RPL13P26373 211 aaKnown RBP14.86□□□□□ -0.03
VMP1-201ENST00000262291 GTF2A1P52655 376 aaPredicted RBP14.86□□□□□ -0.03
VMP1-201ENST00000262291 MARSP56192 900 aaKnown RBP14.86□□□□□ -0.03
VMP1-201ENST00000262291 KRT83P78385 493 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 SP2Q02086 613 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 ZSCAN26Q16670 478 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 SFMBT2Q5VUG0 894 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 FRMD5Q7Z6J6 570 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 SLC35C1Q96A29 364 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 EIF3CQ99613 913 aaKnown RBP14.86□□□□□ -0.03
VMP1-201ENST00000262291 NAPGQ99747 312 aaPredicted RBP14.86□□□□□ -0.03
VMP1-201ENST00000262291 IFIH1Q9BYX4 1025 aaKnown RBP14.86□□□□□ -0.03
VMP1-201ENST00000262291 HOXC10Q9NYD6 342 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 PCDHA13Q9Y5I0 950 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 KIAA1217Q5T5P2 1943 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 PPP1R12BO60237 982 aaPredicted RBP14.86□□□□□ -0.03
VMP1-201ENST00000262291 ZNF862O60290 1169 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 NOL9Q5SY16 702 aaKnown RBP14.86□□□□□ -0.03
VMP1-201ENST00000262291 HGSNATQ68CP4 663 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 FOXR2Q6PJQ5 311 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 ANO5Q75V66 913 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 NCAPG2Q86XI2 1143 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 GBP3Q9H0R5 595 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 GANQ9H2C0 597 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 CEP72Q9P209 647 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 USP20Q9Y2K6 914 aa14.86□□□□□ -0.03
VMP1-201ENST00000262291 GOLGA8IPA6NC78 632 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms