RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 LRRC41Q15345 812 aa30.52■■■□□ 2.48
SMARCD3-201ENST00000262188 KIAA0753Q2KHM9 967 aa30.52■■■□□ 2.48
SMARCD3-201ENST00000262188 CEP89Q96ST8 783 aa30.52■■■□□ 2.48
SMARCD3-201ENST00000262188 GPRC5CQ9NQ84 441 aa30.52■■■□□ 2.48
SMARCD3-201ENST00000262188 ZNF215Q9UL58 517 aaPredicted RBP30.52■■■□□ 2.48
SMARCD3-201ENST00000262188 FRMPD3Q5JV73 1810 aa30.52■■■□□ 2.48
SMARCD3-201ENST00000262188 KLRC4O43908 158 aa30.52■■■□□ 2.48
SMARCD3-201ENST00000262188 ASGR1P07306 291 aa30.52■■■□□ 2.48
SMARCD3-201ENST00000262188 IDEP14735 1019 aa30.52■■■□□ 2.48
SMARCD3-201ENST00000262188 CCSAPQ6IQ19 270 aaPredicted RBP30.52■■■□□ 2.48
SMARCD3-201ENST00000262188 NIFKQ9BYG3 293 aaKnown RBP30.52■■■□□ 2.48
SMARCD3-201ENST00000262188 PAK6Q9NQU5 681 aaPredicted RBP30.52■■■□□ 2.48
SMARCD3-201ENST00000262188 HOOK1Q9UJC3 728 aaKnown RBP30.52■■■□□ 2.48
SMARCD3-201ENST00000262188 INSRRP14616 1297 aa30.51■■■□□ 2.47
SMARCD3-201ENST00000262188 AMPD3Q01432 767 aa30.51■■■□□ 2.47
SMARCD3-201ENST00000262188 GIT2Q14161 759 aa30.51■■■□□ 2.47
SMARCD3-201ENST00000262188 ELOA2Q8IYF1 753 aaPredicted RBP30.51■■■□□ 2.47
SMARCD3-201ENST00000262188 KCTD17Q8N5Z5 321 aa30.51■■■□□ 2.47
SMARCD3-201ENST00000262188 SMARCE1Q969G3 411 aa30.51■■■□□ 2.47
SMARCD3-201ENST00000262188 ZHX3Q9H4I2 956 aa30.51■■■□□ 2.47
SMARCD3-201ENST00000262188 SLC26A2P50443 739 aa30.5■■■□□ 2.47
SMARCD3-201ENST00000262188 MFSD10Q14728 455 aa30.5■■■□□ 2.47
SMARCD3-201ENST00000262188 TARBP2Q15633 366 aaKnown RBP30.5■■■□□ 2.47
SMARCD3-201ENST00000262188 CCDC34Q96HJ3 373 aa30.5■■■□□ 2.47
SMARCD3-201ENST00000262188 ZNF333Q96JL9 665 aa30.5■■■□□ 2.47
SMARCD3-201ENST00000262188 FAM167AQ96KS9 214 aa30.5■■■□□ 2.47
SMARCD3-201ENST00000262188 RPN1P04843 607 aaKnown RBP30.5■■■□□ 2.47
SMARCD3-201ENST00000262188 PSEN2P49810 448 aa30.5■■■□□ 2.47
SMARCD3-201ENST00000262188 NKX3-2P78367 333 aa30.5■■■□□ 2.47
SMARCD3-201ENST00000262188 MAN1B1Q9UKM7 699 aa30.5■■■□□ 2.47
SMARCD3-201ENST00000262188 MSCO60682 206 aa30.49■■■□□ 2.47
SMARCD3-201ENST00000262188 XPNPEP1Q9NQW7 623 aa30.49■■■□□ 2.47
SMARCD3-201ENST00000262188 TUBE1Q9UJT0 475 aa30.49■■■□□ 2.47
SMARCD3-201ENST00000262188 RBAK-RBAKDNI3L0D1 243 aa30.48■■■□□ 2.47
SMARCD3-201ENST00000262188 HBP1O60381 514 aa30.48■■■□□ 2.47
SMARCD3-201ENST00000262188 SARSP49591 514 aaKnown RBP30.48■■■□□ 2.47
SMARCD3-201ENST00000262188 HIC1Q14526 733 aa30.48■■■□□ 2.47
SMARCD3-201ENST00000262188 KMT5BQ4FZB7 885 aa30.48■■■□□ 2.47
SMARCD3-201ENST00000262188 SPATA20Q8TB22 786 aa30.48■■■□□ 2.47
SMARCD3-201ENST00000262188 SETD4Q9NVD3 440 aa30.48■■■□□ 2.47
SMARCD3-201ENST00000262188 LOXHD1Q8IVV2 1947 aa30.48■■■□□ 2.47
SMARCD3-201ENST00000262188 SLC20A2Q08357 652 aa30.48■■■□□ 2.47
SMARCD3-201ENST00000262188 RNF180Q86T96 592 aa30.48■■■□□ 2.47
SMARCD3-201ENST00000262188 GAS2L3Q86XJ1 694 aa30.48■■■□□ 2.47
SMARCD3-201ENST00000262188 DAW1Q8N136 415 aa30.48■■■□□ 2.47
SMARCD3-201ENST00000262188 TBC1D7Q9P0N9 293 aa30.48■■■□□ 2.47
SMARCD3-201ENST00000262188 HIP1RO75146 1068 aa30.47■■■□□ 2.47
SMARCD3-201ENST00000262188 BMP6P22004 513 aa30.47■■■□□ 2.47
SMARCD3-201ENST00000262188 POLGP54098 1239 aaPredicted RBP30.47■■■□□ 2.47
SMARCD3-201ENST00000262188 DRP2Q13474 957 aa30.47■■■□□ 2.47
SMARCD3-201ENST00000262188 SMYD4Q8IYR2 804 aaPredicted RBP30.47■■■□□ 2.47
SMARCD3-201ENST00000262188 MTG1Q9BT17 334 aaPredicted RBP30.47■■■□□ 2.47
SMARCD3-201ENST00000262188 PRDM10Q9NQV6 1147 aa30.47■■■□□ 2.47
SMARCD3-201ENST00000262188 HAS3O00219 553 aa30.46■■■□□ 2.47
SMARCD3-201ENST00000262188 SMIM10L2AP0DMW4 78 aa30.46■■■□□ 2.47
SMARCD3-201ENST00000262188 SMIM10L2BP0DMW5 78 aa30.46■■■□□ 2.47
SMARCD3-201ENST00000262188 CST5P28325 142 aaPredicted RBP30.46■■■□□ 2.47
SMARCD3-201ENST00000262188 PPFIA1Q13136 1202 aa30.46■■■□□ 2.47
SMARCD3-201ENST00000262188 MAPK7Q13164 816 aa30.46■■■□□ 2.47
SMARCD3-201ENST00000262188 PKN2Q16513 984 aaKnown RBP30.46■■■□□ 2.47
SMARCD3-201ENST00000262188 FAM102BQ5T8I3 360 aa30.46■■■□□ 2.47
SMARCD3-201ENST00000262188 TMEM143Q96AN5 459 aa30.46■■■□□ 2.47
SMARCD3-201ENST00000262188 SMC2O95347 1197 aa30.46■■■□□ 2.47
SMARCD3-201ENST00000262188 EMC2Q15006 297 aa30.46■■■□□ 2.47
SMARCD3-201ENST00000262188 LRRC71Q8N4P6 559 aa30.46■■■□□ 2.47
SMARCD3-201ENST00000262188 PDLIM7Q9NR12 457 aa30.46■■■□□ 2.47
SMARCD3-201ENST00000262188 PANK4Q9NVE7 773 aa30.46■■■□□ 2.47
SMARCD3-201ENST00000262188 ZNF200P98182 395 aaPredicted RBP30.45■■■□□ 2.47
SMARCD3-201ENST00000262188 GRIK4Q16099 956 aa30.45■■■□□ 2.47
SMARCD3-201ENST00000262188 NT5DC1Q5TFE4 455 aa30.45■■■□□ 2.47
SMARCD3-201ENST00000262188 GLIS3Q8NEA6 775 aa30.45■■■□□ 2.47
SMARCD3-201ENST00000262188 FGFBP2Q9BYJ0 223 aa30.45■■■□□ 2.47
SMARCD3-201ENST00000262188 LRRC27Q9C0I9 530 aa30.45■■■□□ 2.47
SMARCD3-201ENST00000262188 DHX33Q9H6R0 707 aaKnown RBP30.45■■■□□ 2.47
SMARCD3-201ENST00000262188 ZEB2O60315 1214 aa30.45■■■□□ 2.46
SMARCD3-201ENST00000262188 GUCY2CP25092 1073 aa30.45■■■□□ 2.46
SMARCD3-201ENST00000262188 ACLYP53396 1101 aa30.45■■■□□ 2.46
SMARCD3-201ENST00000262188 TBC1D8BQ0IIM8 1120 aa30.45■■■□□ 2.46
SMARCD3-201ENST00000262188 ARMC5Q96C12 935 aa30.45■■■□□ 2.46
SMARCD3-201ENST00000262188 SUGCTQ9HAC7 445 aa30.45■■■□□ 2.46
SMARCD3-201ENST00000262188 DGAT1O75907 488 aa30.44■■■□□ 2.46
SMARCD3-201ENST00000262188 COASYQ13057 564 aa30.44■■■□□ 2.46
SMARCD3-201ENST00000262188 NBPF20Q3BBV1 942 aa30.44■■■□□ 2.46
SMARCD3-201ENST00000262188 MARCH8Q5T0T0 291 aa30.44■■■□□ 2.46
SMARCD3-201ENST00000262188 UNC13DQ70J99 1090 aa30.44■■■□□ 2.46
SMARCD3-201ENST00000262188 LMBR1Q8WVP7 490 aa30.44■■■□□ 2.46
SMARCD3-201ENST00000262188 MCOLN1Q9GZU1 580 aa30.44■■■□□ 2.46
SMARCD3-201ENST00000262188 ATP6V0A4Q9HBG4 840 aa30.44■■■□□ 2.46
SMARCD3-201ENST00000262188 HDAC6Q9UBN7 1215 aa30.44■■■□□ 2.46
SMARCD3-201ENST00000262188 GDAQ9Y2T3 454 aa30.44■■■□□ 2.46
SMARCD3-201ENST00000262188 MYL1P05976 194 aa30.43■■■□□ 2.46
SMARCD3-201ENST00000262188 CNNM4Q6P4Q7 775 aa30.43■■■□□ 2.46
SMARCD3-201ENST00000262188 SFR1Q86XK3 245 aa30.43■■■□□ 2.46
SMARCD3-201ENST00000262188 GRIN2DO15399 1336 aa30.43■■■□□ 2.46
SMARCD3-201ENST00000262188 C22orf31O95567 290 aa30.43■■■□□ 2.46
SMARCD3-201ENST00000262188 GJB1P08034 283 aa30.43■■■□□ 2.46
SMARCD3-201ENST00000262188 KLRC1P26715 233 aa30.43■■■□□ 2.46
SMARCD3-201ENST00000262188 TYRO3Q06418 890 aa30.43■■■□□ 2.46
SMARCD3-201ENST00000262188 MKRN4PQ13434 485 aaPredicted RBP30.43■■■□□ 2.46
SMARCD3-201ENST00000262188 PCSK9Q8NBP7 692 aaKnown RBP30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms