RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 CAND2O75155 1236 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 CIB2O75838 187 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 TRAPPC10P48553 1259 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 SLC29A2Q14542 456 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 RAB3IPQ96QF0 476 aaPredicted RBP16.03■□□□□ 0.16
KCTD3-201ENST00000259154 TTC1Q99614 292 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 AGTPBP1Q9UPW5 1226 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 COL14A1Q05707 1796 aaKnown RBP16.03■□□□□ 0.16
KCTD3-201ENST00000259154 LRP6O75581 1613 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 CAMTA2O94983 1202 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 STAT3P40763 770 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 CUL1Q13616 776 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 PKN1Q16512 942 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 ISLR2Q6UXK2 745 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 GSDMBQ8TAX9 411 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 SPIRE2Q8WWL2 714 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 PSTPIP2Q9H939 334 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 POTEB3A0JP26 581 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 POTECB2RU33 542 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 MDH1BQ5I0G3 518 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 SYCP2LQ5T4T6 812 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 POTEBQ6S5H4 581 aa16.03■□□□□ 0.16
KCTD3-201ENST00000259154 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.03■□□□□ 0.16
KCTD3-201ENST00000259154 A0A1W2PQC6 194 aa16.02■□□□□ 0.16
KCTD3-201ENST00000259154 GOLGA8RI6L899 631 aa16.02■□□□□ 0.16
KCTD3-201ENST00000259154 DDAH1O94760 285 aa16.02■□□□□ 0.16
KCTD3-201ENST00000259154 DYNLT1P63172 113 aa16.02■□□□□ 0.16
KCTD3-201ENST00000259154 PAPD7Q5XG87 772 aaKnown RBP16.02■□□□□ 0.16
KCTD3-201ENST00000259154 VCPKMTQ9H867 229 aa16.02■□□□□ 0.16
KCTD3-201ENST00000259154 REXO2Q9Y3B8 237 aaKnown RBP16.02■□□□□ 0.16
KCTD3-201ENST00000259154 AFPP02771 609 aaKnown RBP16.02■□□□□ 0.16
KCTD3-201ENST00000259154 TRIM49P0CI25 452 aa16.02■□□□□ 0.16
KCTD3-201ENST00000259154 TRIM49CP0CI26 452 aa16.02■□□□□ 0.16
KCTD3-201ENST00000259154 ATF2P15336 505 aa16.02■□□□□ 0.16
KCTD3-201ENST00000259154 SCNN1DP51172 638 aa16.02■□□□□ 0.16
KCTD3-201ENST00000259154 SMTNP53814 917 aa16.02■□□□□ 0.16
KCTD3-201ENST00000259154 GLE1Q53GS7 698 aaKnown RBP16.02■□□□□ 0.16
KCTD3-201ENST00000259154 CEP128Q6ZU80 1094 aa16.02■□□□□ 0.16
KCTD3-201ENST00000259154 SDCCAG8Q86SQ7 713 aaPredicted RBP16.02■□□□□ 0.16
KCTD3-201ENST00000259154 C9orf72Q96LT7 481 aa16.02■□□□□ 0.16
KCTD3-201ENST00000259154 TGS1Q96RS0 853 aaKnown RBP16.02■□□□□ 0.16
KCTD3-201ENST00000259154 RNF14Q9UBS8 474 aa16.02■□□□□ 0.16
KCTD3-201ENST00000259154 DOK7Q18PE1 504 aa16.02■□□□□ 0.15
KCTD3-201ENST00000259154 PDXDC1Q6P996 788 aa16.02■□□□□ 0.15
KCTD3-201ENST00000259154 DPP8Q6V1X1 898 aaPredicted RBP16.02■□□□□ 0.15
KCTD3-201ENST00000259154 TRPM8Q7Z2W7 1104 aa16.02■□□□□ 0.15
KCTD3-201ENST00000259154 CREG2Q8IUH2 290 aa16.02■□□□□ 0.15
KCTD3-201ENST00000259154 SPICE1Q8N0Z3 855 aa16.02■□□□□ 0.15
KCTD3-201ENST00000259154 NUP98P52948 1817 aa16.02■□□□□ 0.15
KCTD3-201ENST00000259154 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.01■□□□□ 0.15
KCTD3-201ENST00000259154 ZNF233A6NK53 670 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 CCT8L1PA6NM43 557 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 RASA4BC9J798 803 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 EPHB6O15197 1021 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 RASA4O43374 803 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 KCNB1Q14721 858 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 AMIGO3Q86WK7 504 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 ZNF653Q96CK0 615 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 RBM17Q96I25 401 aaKnown RBP16.01■□□□□ 0.15
KCTD3-201ENST00000259154 CNOT10Q9H9A5 744 aaKnown RBP16.01■□□□□ 0.15
KCTD3-201ENST00000259154 PASKQ96RG2 1323 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.01■□□□□ 0.15
KCTD3-201ENST00000259154 GOLGA8IPA6NC78 632 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 GOLGA8JA6NMD2 632 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 USP17L15C9J2P7 530 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 USP17L13C9JLJ4 530 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 USP17L11C9JVI0 530 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 USP17L18D6R9N7 530 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 USP17L22D6RA61 530 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 USP17L17D6RBQ6 530 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 USP17L19D6RCP7 530 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 USP17L20D6RJB6 530 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 NTSR2O95665 410 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 USP17L24Q0WX57 530 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 USP17L6PQ6QN14 398 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 MMGT1Q8N4V1 131 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 SPDYE1Q8NFV5 336 aaPredicted RBP16.01■□□□□ 0.15
KCTD3-201ENST00000259154 PBKQ96KB5 322 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 BHMT2Q9H2M3 363 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 DLGAP2Q9P1A6 1054 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 SCOCQ9UIL1 159 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 COL1A1P02452 1464 aaPredicted RBP16.01■□□□□ 0.15
KCTD3-201ENST00000259154 ITIH6Q6UXX5 1313 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 PCNTO95613 3336 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 SPEF2Q9C093 1822 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 TROVE2P10155 538 aaKnown RBP eCLIP16.01■□□□□ 0.15
KCTD3-201ENST00000259154 ATP2A2P16615 1042 aaKnown RBP16.01■□□□□ 0.15
KCTD3-201ENST00000259154 FAM178BQ8IXR5 827 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 FUKQ8N0W3 1084 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.01■□□□□ 0.156e-6■□□□□ 9.2
KCTD3-201ENST00000259154 PHF20Q9BVI0 1012 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 ZCWPW1Q9H0M4 648 aa16.01■□□□□ 0.15
KCTD3-201ENST00000259154 UBE2TQ9NPD8 197 aaPredicted RBP16.01■□□□□ 0.15
KCTD3-201ENST00000259154 CFAP69A5D8W1 941 aa16■□□□□ 0.15
KCTD3-201ENST00000259154 MYMKA6NI61 221 aa16■□□□□ 0.15
KCTD3-201ENST00000259154 TRPA1O75762 1119 aa16■□□□□ 0.15
KCTD3-201ENST00000259154 AP1G2O75843 785 aa16■□□□□ 0.15
KCTD3-201ENST00000259154 UBOX5O94941 541 aa16■□□□□ 0.15
KCTD3-201ENST00000259154 PLA2G4BP0C869 781 aa16■□□□□ 0.15
KCTD3-201ENST00000259154 SERPINB6P35237 376 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms