RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 CACNB1Q02641 598 aaPredicted RBP17.57■□□□□ 0.4
CCDC90B-201ENST00000260054 ITGA7Q13683 1181 aa17.57■□□□□ 0.4
CCDC90B-201ENST00000260054 CAVIN1Q6NZI2 390 aaKnown RBP17.57■□□□□ 0.4
CCDC90B-201ENST00000260054 DYMQ7RTS9 669 aa17.57■□□□□ 0.4
CCDC90B-201ENST00000260054 VTI1AQ96AJ9 217 aa17.57■□□□□ 0.4
CCDC90B-201ENST00000260054 C7orf25Q9BPX7 421 aa17.57■□□□□ 0.4
CCDC90B-201ENST00000260054 STARD7Q9NQZ5 370 aa17.57■□□□□ 0.4
CCDC90B-201ENST00000260054 PPME1Q9Y570 386 aa17.57■□□□□ 0.4
CCDC90B-201ENST00000260054 GTPBP6O43824 516 aaPredicted RBP17.56■□□□□ 0.4
CCDC90B-201ENST00000260054 MAFO75444 373 aaPredicted RBP17.56■□□□□ 0.4
CCDC90B-201ENST00000260054 C22orf31O95567 290 aa17.56■□□□□ 0.4
CCDC90B-201ENST00000260054 GUCY2CP25092 1073 aa17.56■□□□□ 0.4
CCDC90B-201ENST00000260054 RFC5P40937 340 aa17.56■□□□□ 0.4
CCDC90B-201ENST00000260054 POLGP54098 1239 aaPredicted RBP17.56■□□□□ 0.4
CCDC90B-201ENST00000260054 ADAM17P78536 824 aa17.56■□□□□ 0.4
CCDC90B-201ENST00000260054 TBC1D8BQ0IIM8 1120 aa17.56■□□□□ 0.4
CCDC90B-201ENST00000260054 EMC2Q15006 297 aa17.56■□□□□ 0.4
CCDC90B-201ENST00000260054 DIS3LQ8TF46 1054 aaKnown RBP17.56■□□□□ 0.4
CCDC90B-201ENST00000260054 DNAJC19Q96DA6 116 aa17.56■□□□□ 0.4
CCDC90B-201ENST00000260054 CCDC34Q96HJ3 373 aa17.56■□□□□ 0.4
CCDC90B-201ENST00000260054 REEP2Q9BRK0 252 aa17.56■□□□□ 0.4
CCDC90B-201ENST00000260054 LRRC27Q9C0I9 530 aa17.56■□□□□ 0.4
CCDC90B-201ENST00000260054 ATP6V0A4Q9HBG4 840 aa17.56■□□□□ 0.4
CCDC90B-201ENST00000260054 POLD4Q9HCU8 107 aa17.56■□□□□ 0.4
CCDC90B-201ENST00000260054 KCND2Q9NZV8 630 aa17.56■□□□□ 0.4
CCDC90B-201ENST00000260054 IGKV6-21A0A0C4DH24 114 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 C17orf102A2RUQ5 167 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 RRN3P2A6NIE6 340 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 KLRC1P26715 233 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 SOX10P56693 466 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 ZNF200P98182 395 aaPredicted RBP17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 DPYDQ12882 1025 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 GIT2Q14161 759 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 FAM47CQ5HY64 1035 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 NFRKBQ6P4R8 1299 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 MTHFD1LQ6UB35 978 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 MAEAQ7L5Y9 396 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 SESTD1Q86VW0 696 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 SLC7A3Q8WY07 619 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 GPRC5CQ9NQ84 441 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 GTF2IRD1Q9UHL9 959 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 MBLAC1A4D2B0 266 aaPredicted RBP17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 RSPH10B2B2RC85 870 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 MYL1P05976 194 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 RSPH10BP0C881 870 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 MAPK7Q13164 816 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 CCDC183Q5T5S1 534 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 GDF6Q6KF10 455 aaPredicted RBP17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 CNNM4Q6P4Q7 775 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 DAW1Q8N136 415 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 ANKLE1Q8NAG6 615 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 SLC43A3Q8NBI5 491 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 HOOK1Q9UJC3 728 aaKnown RBP17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 TUBE1Q9UJT0 475 aa17.55■□□□□ 0.4
CCDC90B-201ENST00000260054 A0A0U1RQG5 324 aaPredicted RBP17.54■□□□□ 0.4
CCDC90B-201ENST00000260054 TREHO43280 583 aa17.54■□□□□ 0.4
CCDC90B-201ENST00000260054 HIP1RO75146 1068 aa17.54■□□□□ 0.4
CCDC90B-201ENST00000260054 KRT18P05783 430 aaKnown RBP17.54■□□□□ 0.4
CCDC90B-201ENST00000260054 COL6A1P12109 1028 aa17.54■□□□□ 0.4
CCDC90B-201ENST00000260054 ASIC1P78348 528 aa17.54■□□□□ 0.4
CCDC90B-201ENST00000260054 MKRN4PQ13434 485 aaPredicted RBP17.54■□□□□ 0.4
CCDC90B-201ENST00000260054 DRP2Q13474 957 aa17.54■□□□□ 0.4
CCDC90B-201ENST00000260054 LRRC71Q8N4P6 559 aa17.54■□□□□ 0.4
CCDC90B-201ENST00000260054 SENP6Q9GZR1 1112 aaPredicted RBP17.54■□□□□ 0.4
CCDC90B-201ENST00000260054 SUGCTQ9HAC7 445 aa17.54■□□□□ 0.4
CCDC90B-201ENST00000260054 PCDHA5Q9Y5H7 936 aa17.54■□□□□ 0.4
CCDC90B-201ENST00000260054 KAT6AQ92794 2004 aa17.53■□□□□ 0.4
CCDC90B-201ENST00000260054 MAGEB2O15479 319 aa17.53■□□□□ 0.4
CCDC90B-201ENST00000260054 KLRC4O43908 158 aa17.53■□□□□ 0.4
CCDC90B-201ENST00000260054 FAM102BQ5T8I3 360 aa17.53■□□□□ 0.4
CCDC90B-201ENST00000260054 EFCAB12Q6NXP0 572 aa17.53■□□□□ 0.4
CCDC90B-201ENST00000260054 LINC01465Q8N7H1 131 aa17.53■□□□□ 0.4
CCDC90B-201ENST00000260054 MCPH1Q8NEM0 835 aa17.53■□□□□ 0.4
CCDC90B-201ENST00000260054 SPATA20Q8TB22 786 aa17.53■□□□□ 0.4
CCDC90B-201ENST00000260054 TMEM143Q96AN5 459 aa17.53■□□□□ 0.4
CCDC90B-201ENST00000260054 SFI1A8K8P3 1242 aa17.52■□□□□ 0.4
CCDC90B-201ENST00000260054 ARVCFO00192 962 aa17.52■□□□□ 0.4
CCDC90B-201ENST00000260054 GNAT1P11488 350 aa17.52■□□□□ 0.4
CCDC90B-201ENST00000260054 IDEP14735 1019 aa17.52■□□□□ 0.4
CCDC90B-201ENST00000260054 CLCN3P51790 818 aa17.52■□□□□ 0.4
CCDC90B-201ENST00000260054 EXOC8Q8IYI6 725 aa17.52■□□□□ 0.4
CCDC90B-201ENST00000260054 METTL13Q8N6R0 699 aa17.52■□□□□ 0.4
CCDC90B-201ENST00000260054 SYAP1Q96A49 352 aaPredicted RBP17.52■□□□□ 0.4
CCDC90B-201ENST00000260054 CTAGE1Q96RT6 745 aa17.52■□□□□ 0.4
CCDC90B-201ENST00000260054 JPH2Q9BR39 696 aaPredicted RBP17.52■□□□□ 0.4
CCDC90B-201ENST00000260054 TIPINQ9BVW5 301 aa17.52■□□□□ 0.4
CCDC90B-201ENST00000260054 ODF2LQ9ULJ1 636 aa17.52■□□□□ 0.4
CCDC90B-201ENST00000260054 TRIP12Q14669 1992 aaPredicted RBP17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 MKI67P46013 3256 aaKnown RBP17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 FRMD3A2A2Y4 597 aa17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 GAS2O43903 313 aaKnown RBP17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 RPN1P04843 607 aaKnown RBP17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 CAPN2P17655 700 aa17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 EN2P19622 333 aaPredicted RBP17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 SARSP49591 514 aaKnown RBP17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 ZNF131P52739 623 aa17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 PTPN11Q06124 597 aaPredicted RBP17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 RUFY4Q6ZNE9 571 aa17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 RBM43Q6ZSC3 357 aaKnown RBP17.52■□□□□ 0.39
CCDC90B-201ENST00000260054 UNC13DQ70J99 1090 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms