RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 STK24Q9Y6E0 443 aa18.72■□□□□ 0.59
SDCBP-201ENST00000260130 CDY2AQ9Y6F7 541 aa18.72■□□□□ 0.59
SDCBP-201ENST00000260130 WDR81Q562E7 1941 aa18.71■□□□□ 0.59
SDCBP-201ENST00000260130 M0QZ92 97 aa18.71■□□□□ 0.59
SDCBP-201ENST00000260130 HAUS3Q68CZ6 603 aa18.71■□□□□ 0.59
SDCBP-201ENST00000260130 LRRC71Q8N4P6 559 aa18.71■□□□□ 0.59
SDCBP-201ENST00000260130 LINC01465Q8N7H1 131 aa18.71■□□□□ 0.59
SDCBP-201ENST00000260130 ZNF579Q8NAF0 562 aaKnown RBP18.71■□□□□ 0.59
SDCBP-201ENST00000260130 ZDHHC9Q9Y397 364 aa18.71■□□□□ 0.59
SDCBP-201ENST00000260130 CLIC4Q9Y696 253 aa18.71■□□□□ 0.59
SDCBP-201ENST00000260130 PRPF40AO75400 957 aaKnown RBP18.71■□□□□ 0.59
SDCBP-201ENST00000260130 MAFO75444 373 aaPredicted RBP18.71■□□□□ 0.59
SDCBP-201ENST00000260130 ZSCAN22P10073 491 aaPredicted RBP18.71■□□□□ 0.59
SDCBP-201ENST00000260130 ACTN1P12814 892 aa18.71■□□□□ 0.59
SDCBP-201ENST00000260130 CLCN3P51790 818 aa18.71■□□□□ 0.59
SDCBP-201ENST00000260130 XKR9Q5GH70 373 aa18.71■□□□□ 0.59
SDCBP-201ENST00000260130 ANKEF1Q9NU02 776 aa18.71■□□□□ 0.59
SDCBP-201ENST00000260130 LAMA2P24043 3122 aaKnown RBP18.71■□□□□ 0.59
SDCBP-201ENST00000260130 TANC1Q9C0D5 1861 aa18.7■□□□□ 0.58
SDCBP-201ENST00000260130 VWA3AA6NCI4 1184 aa18.7■□□□□ 0.58
SDCBP-201ENST00000260130 RASIP1Q5U651 963 aa18.7■□□□□ 0.58
SDCBP-201ENST00000260130 FOXD4L5Q5VV16 416 aaPredicted RBP18.7■□□□□ 0.58
SDCBP-201ENST00000260130 PIGOQ8TEQ8 1089 aa18.7■□□□□ 0.58
SDCBP-201ENST00000260130 FOXD4L4Q8WXT5 416 aaPredicted RBP18.7■□□□□ 0.58
SDCBP-201ENST00000260130 MAP7D2Q96T17 732 aa18.7■□□□□ 0.58
SDCBP-201ENST00000260130 JPH2Q9BR39 696 aaPredicted RBP18.7■□□□□ 0.58
SDCBP-201ENST00000260130 CELF4Q9BZC1 486 aaKnown RBP18.7■□□□□ 0.58
SDCBP-201ENST00000260130 OSBPL7Q9BZF2 842 aa18.7■□□□□ 0.58
SDCBP-201ENST00000260130 MTIF3Q9H2K0 278 aaKnown RBP18.7■□□□□ 0.58
SDCBP-201ENST00000260130 TRPV2Q9Y5S1 764 aa18.7■□□□□ 0.58
SDCBP-201ENST00000260130 TRIOBPQ9H2D6 2365 aa18.7■□□□□ 0.58
SDCBP-201ENST00000260130 IGKV6-21A0A0C4DH24 114 aa18.69■□□□□ 0.58
SDCBP-201ENST00000260130 MUTP22033 750 aa18.69■□□□□ 0.58
SDCBP-201ENST00000260130 CCT6AP40227 531 aaKnown RBP18.69■□□□□ 0.58
SDCBP-201ENST00000260130 LRIT3Q3SXY7 679 aa18.69■□□□□ 0.58
SDCBP-201ENST00000260130 CNKSR3Q6P9H4 555 aa18.69■□□□□ 0.58
SDCBP-201ENST00000260130 EXOC8Q8IYI6 725 aa18.69■□□□□ 0.58
SDCBP-201ENST00000260130 NACC1Q96RE7 527 aa18.69■□□□□ 0.58
SDCBP-201ENST00000260130 A0A087WWV3 80 aa18.69■□□□□ 0.58
SDCBP-201ENST00000260130 VTNP04004 478 aa18.69■□□□□ 0.58
SDCBP-201ENST00000260130 RFC5P40937 340 aa18.69■□□□□ 0.58
SDCBP-201ENST00000260130 DNM2P50570 870 aa18.69■□□□□ 0.58
SDCBP-201ENST00000260130 PLEKHG4Q58EX7 1191 aa18.69■□□□□ 0.58
SDCBP-201ENST00000260130 KRT79Q5XKE5 535 aa18.69■□□□□ 0.58
SDCBP-201ENST00000260130 DBF4BQ8NFT6 615 aa18.69■□□□□ 0.58
SDCBP-201ENST00000260130 SNX29Q8TEQ0 813 aa18.69■□□□□ 0.58
SDCBP-201ENST00000260130 SLC7A3Q8WY07 619 aa18.69■□□□□ 0.58
SDCBP-201ENST00000260130 DHX33Q9H6R0 707 aaKnown RBP18.69■□□□□ 0.58
SDCBP-201ENST00000260130 CXXC1Q9P0U4 656 aaPredicted RBP18.69■□□□□ 0.58
SDCBP-201ENST00000260130 AKT3Q9Y243 479 aa18.69■□□□□ 0.58
SDCBP-201ENST00000260130 KDM3AQ9Y4C1 1321 aa18.69■□□□□ 0.58
SDCBP-201ENST00000260130 SCN5AQ14524 2016 aa18.69■□□□□ 0.58
SDCBP-201ENST00000260130 PP2D1A8MPX8 630 aa18.68■□□□□ 0.58
SDCBP-201ENST00000260130 F13A1P00488 732 aa18.68■□□□□ 0.58
SDCBP-201ENST00000260130 GHRP10912 638 aa18.68■□□□□ 0.58
SDCBP-201ENST00000260130 CDC25AP30304 524 aa18.68■□□□□ 0.58
SDCBP-201ENST00000260130 POLGP54098 1239 aaPredicted RBP18.68■□□□□ 0.58
SDCBP-201ENST00000260130 CEBPZQ03701 1054 aaKnown RBP18.68■□□□□ 0.58
SDCBP-201ENST00000260130 MKRN4PQ13434 485 aaPredicted RBP18.68■□□□□ 0.58
SDCBP-201ENST00000260130 PTPAQ15257 358 aa18.68■□□□□ 0.58
SDCBP-201ENST00000260130 FBXO47Q5MNV8 452 aa18.68■□□□□ 0.58
SDCBP-201ENST00000260130 POTEGQ6S5H5 508 aa18.68■□□□□ 0.58
SDCBP-201ENST00000260130 USP28Q96RU2 1077 aa18.68■□□□□ 0.58
SDCBP-201ENST00000260130 SQORQ9Y6N5 450 aa18.68■□□□□ 0.58
SDCBP-201ENST00000260130 ZBBXA8MT70 800 aa18.68■□□□□ 0.58
SDCBP-201ENST00000260130 MBD3O95983 291 aa18.68■□□□□ 0.58
SDCBP-201ENST00000260130 LPIN1Q14693 890 aa18.68■□□□□ 0.58
SDCBP-201ENST00000260130 ZNF710Q8N1W2 664 aa18.68■□□□□ 0.58
SDCBP-201ENST00000260130 SEPT8Q92599 483 aa18.68■□□□□ 0.58
SDCBP-201ENST00000260130 CCDC43Q96MW1 224 aaKnown RBP18.68■□□□□ 0.58
SDCBP-201ENST00000260130 GINS2Q9Y248 185 aa18.68■□□□□ 0.58
SDCBP-201ENST00000260130 RBAK-RBAKDNI3L0D1 243 aa18.67■□□□□ 0.58
SDCBP-201ENST00000260130 BAIAP3O94812 1187 aa18.67■□□□□ 0.58
SDCBP-201ENST00000260130 RARRES1P49788 294 aa18.67■□□□□ 0.58
SDCBP-201ENST00000260130 DRP2Q13474 957 aa18.67■□□□□ 0.58
SDCBP-201ENST00000260130 IKBKEQ14164 716 aa18.67■□□□□ 0.58
SDCBP-201ENST00000260130 ECM1Q16610 540 aa18.67■□□□□ 0.58
SDCBP-201ENST00000260130 KIZQ2M2Z5 673 aa18.67■□□□□ 0.58
SDCBP-201ENST00000260130 TCTN1Q2MV58 587 aa18.67■□□□□ 0.58
SDCBP-201ENST00000260130 ZSCAN30Q86W11 494 aa18.67■□□□□ 0.58
SDCBP-201ENST00000260130 USP38Q8NB14 1042 aa18.67■□□□□ 0.58
SDCBP-201ENST00000260130 AK8Q96MA6 479 aa18.67■□□□□ 0.58
SDCBP-201ENST00000260130 IFIH1Q9BYX4 1025 aaKnown RBP18.67■□□□□ 0.58
SDCBP-201ENST00000260130 CDHR5Q9HBB8 845 aa18.67■□□□□ 0.58
SDCBP-201ENST00000260130 DBR1Q9UK59 544 aaKnown RBP18.67■□□□□ 0.58
SDCBP-201ENST00000260130 KIAA1024Q9UPX6 916 aa18.67■□□□□ 0.58
SDCBP-201ENST00000260130 GPR32O75388 356 aa18.66■□□□□ 0.58
SDCBP-201ENST00000260130 NLRP11P59045 1033 aaKnown RBP18.66■□□□□ 0.58
SDCBP-201ENST00000260130 HS1BP3Q53T59 392 aa18.66■□□□□ 0.58
SDCBP-201ENST00000260130 TSHZ1Q6ZSZ6 1077 aa18.66■□□□□ 0.58
SDCBP-201ENST00000260130 GPT2Q8TD30 523 aa18.66■□□□□ 0.58
SDCBP-201ENST00000260130 ZNF396Q96N95 335 aaPredicted RBP18.66■□□□□ 0.58
SDCBP-201ENST00000260130 PPP1R16BQ96T49 567 aa18.66■□□□□ 0.58
SDCBP-201ENST00000260130 MMTAG2Q9BU76 263 aaKnown RBP18.66■□□□□ 0.58
SDCBP-201ENST00000260130 SUCLA2Q9P2R7 463 aaPredicted RBP18.66■□□□□ 0.58
SDCBP-201ENST00000260130 ABHD14A-ACY1A0A1B0GW23 586 aa18.66■□□□□ 0.58
SDCBP-201ENST00000260130 CRYBB1P53674 252 aaPredicted RBP18.66■□□□□ 0.58
SDCBP-201ENST00000260130 CDC42EP1Q00587 391 aa18.66■□□□□ 0.58
SDCBP-201ENST00000260130 SLC4A7Q9Y6M7 1214 aa18.66■□□□□ 0.58
SDCBP-201ENST00000260130 GAS2O43903 313 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms